LOC118941419 (LOC106597769)


Basic Information

Item Value
gene id LOC118941419
gene name LOC106597769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4626571 ~ 4628355 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953995.1
tgaaaccaGTGAAAAATAAGTTATGACAGGACACTGAGATAGTTATGAGGAGTACACGATGTAGTAGACCTGTAGTAGACTagtactgtagtagactgtagacaGTGTGGTGGACTGTAGAGGAAATGAGAATCCTATGATCACATGTGTTTTCTTACAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAATTGGTTCTGCTGTAATGACAGCCAGGTGTCAATGTCCAATGTAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCAaaacccccagcccagcctcaacAAAGGCAGCATCTGGACTAAGAAAATCCCATTTAAGATGATTCTGTTGACCGTTGTAACTCTTTAACTCAGGAAGATTTATGGTCTGGAATTCAGGCCGGTCCTAACAGGAAACGTGACAAAGGGAAGCAGCTGTAATGGAGCCTTCTAACACCCAATCAGGTCTGGAGGAGGAATGTCACAAAGATTCAGAGATGCTATGAGTATCTTTTGAAGTTACTCTCCAGTTGTATCCATTTGAATAAATACAGACATGAAAATGCTGGGCTACGGATGTGACCTTGGTTCTGTGAGTAGAGTAACAGGTCACCAAACAAGCTATGGGACAAGCTCAACCAAGCACAATAATGTCTCTGGATGCTTTCAAAAATTATGAATAATCAGACCT

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953995.1 True 880 mRNA 0.46 3 4626571 4628355

Neighbor

gene id symbol gene type direction distance location
LOC110533205 LOC106595337 coding upstream 122 4621141 ~ 4626449 (+)
LOC110534951 LOC106602209 coding upstream 16308 4605697 ~ 4610263 (+)
LOC118941536 LOC106610423 coding upstream 50033 4571744 ~ 4599810 (+)
LOC110514758 LOC106595337 coding upstream 75316 4545961 ~ 4551255 (+)
LOC110512119 LOC106595337 coding upstream 113621 4509175 ~ 4512950 (+)
LOC118941538 NA coding downstream 12280 4640635 ~ 4643443 (+)
LOC118941420 LOC106597769 coding downstream 15689 4644044 ~ 4645765 (+)
LOC118941421 LOC106595337 coding downstream 35641 4663996 ~ 4668447 (+)
LOC118941539 LOC106595337 coding downstream 69427 4697782 ~ 4700374 (+)
LOC118941423 LOC106595337 coding downstream 135256 4763611 ~ 4771296 (+)
G1584760 NA non-coding upstream 34477 4591821 ~ 4592094 (+)
G1584722 NA non-coding upstream 74444 4453998 ~ 4552127 (+)
G1584731 NA non-coding upstream 138836 4486900 ~ 4487735 (+)
LOC118941418 LOC106602209 non-coding upstream 207305 4418701 ~ 4423685 (+)
G1584797 NA non-coding downstream 76402 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 166035 4794390 ~ 4794793 (+)
G1584869 NA non-coding downstream 292438 4920793 ~ 4921499 (+)
LOC110498597 LOC106592710 non-coding downstream 453664 5069016 ~ 5084826 (+)
G1584906 LOC106610368 non-coding downstream 460454 5088809 ~ 5090649 (+)
G1584344 NA other upstream 563345 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 935587 3687991 ~ 3692012 (+)
G1583951 NA other upstream 983695 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 1003783 3609578 ~ 3622792 (+)
G1584899 NA other downstream 493636 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 801942 5428914 ~ 5491185 (+)
G1585375 NA other downstream 820121 5448476 ~ 5448938 (+)
G1585483 NA other downstream 1015401 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1180623 5808978 ~ 5812853 (+)

Expression


Co-expression Network