LOC110511406 (LOC106588734)


Basic Information

Item Value
gene id LOC110511406
gene name LOC106588734
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3136648 ~ 3139833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953932.1
gagagagagagagagagagagagagagagagagagagagagagagagagagaacatcacaGATAGTTTCTCATTCAGCTCGAGGAAGAAACAGCCCAGCCGCACATCGCGGTTTGAGTGACACAGATACCGGTTTACATTTACAGGTTTACAGCACAGACGGAGCGAGAGATTGGAACcgagagggatagacagggagagagagatataatggaAAGAGTGGAGAAATAAATATTggattaataaaaataaaaaatacaccaACGGAGGACTATTTTTTCGCCTCTCACATGAATGGGAACAGCGGGATACGATATGGAGTCTCGTGAGCTATTTTCTCAGTGTGTTTGATTGACACACTTTTCCCACCGCTGAACATCTGACGGTGGAAGGGACGAGGCCATGCATAACGCCAGCCACCGCCTGGCAGAGAACCAGAGCGAGCCTCATCTGCCCGAGCCACACGCGGATTTACCCGCCACTCGCGCGCTCGTCGGCTGCGTCCTCTCACTGCTCATCCTCTGGACGTTACTGGGTAACTTCACGGTGTGCGCGGCGGTTCTGCGTTACCGGCACCTGCGCGCCAAAGTCACCAACATCTTCATCGTGTCCCTGGCGCTGTCGGACCTCCTCGTGGCGCTGCTCGTGATGCCGTGGAAGgcgGCGGCAGAGGTGGCGGGGTTCTGGCCCTTCGGTGCGTTCTGTGACACCTGGGTGGCGAGCGACATCATGTGTTCCACGGCGTCCATCTTGAATCTGTGCATGATCAGTGTGGACCGCTACTGGGCGATATCCAGCCCATTCCGTTACGAGAGGAGAATGAACCGCCGCGTGGCCTTCGTCATGGTCGGCGTGACCTGGACGGTCTCCGTGATGATATCATTTGTGCCCGTTCAACTCCACTGGCACCGGGCTGCGATCACCGGAAACGCCGGGAGCGGTGACGAATTTAACCGGGACGTTACCTGGTTTAACGTCAGTGGGGTGTATCAACTCCGCAGGGCCTCGGAGGAGGTGAACGGCTGGAACTGTGACTCAAGTCTGAGTCGGACCTACGCCATCTCCTCCTCGTTGATCAGTTTCTACATCCCCGTGGCGATCATGGTGGTCACCTACACACGGATCTACCGGATCGCCCAGGTCCAGATACGCAGGATATCCTCCCTGGAGCGAGCCGCAGAACACGCACAGAACTGCCGCTCGGACCCGCACGTGGATGTGGATGCAGATGGGCACGTGCACGCTTTCCACCATCGTCATCCTCCTCTTCGTTCTAAACACCGTTGCTCCATCTTTCACCAAACGACCCcgaaacatcatcatcatcaccctgaTCTTCCTCCTCAACACCGGGCCCTGAGGTACTCCATTAGGAAGGAAACCAAGGTTCTGAAGACTCTGTCTGTCATCATGGGGGTCTTCGTCTTCTGCTGGTCCCCCTTCTTCATCCTCAACTGTGCCATGCCCTTCTGCCCAGGTCCAGGTACAGCCTCTAGAACTGTGTCAGACCCCTCGTCCCAATCCTCCCACCTGTACTGTGTCAGTGAAACCACCTTCGACGTCTTCGTGTGGTTCGGTTGGAGCAACTCTTCCTTAAACCCCGTTATCTACGCCTTCAACACTGAGTTCCGCGAGGCGTTCCTCCGCTTGCTGGGTTGCCGTGGGGACAACGGGTGCTTTGGCGGCTGGACGACGAGTGCCACGCGCGTGGAGAGCGTGGTCTTGGCGAGCAACGACGCCGCCGGGAAGGAGAAGAAGAACTCGCTCTTCGCAACGGAGATGGGCGTGGCTTACGATACCGGCTGTGCCGCCGGTAGAGGTAGTGTCACATCTGGTGTAATCCGCGACCCGGTTAGAGGGAGGGTGCTACCGACACCGTTAACGGACCGTAGAGGAGCTGTAGAGGAGCCGCTGTGTGACTGTGAGGTGGACCCGGTTAGAGGGAGAGGGGACAGCGGGGCAGGTCTCTCTAGGATGCCACCGGCAACGTTAACGAACCGTAGAGGGACGATAACACAACCAGAGGCGGAGTGCGACTGTCCCGCGGAGGATTGTAAAAGAGAAGCAGCGGACCGGGGACAACGGACTCAAATGATTCCCTCACAAACTTTCTGATTAACTTTCAAACTGTGCCAAACTGACCGTACCGTTGATGTCTGTAGTCGTTTCATTTCAAATGAATCCACAACTTGTACTGTCTCAGCTGTTCATGGATCACATTCATCCAGGAAATAGCTATGACAGGTTTATCCAAAACATTCATTGGACAATTTGATGAAAAAGCATTTGAGGATTGATTGAAACAGGGCCATTTCCCACCAATGCTCTAGGCTAAGGTTTCTCCAGCTCTCGTTCCTGAACCCACAAAAGCTCTGTAATATGTTGTTGATCTGACCTGTTTTTATGGAAGTGGTGCCTCAAGGAGAAAAGGATATTAATAGTAATGgtaatgatagtaatgatagtaatgatagtaatgatagtaacgatagtaatgatag

