LOC110515142 (LOC106602209)


Basic Information

Item Value
gene id LOC110515142
gene name LOC106602209
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4448502 ~ 4451077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955462.1
ATGGCTTGTTTCTGCTGGTGCAAAAAGAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGTTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATTCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGatcTCTGTCTCTTCAGGAACACTCTAGTCCAACGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGTCGTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTTAGGTCTACCTGGCAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGTAACTGAGGCACTACTCTCTTGTGTACGAGTGCTCTTCTTGCAATGGTTCATTTTCTCTTTTTAA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955462.1 True 909 mRNA 0.53 5 4448502 4451077

Neighbor

gene id symbol gene type direction distance location
LOC118941534 LOC106595337 coding upstream 6496 4435807 ~ 4442006 (+)
LOC118941418 LOC106602209 coding upstream 24817 4418701 ~ 4423685 (+)
LOC118941417 LOC106595337 coding upstream 43574 4400660 ~ 4404928 (+)
LOC118941416 LOC106595337 coding upstream 63367 4380122 ~ 4385135 (+)
LOC110534570 sgcz coding upstream 219138 3912487 ~ 4229364 (+)
LOC110514540 LOC106610365 coding downstream 53 4451130 ~ 4453904 (+)
LOC110512119 LOC106595337 coding downstream 58098 4509175 ~ 4512950 (+)
LOC110514758 LOC106595337 coding downstream 94884 4545961 ~ 4551255 (+)
LOC118941536 LOC106610423 coding downstream 120667 4571744 ~ 4599810 (+)
LOC110534951 LOC106602209 coding downstream 154620 4605697 ~ 4610263 (+)
G1584673 NA non-coding upstream 117121 4331083 ~ 4331381 (+)
G1584668 NA non-coding upstream 119090 4329195 ~ 4329412 (+)
G1584661 NA non-coding upstream 124445 4323611 ~ 4324057 (+)
G1584722 NA non-coding downstream 2921 4453998 ~ 4552127 (+)
G1584731 NA non-coding downstream 35823 4486900 ~ 4487735 (+)
G1584698 LOC108260735 non-coding downstream 69840 4520917 ~ 4800849 (+)
G1584760 NA non-coding downstream 140744 4591821 ~ 4592094 (+)
G1584344 NA other upstream 385276 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 757518 3687991 ~ 3692012 (+)
G1583951 NA other upstream 805626 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 825714 3609578 ~ 3622792 (+)
LOC110497289 LOC106610394 other upstream 963082 3483359 ~ 3492477 (+)
G1584899 NA other downstream 670914 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 979220 5428914 ~ 5491185 (+)
G1585375 NA other downstream 997399 5448476 ~ 5448938 (+)
G1585483 NA other downstream 1192679 5643756 ~ 5715375 (+)

Expression


Co-expression Network