trnae-cuc-280


Basic Information

Item Value
gene id trnae-cuc-280
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 1715837 ~ 1715908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnae-cuc-280
tccctggtggtctagtggttaggattcggcgctctcaccgccgcggcccgggttcgattcccggtcagggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc-280 True 72 mRNA 0.65 1 1715837 1715908

Neighbor

gene id symbol gene type direction distance location
trnae-cuc-279 NA coding upstream 111 1715655 ~ 1715726 (+)
trnae-cuc-278 NA coding upstream 2134 1713632 ~ 1713703 (+)
trnae-cuc-277 NA coding upstream 2315 1713452 ~ 1713522 (+)
trnae-cuc-276 NA coding upstream 2495 1713271 ~ 1713342 (+)
trnae-cuc-275 NA coding upstream 3537 1712229 ~ 1712300 (+)
trnae-cuc-281 NA coding downstream 110 1716018 ~ 1716089 (+)
trnaq-cug-118 NA coding downstream 103993 1819901 ~ 1819972 (+)
LOC118941531 LOC105006014 coding downstream 114636 1830544 ~ 1849336 (+)
LOC110497256 NA coding downstream 159724 1875632 ~ 1876316 (+)
LOC118941409 NA coding downstream 438663 1942489 ~ 2163262 (+)
G1582802 NA non-coding upstream 49324 1666242 ~ 1666513 (+)
G1582794 NA non-coding upstream 59009 1628276 ~ 1656828 (+)
G1582793 NA non-coding upstream 92590 1622980 ~ 1623247 (+)
G1582403 NA non-coding upstream 101217 1614346 ~ 1614620 (+)
G1582402 NA non-coding upstream 104366 1610943 ~ 1611471 (+)
G1582807 NA non-coding downstream 6902 1722810 ~ 1778987 (+)
G1582805 NA non-coding downstream 10702 1726610 ~ 1755116 (+)
G1582823 NA non-coding downstream 32508 1748416 ~ 1764771 (+)
G1582835 NA non-coding downstream 70999 1786907 ~ 1789412 (+)
G1582838 NA non-coding downstream 88944 1804852 ~ 1813655 (+)
LOC118941396 LOC106602234 other upstream 114104 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 151168 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 757391 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 1664646 48513 ~ 51819 (+)
G1583003 NA other downstream 483020 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 1081195 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1097966 2765199 ~ 2815294 (+)
LOC118941397 LOC106601386 other downstream 1173118 2888963 ~ 3003056 (+)
LOC110517772 LOC106610548 other downstream 1316611 3032473 ~ 3091701 (+)

Expression


Co-expression Network