LOC110514758 (LOC106595337)


Basic Information

Item Value
gene id LOC110514758
gene name LOC106595337
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4545961 ~ 4551255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955463.1
ATGGCTTGTTTCTGCTGGTGCAAAAAGCCTTGCTCTCCTGTTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATCCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCTTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGaccTCTGTCTCTGCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAACATGACTCTTCCCAGGACCAGCTCAGCCACCAGAAGTATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCGTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCAGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTCGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGACCACCTGGAGAGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAATCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCAATAGAGCAGGAGGCCCCAGCACACAGGGCCTAA
>TU1814367
GGACGCACACGAGTTACTCGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGC

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955463.1 False 1335 mRNA 0.56 11 4545961 4551255
TU1814367 True 299 TUCP 0.54 3 4548555 4549189

Neighbor

gene id symbol gene type direction distance location
LOC110512119 LOC106595337 coding upstream 33011 4509175 ~ 4512950 (+)
LOC110514540 LOC106610365 coding upstream 92057 4451130 ~ 4453904 (+)
LOC110515142 LOC106602209 coding upstream 94884 4448502 ~ 4451077 (+)
LOC118941534 LOC106595337 coding upstream 103955 4435807 ~ 4442006 (+)
LOC118941418 LOC106602209 coding upstream 122276 4418701 ~ 4423685 (+)
LOC118941536 LOC106610423 coding downstream 20489 4571744 ~ 4599810 (+)
LOC110534951 LOC106602209 coding downstream 54442 4605697 ~ 4610263 (+)
LOC110533205 LOC106595337 coding downstream 69886 4621141 ~ 4626449 (+)
LOC118941419 LOC106597769 coding downstream 75316 4626571 ~ 4628355 (+)
LOC118941538 NA coding downstream 89380 4640635 ~ 4643443 (+)
G1584731 NA non-coding upstream 58226 4486900 ~ 4487735 (+)
LOC118941417 LOC106595337 non-coding upstream 143729 4400660 ~ 4404928 (+)
G1584673 NA non-coding upstream 214580 4331083 ~ 4331381 (+)
G1584668 NA non-coding upstream 216549 4329195 ~ 4329412 (+)
G1584760 NA non-coding downstream 40566 4591821 ~ 4592094 (+)
G1584797 NA non-coding downstream 153502 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 243135 4794390 ~ 4794793 (+)
G1584869 NA non-coding downstream 369538 4920793 ~ 4921499 (+)
G1584344 NA other upstream 482735 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 854977 3687991 ~ 3692012 (+)
G1583951 NA other upstream 903085 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 923173 3609578 ~ 3622792 (+)
LOC110497289 LOC106610394 other upstream 1060541 3483359 ~ 3492477 (+)
G1584899 NA other downstream 570736 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 879042 5428914 ~ 5491185 (+)
G1585375 NA other downstream 897221 5448476 ~ 5448938 (+)
G1585483 NA other downstream 1092501 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1257723 5808978 ~ 5812853 (+)

Expression


Co-expression Network