LOC118941421 (LOC106595337)


Basic Information

Item Value
gene id LOC118941421
gene name LOC106595337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4663996 ~ 4668447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953997.1
tacagtatttaaTAGAGAGACTGTGTAGAGTGATAATATCTCTGTGTTGGAGGCGTTAGAcctgtttctctccttcctccagatcTCTGTCTCTTCAGGAACACTCTAGTCCAACGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGACGCACACGAGTTACTCGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTGGTACCAGGCCCAGCCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCGAAAGGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCCACAACAGGGGCAGCACTGGGCCCAACATCAACACACCCA
>XM_036953998.1
tacagtatttaaTAGAGAGACTGTGTAGAGTGATAATATCTCTGTGTTGGAGGCGTTAGAcctgtttctctccttcctccagatcTCTGTCTCTTCAGGAACACTCTAGTCCAACGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGACGCACACGAGTTACTCGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGTAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGTACTGTTTACTCTCACCATCTATATTCTTGTGTTGCTATTTATGTGTACGGTTCCTTTCACCCTACAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTGGTACCAGGCCCAGCCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCGAAAGGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCCACAACAGGGGCAGCACTGGGCCCAACATCAACACACCCA
>XR_005037635.1
tacagtatttaaTAGAGAGACTGTGTAGAGTGATAATATCTCTGTGTTGGAGGCGTTAGAcctgtttctctccttcctccagatcTCTGTCTCTTCAGGAACACTCTAGTCCAACGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGACGCACACGAGTTACTCGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCTACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGTAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTGGTACCAGGCCCAGCCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCGAAAGGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCCACAACAGGGGCAGCACTGGGCCCAACATCAACACACCCA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953997.1 False 1459 mRNA 0.57 9 4663996 4668447
XM_036953998.1 False 1664 mRNA 0.56 9 4663996 4668447
XR_005037635.1 True 1595 mRNA 0.56 10 4663996 4668447

Neighbor

gene id symbol gene type direction distance location
LOC118941420 LOC106597769 coding upstream 18231 4644044 ~ 4645765 (+)
LOC118941538 NA coding upstream 20553 4640635 ~ 4643443 (+)
LOC118941419 LOC106597769 coding upstream 35641 4626571 ~ 4628355 (+)
LOC110533205 LOC106595337 coding upstream 37547 4621141 ~ 4626449 (+)
LOC110534951 LOC106602209 coding upstream 53733 4605697 ~ 4610263 (+)
LOC118941539 LOC106595337 coding downstream 29335 4697782 ~ 4700374 (+)
LOC118941423 LOC106595337 coding downstream 95164 4763611 ~ 4771296 (+)
LOC118941424 LOC106595337 coding downstream 114038 4782485 ~ 4794237 (+)
LOC118941353 LOC106602209 coding downstream 141934 4810381 ~ 4813313 (+)
LOC110533207 mxd4 coding downstream 294249 4962696 ~ 5004867 (+)
LOC118941536 LOC106610423 non-coding upstream 64186 4571744 ~ 4599810 (+)
G1584760 NA non-coding upstream 71902 4591821 ~ 4592094 (+)
G1584722 NA non-coding upstream 111869 4453998 ~ 4552127 (+)
G1584731 NA non-coding upstream 176261 4486900 ~ 4487735 (+)
LOC118941418 LOC106602209 non-coding upstream 244730 4418701 ~ 4423685 (+)
G1584797 NA non-coding downstream 36310 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 125943 4794390 ~ 4794793 (+)
G1584869 NA non-coding downstream 252346 4920793 ~ 4921499 (+)
LOC110498597 LOC106592710 non-coding downstream 413572 5069016 ~ 5084826 (+)
G1584906 LOC106610368 non-coding downstream 420362 5088809 ~ 5090649 (+)
LOC110514758 LOC106595337 other upstream 114807 4545961 ~ 4551255 (+)
G1584344 NA other upstream 600770 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 973012 3687991 ~ 3692012 (+)
G1583951 NA other upstream 1021120 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 1041208 3609578 ~ 3622792 (+)
G1584899 NA other downstream 453544 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 761850 5428914 ~ 5491185 (+)
G1585375 NA other downstream 780029 5448476 ~ 5448938 (+)
G1585483 NA other downstream 975309 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1140531 5808978 ~ 5812853 (+)

Expression


Co-expression Network