LOC118941408


Basic Information

Item Value
gene id LOC118941408
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2737086 ~ 2770154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037626.1
ggaggtagcctTGTTGAGTGAGTGAAGATTAATGTCGCGCTTTTCCCGTGCACGCACCTGCCTTGGGACTAGACTCCACCGGAGCTGCCTCACATTTGAACTGGAAAACCTTGCGCGTGTCGGTGTATCTGGATTAACGGAATGGATTAGAGATCTAAGAACGCCCCTTTCCCATGTCGGAGGAGATGAAGAAGCagcaccctcctcttcctcaccaggatgtccagagagagatcagagaggggGAGTAACTGGGGATACACCATGATGGAGCCCTGATACAGAGGACAGAGCAcagTTAAATGGAGGAGCGGGACAGAAGCCGCTCCCCGTCCCGCAGGACAAGTCGGGTGGAGCAGGTGGTGGGGCGATGGCTACGACGCTCCAGGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037626.1 True 392 mRNA 0.56 3 2737086 2770154

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 573824 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 860770 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 887750 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 917114 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 1020997 1716018 ~ 1716089 (+)
LOC110518136 LOC106592283 coding downstream 139 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 118809 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 136663 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 229668 2951647 ~ 3001920 (+)
LOC110517772 LOC106610548 coding downstream 262319 3032473 ~ 3091701 (+)
G1583039 NA non-coding upstream 2939 2705981 ~ 2734147 (+)
G1583212 NA non-coding upstream 6359 2729831 ~ 2730727 (+)
G1583163 NA non-coding upstream 23747 2518122 ~ 2713339 (+)
G1583201 NA non-coding upstream 26849 2680563 ~ 2710237 (+)
G1583120 NA non-coding upstream 32656 2351645 ~ 2704430 (+)
G1583238 NA non-coding downstream 20427 2790581 ~ 2791419 (+)
G1583241 NA non-coding downstream 27130 2797284 ~ 2798738 (+)
G1583243 NA non-coding downstream 56672 2826826 ~ 2831680 (+)
G1583261 LOC106601384 non-coding downstream 106273 2876427 ~ 2983911 (+)
G1583129 NA non-coding downstream 123851 2894005 ~ 2894563 (+)
G1583003 NA other upstream 536213 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1135353 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1172417 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1778640 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2685895 48513 ~ 51819 (+)
G1583215 NA other downstream 43720 2765199 ~ 2815294 (+)
LOC110534752 LOC106602173 other downstream 662562 3416203 ~ 3445744 (+)

Expression


Co-expression Network