LOC110497334 (LOC106610305)


Basic Information

Item Value
gene id LOC110497334
gene name LOC106610305
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6122953 ~ 6151945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954081.1
GGCGCGCTCTGCTTGTCACCACTGACTGCTGCACACGGAGGAAACGGTACGCTGCTCTCTCTCGGGCTGTGCTCAGACCCTATCTCTTATCTCACCCGCCCTCAGTCTGTTTGCACGCAAAACAGTCCGTTGTTGACTGGAATACGATACGAAGATCCTGCTTCTAGGCAGGTTTTTCTACAAGTGTTCTACTGCTCAGTATGCCAGAACGCATGGACTAATTTAACGACGATGGCTTCGTTGCGAATGGTCGCCAAACTCCGGGCTGGAGTTGTCGGATGTACTAAACCGTTCCGCTACGCACTCAAAACAACCCGATCTCCGGTGAAATTACTGCATACGGACCATCCCAGACAGCCACAGTGGAGATGTCCTCCCCAAGTGGTCTTCTGCAGTACTGTAGCACCCTCTAGTGATGTGGTGTTGCAGTATAAACATGGACGACCGGTGCTGGCTGTGCCGCTACCCTCCAGGCAGGAGAGCTGTCTGTTCTTCCTCAGGCCCATGTTAATGACTGTAGGAGACCTGATCCACGACCTGCAGAGAGAAGACCCAGGAGTCACCTCTGCCTCTGTGCTCACCAAGGATGGTGCACGGGTAGCTAACAGCACCTCTATAGACAGTCTCCTGGACAAAGACTTCCAGCTCCTCATCAATGATGCTGTATACAACATCCACTCCCCTGAAAGAGGTGAAGCAACTCTTTCCCAAAACATAGAGGCGTCCAGTGTGTCCAGTGAGCATGTGGTGGACGTGGAGGACATGAAGCACATGGTGCAGCTGCTCCACACGGCCCtccacctgcctgaccaccaCCTGCTGAAGGAGAGGCAGCTGCTGGAGAGACTGGATGGACTCAAACAGGACCTCTCACCTCTGGAACAGGTGAAGGCACAGCTGGCGCGCAGTGCAGAGTTCCACTCCTCCAGGACTCTGTGGACAGGTGTGGCCCTGCTGTCTGTGCAGGGCGGGGCCTTGGCCTGGCTCACCTGGTGGGTGTACTCCTGGGATGTCATGGAGCCCGTCACCTACTTCCTCACCTACTGCACCAGCATCGGAGTCTTCTCCTACTATGTCCTCACCAagcagGATTATGTGTATCCAGATGCCAAAGACAGGCAGTTCCTGTATTACTTCCACAAGGGTGCCAAGAAGGAGCGCTTCAACGTGCAGAAGTACaatgagctgagagaggagtTGGCTTCGGTGGAAGAAGATTTGAGACGTCTAAGGAATCCAACCCAACTTCAGCTCCCTGTAGAACAGATCCAGAGCCAGCCATGAAGagcagcaccacacacacacacaccgtcaaaCTGAAGGACTACTGAGCAGCAGCATTTCTTCCCATTTATTTTGATAACAATGCATTTTTCTTACTAACCCTGCAGATCATTTTAGAGTTTTGGTTTACACCGGTTACAATGTTGTAAGTCATTTGTGGTAATAGAAGTATAGTAATAAATATCATATGAGAAAGCATCTTCCTGAATACTAACCATATTTTCTCTGCATTCCTGGCCATTGCCGTAATTCAATATAGTAGCTAGTGTCATTTCTATAGAAGAGCAAAGTTATGAATAGTGATGTGTATATAATGAGATGATCCATTCTGAACGTTTACAAAGATTAAGAGGAACTGAGACTGAACACAAATTacatttcaatattttatttcaACAGTTTTACAACTGTCATTTTATAAATGAGAGATTCTAACTCAATAGGAGCCCCACGCACCTCTCCAAATGCTATTAGTGCAAACCCAATCTCCCAAAAGGTCAGAGATACATTTCCCTGGTGGACCACAAAACAAGAAAAGTACATTACTCTTACTAAGCAGTGGTTCCTTATATTCACCCATGGAGACTAAAATGGTCCTCATTTTCTTGAACAATTCAGAAATAGAAACATGAATTGGTGTCCAGCACTCAGGTTCACATACAAATGAGTAATACCTCATGCATTGTCATTGCTTTAGTAAATATCTCCCAGGTGACTAACAATTATTTATTTGTTAAACATAAGATGGTCGGTTGATTGGTACCCTGAGTTGTCTTATCTGAGTTACATAATGCACACGTGCGCATATTTTCTGGCTGAAGAATATGCCTGTAGTCATGTGGTGTATAAAAATGGTATTTAAAAAGATTGGTACTGTTAAAGTTGTTCAGTATTGGAGCgacaggtagccaagtggttagagatGCGAGCCAGCAACCAGAGGGTTTCCAATCCCAGCCCAGATGGGAtgtgggggggggtgtaattGACCAATAAAGTATCTTAAGTTGAAAACAGTTGTCAAATACCCTCAATAACAAAGAACAATGGTAAAAAGCTGTTATTTTTTATAGTTAATTAAAAGGCCATTGATTTGAATGACCAAACAAAGGCACCATAGTGGCAGTAAACAATGTATAGGACTGATTTTCCTGAGTCAGAGTAGTACCTTAGGTCATGTGACCAAACCTGCAGTGTTTACTTAACGTCTTTTAGACACTTGACTCCCTGAGGTACTTTCCACATTGGAATTTGTTCACGTTTAGCCTGCCACTTTCAAAACATGTAAAACTACATTTGAGTTGTAAAGGCTAAGCACATCCAAGTACAAACAGAAACAACACAAATTCCCTTTTGACAGAACAAGTGGGGAGACAACATATTGAGGCACATCATTGTCTGTCTTTTCATCTTGTCTACTACAGAGGACCAAATGGGGCAGTGGGTACAGTGGGTCCCTGGCGTAATAGGTTGGAGGTTGTGGGTTTAATCCATATATATTGTGCTTGATTGACAGTTTCTGTAACTGTCGATGTCTAACATACAAAGAGAAGCACTTCAAGTGTGAAGGATTTGGGGTTAAATCTCAGCCCTGCAACCAAGCTGTTGTGGGTTCAAATCTCTACTCTTGTGATTTAGTGTACGTTGTCGATGTCAACCATATGAATATATGTGTTTTGAAGTGTGAAGCTATCGGTGGCACAGATTTAAGGCTTGTTCCTGTGAGATTATGGGTTTGATCCCAGTCACTGAAGTGTGGTTCTATTGACACTGTAGTGGTTGGAGGACTGATGAGGGTTAATACCTGGGGTTCACATCCCTGTAACCAGCAGTGGTTATGCGAGAAGATGCCTGTATCTCAAGAGAGATACtaagtgtttatttttttaaggGATTTCCCCATGAATACACTTCAGGAACTAACACTTATCTTGGTCATTTTGACATTTGCGCAAATGTGTAGTAGACTAAAGCACAAGAGGCAGGGATTTAACCCCAGAGCCACTTCTTCCTTTAAACGATGTgcacatttctttgtatatttgACACAGATAGTTGATGTAAACAAATCAAGCCCAGGGACCCACTACTCAATGCTAAGAATTAGCAGTATTCTCTCGAGAAAGGCCTTAAGGGACTGGTGATGCAAAATCCTTTACTGACTAAGAATCCCCTCTTAACAAATAGCTATCCACAAACAGACTGAGAATAAAGTCATTTGAAATGTTAATGCTCAAATTACCATTCTCATGTCACTCTTTTACCTGCCCTGCAGGTACATCCCATGACCTCTGTCAACACCAACAGGGAAAGCCTGAAGCCGAGCAGCCAAGCAGGTTTCACCAGTATAGTACATGCTTTGTTTTAGGTCAGTTTTGCCACCACAGAATGTGTGTTAAAATAACACTGCATACACAATCATCAGCCAATGACATGATCTCCATTTGGTTTCATAGGAAAGAAGATTAGAATAAAGGGAATATGCACAGTTT
>XM_036954082.1
GCGCGCTCTGCTTGTCACCACTGACTGCTGCACACGGAGGAAACGGTACGCTGCTCTCTCTCGGGCTGTGCTCAGACCCTATCTCTTATCTCACCCGCCCTCAGTCTGTTTGCACGCAAAACAGTCCGTTGTTGACTGGAATACGATACGAAGATCCTGCTTCTAGGCAGGTTTTTCTACAAGTGTTCTACTGCTCAGTATGCCAGAACGCATGGACTAATTTAACGACGATGGCTTCGTTGCGAATGGTCGCCAAACTCCGGGCTGGAGTTGTCGGATGTACTAAACCGTTCCGCTACGCACTCAAAACAACCCGATCTCCGGTGAAATTACTGCATACGGACCATCCCAGACAGCCACAGTGGAGATGTCCTCCCCAAGTGGTCTTCTGCAGTACTGTAGCACCCTCTAGTGATGTGGTGTTGCAGTATAAACATGGACGACCGGTGCTGGCTGTGCCGCTACCCTCCAGGCAGGAGAGCTGTCTGTTCTTCCTCAGGCCCATGTTAATGACTGTAGGAGACCTGATCCACGACCTGCAGAGAGAAGACCCAGGAGTCACCTCTGCCTCTGTGCTCACCAAGGATGGTGCACGGGTAGCTAACAGCACCTCTATAGACAGTCTCCTGGACAAAGACTTCCAGCTCCTCATCAATGATGCTGTATACAACATCCACTCCCCTGAAAGAGAGGCGTCCAGTGTGTCCAGTGAGCATGTGGTGGACGTGGAGGACATGAAGCACATGGTGCAGCTGCTCCACACGGCCCtccacctgcctgaccaccaCCTGCTGAAGGAGAGGCAGCTGCTGGAGAGACTGGATGGACTCAAACAGGACCTCTCACCTCTGGAACAGGTGAAGGCACAGCTGGCGCGCAGTGCAGAGTTCCACTCCTCCAGGACTCTGTGGACAGGTGTGGCCCTGCTGTCTGTGCAGGGCGGGGCCTTGGCCTGGCTCACCTGGTGGGTGTACTCCTGGGATGTCATGGAGCCCGTCACCTACTTCCTCACCTACTGCACCAGCATCGGAGTCTTCTCCTACTATGTCCTCACCAagcagGATTATGTGTATCCAGATGCCAAAGACAGGCAGTTCCTGTATTACTTCCACAAGGGTGCCAAGAAGGAGCGCTTCAACGTGCAGAAGTACaatgagctgagagaggagtTGGCTTCGGTGGAAGAAGATTTGAGACGTCTAAGGAATCCAACCCAACTTCAGCTCCCTGTAGAACAGATCCAGAGCCAGCCATGAAGagcagcaccacacacacacacaccgtcaaaCTGAAGGACTACTGAGCAGCAGCATTTCTTCCCATTTATTTTGATAACAATGCATTTTTCTTACTAACCCTGCAGATCATTTTAGAGTTTTGGTTTACACCGGTTACAATGTTGTAAGTCATTTGTGGTAATAGAAGTATAGTAATAAATATCATATGAGAAAGCATCTTCCTGAATACTAACCATATTTTCTCTGCATTCCTGGCCATTGCCGTAATTCAATATAGTAGCTAGTGTCATTTCTATAGAAGAGCAAAGTTATGAATAGTGATGTGTATATAATGAGATGATCCATTCTGAACGTTTACAAAGATTAAGAGGAACTGAGACTGAACACAAATTacatttcaatattttatttcaACAGTTTTACAACTGTCATTTTATAAATGAGAGATTCTAACTCAATAGGAGCCCCACGCACCTCTCCAAATGCTATTAGTGCAAACCCAATCTCCCAAAAGGTCAGAGATACATTTCCCTGGTGGACCACAAAACAAGAAAAGTACATTACTCTTACTAAGCAGTGGTTCCTTATATTCACCCATGGAGACTAAAATGGTCCTCATTTTCTTGAACAATTCAGAAATAGAAACATGAATTGGTGTCCAGCACTCAGGTTCACATACAAATGAGTAATACCTCATGCATTGTCATTGCTTTAGTAAATATCTCCCAGGTGACTAACAATTATTTATTTGTTAAACATAAGATGGTCGGTTGATTGGTACCCTGAGTTGTCTTATCTGAGTTACATAATGCACACGTGCGCATATTTTCTGGCTGAAGAATATGCCTGTAGTCATGTGGTGTATAAAAATGGTATTTAAAAAGATTGGTACTGTTAAAGTTGTTCAGTATTGGAGCgacaggtagccaagtggttagagatGCGAGCCAGCAACCAGAGGGTTTCCAATCCCAGCCCAGATGGGAtgtgggggggggtgtaattGACCAATAAAGTATCTTAAGTTGAAAACAGTTGTCAAATACCCTCAATAACAAAGAACAATGGTAAAAAGCTGTTATTTTTTATAGTTAATTAAAAGGCCATTGATTTGAATGACCAAACAAAGGCACCATAGTGGCAGTAAACAATGTATAGGACTGATTTTCCTGAGTCAGAGTAGTACCTTAGGTCATGTGACCAAACCTGCAGTGTTTACTTAACGTCTTTTAGACACTTGACTCCCTGAGGTACTTTCCACATTGGAATTTGTTCACGTTTAGCCTGCCACTTTCAAAACATGTAAAACTACATTTGAGTTGTAAAGGCTAAGCACATCCAAGTACAAACAGAAACAACACAAATTCCCTTTTGACAGAACAAGTGGGGAGACAACATATTGAGGCACATCATTGTCTGTCTTTTCATCTTGTCTACTACAGAGGACCAAATGGGGCAGTGGGTACAGTGGGTCCCTGGCGTAATAGGTTGGAGGTTGTGGGTTTAATCCATATATATTGTGCTTGATTGACAGTTTCTGTAACTGTCGATGTCTAACATACAAAGAGAAGCACTTCAAGTGTGAAGGATTTGGGGTTAAATCTCAGCCCTGCAACCAAGCTGTTGTGGGTTCAAATCTCTACTCTTGTGATTTAGTGTACGTTGTCGATGTCAACCATATGAATATATGTGTTTTGAAGTGTGAAGCTATCGGTGGCACAGATTTAAGGCTTGTTCCTGTGAGATTATGGGTTTGATCCCAGTCACTGAAGTGTGGTTCTATTGACACTGTAGTGGTTGGAGGACTGATGAGGGTTAATACCTGGGGTTCACATCCCTGTAACCAGCAGTGGTTATGCGAGAAGATGCCTGTATCTCAAGAGAGATACtaagtgtttatttttttaaggGATTTCCCCATGAATACACTTCAGGAACTAACACTTATCTTGGTCATTTTGACATTTGCGCAAATGTGTAGTAGACTAAAGCACAAGAGGCAGGGATTTAACCCCAGAGCCACTTCTTCCTTTAAACGATGTgcacatttctttgtatatttgACACAGATAGTTGATGTAAACAAATCAAGCCCAGGGACCCACTACTCAATGCTAAGAATTAGCAGTATTCTCTCGAGAAAGGCCTTAAGGGACTGGTGATGCAAAATCCTTTACTGACTAAGAATCCCCTCTTAACAAATAGCTATCCACAAACAGACTGAGAATAAAGTCATTTGAAATGTTAATGCTCAAATTACCATTCTCATGTCACTCTTTTACCTGCCCTGCAGGTACATCCCATGACCTCTGTCAACACCAACAGGGAAAGCCTGAAGCCGAGCAGCCAAGCAGGTTTCACCAGTATAGTACATGCTTTGTTTTAGGTCAGTTTTGCCACCACAGAATGTGTGTTAAAATAACACTGCATACACAATCATCAGCCAATGACATGATCTCCATTTGGTTTCATAGGAAAGAAGATTAGAATAAAGGGAATATGCACAGTTT

