Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100301741 |
| gene name | mtap |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5109541 ~ 5115195 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mtap | Predicted to enable S-methyl-5-thioadenosine phosphorylase activity. Predicted to be involved in L-methionine salvage from methylthioadenosine. Predicted to act upstream of or within purine ribonucleoside salvage. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in biliary tract benign neoplasm and diaphyseal medullary stenosis with malignant fibrous histiocytoma. Orthologous to human MTAP (methylthioadenosine phosphorylase). |
| description |
|---|
| S-methyl-5'-thioadenosine phosphorylase |
| id | name | namespace |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | biological_process |
| GO:0017061 | S-methyl-5-thioadenosine phosphorylase activity | molecular_function |
| GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001160570.1 | True | 1000 | mRNA | 0.46 | 5 | 5109541 | 5115195 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497175 | LOC106610327 | coding | upstream | 13882 | 5093588 ~ 5095659 (+) |
| LOC110498597 | LOC106592710 | coding | upstream | 24715 | 5069016 ~ 5084826 (+) |
| LOC110498596 | LOC106610325 | coding | upstream | 43046 | 5040418 ~ 5066495 (+) |
| LOC118941425 | NA | coding | upstream | 51525 | 5056767 ~ 5058016 (+) |
| LOC118936569 | LOC106610310 | coding | upstream | 72647 | 5035125 ~ 5036894 (+) |
| tet2 | LOC106602283 | coding | downstream | 218185 | 5333380 ~ 5390400 (+) |
| trnaa-ugc-141 | NA | coding | downstream | 279429 | 5394624 ~ 5394699 (+) |
| LOC118941427 | arhgef38 | coding | downstream | 290271 | 5405466 ~ 5424393 (+) |
| LOC110497310 | gstcd | coding | downstream | 313719 | 5428914 ~ 5491185 (+) |
| npnta | npnt | coding | downstream | 383962 | 5499157 ~ 5560224 (+) |
| G1584907 | NA | non-coding | upstream | 7158 | 5099116 ~ 5102383 (+) |
| G1584906 | LOC106610368 | non-coding | upstream | 18892 | 5088809 ~ 5090649 (+) |
| G1584869 | NA | non-coding | upstream | 188042 | 4920793 ~ 4921499 (+) |
| G1584797 | NA | non-coding | upstream | 313302 | 4704757 ~ 4796239 (+) |
| G1584900 | cdn2b | non-coding | downstream | 14835 | 5130030 ~ 5132249 (+) |
| G1584932 | NA | non-coding | downstream | 36326 | 5151521 ~ 5151833 (+) |
| G1584934 | NA | non-coding | downstream | 41987 | 5157182 ~ 5158472 (+) |
| G1584935 | NA | non-coding | downstream | 43392 | 5158587 ~ 5159609 (+) |
| G1584936 | NA | non-coding | downstream | 45408 | 5160603 ~ 5160972 (+) |
| LOC110514758 | LOC106595337 | other | upstream | 560352 | 4545961 ~ 4551255 (+) |
| G1584344 | NA | other | upstream | 1046315 | 4062668 ~ 4063226 (+) |
| LOC118941415 | LOC106602193 | other | upstream | 1418557 | 3687991 ~ 3692012 (+) |
| G1583951 | NA | other | upstream | 1466665 | 3640649 ~ 3642876 (+) |
| LOC110497294 | LOC106602191 | other | upstream | 1486753 | 3609578 ~ 3622792 (+) |
| G1584899 | NA | other | downstream | 6796 | 5121991 ~ 5128284 (+) |
| G1585375 | NA | other | downstream | 333281 | 5448476 ~ 5448938 (+) |
| G1585483 | NA | other | downstream | 528561 | 5643756 ~ 5715375 (+) |
| G1585804 | NA | other | downstream | 693783 | 5808978 ~ 5812853 (+) |
