LOC118941539 (LOC106595337)


Basic Information

Item Value
gene id LOC118941539
gene name LOC106595337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4697782 ~ 4700374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955470.1
GAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGCTGAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTTAAATTCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGacTTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCTTTCGGGTTTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCACATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAAGTGGAGCAGTTCCACACACTGCCTCTGTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955470.1 True 1099 mRNA 0.55 7 4697782 4700374

Neighbor

gene id symbol gene type direction distance location
LOC118941421 LOC106595337 coding upstream 29335 4663996 ~ 4668447 (+)
LOC118941420 LOC106597769 coding upstream 52017 4644044 ~ 4645765 (+)
LOC118941538 NA coding upstream 54339 4640635 ~ 4643443 (+)
LOC118941419 LOC106597769 coding upstream 69427 4626571 ~ 4628355 (+)
LOC110533205 LOC106595337 coding upstream 71333 4621141 ~ 4626449 (+)
LOC118941423 LOC106595337 coding downstream 63237 4763611 ~ 4771296 (+)
LOC118941424 LOC106595337 coding downstream 82111 4782485 ~ 4794237 (+)
LOC118941353 LOC106602209 coding downstream 110007 4810381 ~ 4813313 (+)
LOC110533207 mxd4 coding downstream 262322 4962696 ~ 5004867 (+)
LOC110497180 LOC106610322 coding downstream 324566 5024940 ~ 5027850 (+)
LOC118941536 LOC106610423 non-coding upstream 97972 4571744 ~ 4599810 (+)
G1584760 NA non-coding upstream 105688 4591821 ~ 4592094 (+)
G1584722 NA non-coding upstream 145655 4453998 ~ 4552127 (+)
G1584731 NA non-coding upstream 210047 4486900 ~ 4487735 (+)
LOC118941418 LOC106602209 non-coding upstream 278516 4418701 ~ 4423685 (+)
G1584797 NA non-coding downstream 4383 4704757 ~ 4796239 (+)
G1584826 NA non-coding downstream 94016 4794390 ~ 4794793 (+)
G1584869 NA non-coding downstream 220419 4920793 ~ 4921499 (+)
LOC110498597 LOC106592710 non-coding downstream 381645 5069016 ~ 5084826 (+)
G1584906 LOC106610368 non-coding downstream 388435 5088809 ~ 5090649 (+)
LOC110514758 LOC106595337 other upstream 148593 4545961 ~ 4551255 (+)
G1584344 NA other upstream 634556 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 1006798 3687991 ~ 3692012 (+)
G1583951 NA other upstream 1054906 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 1074994 3609578 ~ 3622792 (+)
G1584899 NA other downstream 421617 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 729923 5428914 ~ 5491185 (+)
G1585375 NA other downstream 748102 5448476 ~ 5448938 (+)
G1585483 NA other downstream 943382 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1108604 5808978 ~ 5812853 (+)

Expression


Co-expression Network