LOC110533205 (LOC106595337)


Basic Information

Item Value
gene id LOC110533205
gene name LOC106595337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4621141 ~ 4626449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955468.1
CCACGGCAACCAGTGAAATGTATTTCTGAGTTAGGTTGGCTTGTTTTCACAATTCACAACAAAATGCCTCCAGCTGTCCATCACCACTGTAAATATAAagagtggttatagaggAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTgacccctcaccctctgatcaactctcctccctccatccacttcCCTCTCCTGTTAAATGTTCCTCTCAGCCTTGCTCTCCTGCTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGGGAAATCCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGCCAGGAGGGCACAACAGTCAGaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGACCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGAGGCCAAAGACAGCACCCTCTGCTGTTCAGTCCAGAGCAATTCAGACAAGTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955468.1 True 1521 mRNA 0.55 10 4621141 4626449

Neighbor

gene id symbol gene type direction distance location
LOC110534951 LOC106602209 coding upstream 10878 4605697 ~ 4610263 (+)
LOC118941536 LOC106610423 coding upstream 44603 4571744 ~ 4599810 (+)
LOC110514758 LOC106595337 coding upstream 69886 4545961 ~ 4551255 (+)
LOC110512119 LOC106595337 coding upstream 108191 4509175 ~ 4512950 (+)
LOC110514540 LOC106610365 coding upstream 167237 4451130 ~ 4453904 (+)
LOC118941419 LOC106597769 coding downstream 122 4626571 ~ 4628355 (+)
LOC118941538 NA coding downstream 14186 4640635 ~ 4643443 (+)
LOC118941420 LOC106597769 coding downstream 17595 4644044 ~ 4645765 (+)
LOC118941421 LOC106595337 coding downstream 37547 4663996 ~ 4668447 (+)
LOC118941539 LOC106595337 coding downstream 71333 4697782 ~ 4700374 (+)
G1584760 NA non-coding upstream 29047 4591821 ~ 4592094 (+)
G1584722 NA non-coding upstream 69014 4453998 ~ 4552127 (+)
G1584731 NA non-coding upstream 133406 4486900 ~ 4487735 (+)
LOC118941418 LOC106602209 non-coding upstream 201875 4418701 ~ 4423685 (+)
G1584797 NA non-coding downstream 78308 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 167941 4794390 ~ 4794793 (+)
G1584869 NA non-coding downstream 294344 4920793 ~ 4921499 (+)
LOC110498597 LOC106592710 non-coding downstream 455570 5069016 ~ 5084826 (+)
G1584906 LOC106610368 non-coding downstream 462360 5088809 ~ 5090649 (+)
G1584344 NA other upstream 557915 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 930157 3687991 ~ 3692012 (+)
G1583951 NA other upstream 978265 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 998353 3609578 ~ 3622792 (+)
G1584899 NA other downstream 495542 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 803848 5428914 ~ 5491185 (+)
G1585375 NA other downstream 822027 5448476 ~ 5448938 (+)
G1585483 NA other downstream 1017307 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1182529 5808978 ~ 5812853 (+)

Expression


Co-expression Network