LOC110512119 (LOC106595337)


Basic Information

Item Value
gene id LOC110512119
gene name LOC106595337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4509175 ~ 4512950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953993.1
CCAGTCTCAGCCACCAGAAACATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAATGCCACCCTGCAGTGCCTCCTGGTCCTGTCGTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCAGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCAAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGTAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGTACTGTTTACTCTCGCCATCTATATTATTGTGTTG

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953993.1 True 1242 mRNA 0.55 9 4509175 4512950

Neighbor

gene id symbol gene type direction distance location
LOC110514540 LOC106610365 coding upstream 55271 4451130 ~ 4453904 (+)
LOC110515142 LOC106602209 coding upstream 58098 4448502 ~ 4451077 (+)
LOC118941534 LOC106595337 coding upstream 67169 4435807 ~ 4442006 (+)
LOC118941418 LOC106602209 coding upstream 85490 4418701 ~ 4423685 (+)
LOC118941417 LOC106595337 coding upstream 104247 4400660 ~ 4404928 (+)
LOC110514758 LOC106595337 coding downstream 33011 4545961 ~ 4551255 (+)
LOC118941536 LOC106610423 coding downstream 58794 4571744 ~ 4599810 (+)
LOC110534951 LOC106602209 coding downstream 92747 4605697 ~ 4610263 (+)
LOC110533205 LOC106595337 coding downstream 108191 4621141 ~ 4626449 (+)
LOC118941419 LOC106597769 coding downstream 113621 4626571 ~ 4628355 (+)
G1584731 NA non-coding upstream 21440 4486900 ~ 4487735 (+)
G1584673 NA non-coding upstream 177794 4331083 ~ 4331381 (+)
G1584668 NA non-coding upstream 179763 4329195 ~ 4329412 (+)
G1584698 LOC108260735 non-coding downstream 7967 4520917 ~ 4800849 (+)
G1584760 NA non-coding downstream 78871 4591821 ~ 4592094 (+)
G1584797 NA non-coding downstream 191807 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 281440 4794390 ~ 4794793 (+)
G1584344 NA other upstream 445949 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 818191 3687991 ~ 3692012 (+)
G1583951 NA other upstream 866299 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 886387 3609578 ~ 3622792 (+)
LOC110497289 LOC106610394 other upstream 1023755 3483359 ~ 3492477 (+)
G1584899 NA other downstream 609041 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 917347 5428914 ~ 5491185 (+)
G1585375 NA other downstream 935526 5448476 ~ 5448938 (+)
G1585483 NA other downstream 1130806 5643756 ~ 5715375 (+)

Expression


Co-expression Network