trnae-cuc-301



Basic Information


Item Value
gene id trnae-cuc-301
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3234250 ~ 3234321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnae-cuc-301
tccctggtggtctagtggttaggattcggcgctctcaccgccgtggcccgggttcgattcccggtcagggaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnae-cuc-301 True 72 mRNA 0.64 1 3234250 3234321

Neighbor


gene id symbol gene type direction distance location
trnae-cuc-300 NA coding upstream 110 3234069 ~ 3234140 (+)
trnae-cuc-299 NA coding upstream 931 3233248 ~ 3233319 (+)
trnae-cuc-298 NA coding upstream 1112 3233067 ~ 3233138 (+)
trnae-cuc-297 NA coding upstream 2950 3231229 ~ 3231300 (+)
trnae-cuc-296 NA coding upstream 3131 3231048 ~ 3231119 (+)
trnae-cuc-302 NA coding downstream 750 3235071 ~ 3235142 (+)
trnae-cuc-303 NA coding downstream 931 3235252 ~ 3235323 (+)
trnae-cuc-304 NA coding downstream 1973 3236294 ~ 3236365 (+)
trnae-cuc-305 NA coding downstream 2154 3236475 ~ 3236545 (+)
trnae-cuc-306 NA coding downstream 2334 3236655 ~ 3236726 (+)
G1583686 NA non-coding upstream 41021 3191892 ~ 3193229 (+)
G1583675 NA non-coding upstream 80048 3153879 ~ 3154202 (+)
LOC110510463 LOC106590758 non-coding upstream 114356 3105399 ~ 3128798 (+)
G1583658 NA non-coding upstream 119986 3113982 ~ 3114264 (+)
G1583655 NA non-coding upstream 129444 3104490 ~ 3104806 (+)
G1583783 NA non-coding downstream 55936 3290257 ~ 3290466 (+)
LOC110534750 ma7d1 non-coding downstream 78738 3309693 ~ 3314825 (+)
G1583811 NA non-coding downstream 89261 3323582 ~ 3372508 (+)
LOC118941411 NA non-coding downstream 117507 3349758 ~ 3355397 (+)
G1583817 NA non-coding downstream 128330 3362651 ~ 3363004 (+)
LOC110517772 LOC106610548 other upstream 162607 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 343444 2888963 ~ 3003056 (+)
G1583215 NA other upstream 418956 2765199 ~ 2815294 (+)
LOC110518136 LOC106592283 other upstream 430819 2770293 ~ 2811692 (+)
G1583003 NA other upstream 1033377 2198928 ~ 2200873 (+)
LOC110534752 LOC106602173 other downstream 198395 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 249325 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 383517 3609578 ~ 3622792 (+)
G1583951 NA other downstream 406328 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 453847 3687991 ~ 3692012 (+)

Expression



Co-expression Network