Function

NR:

description
PREDICTED: D(1) dopamine receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953932.1 True 2500 mRNA 0.54 3 3136648 3139833

Neighbor

gene id symbol gene type direction distance location
LOC110510463 LOC106590758 coding upstream 7850 3105399 ~ 3128798 (+)
LOC110517772 LOC106610548 coding upstream 44947 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 coding upstream 133592 2888963 ~ 3003056 (+)
LOC118941407 LOC106591540 coding upstream 135792 2951647 ~ 3001920 (+)
LOC118941401 LOC106609853 coding upstream 227734 2906817 ~ 2909482 (+)
trnae-cuc-282 NA coding downstream 82085 3221918 ~ 3221989 (+)
trnae-cuc-283 NA coding downstream 82266 3222099 ~ 3222170 (+)
trnae-cuc-284 NA coding downstream 83480 3223313 ~ 3223384 (+)
trnae-cuc-285 NA coding downstream 83662 3223495 ~ 3223566 (+)
trnae-cuc-286 NA coding downstream 84438 3224271 ~ 3224342 (+)
G1583658 NA non-coding upstream 22384 3113982 ~ 3114264 (+)
G1583655 NA non-coding upstream 31842 3104490 ~ 3104806 (+)
G1583653 NA non-coding upstream 35627 3097603 ~ 3101021 (+)
G1583648 NA non-coding upstream 39429 3095425 ~ 3097219 (+)
G1583675 NA non-coding downstream 14046 3153879 ~ 3154202 (+)
G1583686 NA non-coding downstream 52059 3191892 ~ 3193229 (+)
G1583783 NA non-coding downstream 150424 3290257 ~ 3290466 (+)
LOC110534750 ma7d1 non-coding downstream 173226 3309693 ~ 3314825 (+)
G1583811 NA non-coding downstream 183749 3323582 ~ 3372508 (+)
G1583215 NA other upstream 321354 2765199 ~ 2815294 (+)
LOC110518136 LOC106592283 other upstream 333217 2770293 ~ 2811692 (+)
G1583003 NA other upstream 935775 2198928 ~ 2200873 (+)
LOC110534752 LOC106602173 other downstream 292883 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 343813 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 478005 3609578 ~ 3622792 (+)
G1583951 NA other downstream 500816 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 548335 3687991 ~ 3692012 (+)

Expression


Co-expression Network