Function

NR:

description
calcium uniporter protein, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954081.1 False 3776 mRNA 0.44 8 6122953 6151945
XM_036954082.1 True 3748 mRNA 0.44 8 6122954 6151945

Neighbor

gene id symbol gene type direction distance location
LOC110497328 hadh coding upstream 147189 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 149474 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 156874 5943625 ~ 5966079 (+)
aimp1a aimp1 coding upstream 315726 5783970 ~ 5807227 (+)
npnta npnt coding upstream 562729 5499157 ~ 5560224 (+)
LOC110497332 LOC106610302 coding downstream 54348 6206293 ~ 6222302 (+)
LOC118941431 NA coding downstream 134236 6286181 ~ 6288416 (+)
LOC118941432 NA coding downstream 140124 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1408465 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 1423537 7575482 ~ 7766837 (+)
G1585964 NA non-coding upstream 531 6122212 ~ 6122422 (+)
G1585947 NA non-coding upstream 39796 6082900 ~ 6083157 (+)
G1585940 NA non-coding upstream 76960 6045714 ~ 6045993 (+)
G1585939 NA non-coding upstream 79665 6043034 ~ 6043288 (+)
G1585923 lef1 non-coding upstream 127306 5994413 ~ 5995647 (+)
G1585975 NA non-coding downstream 4492 6156437 ~ 6156637 (+)
G1585978 NA non-coding downstream 8376 6160321 ~ 6160543 (+)
G1585979 NA non-coding downstream 9051 6160996 ~ 6161223 (+)
G1585976 NA non-coding downstream 12568 6164513 ~ 6166667 (+)
G1585982 LOC106610304 non-coding downstream 16562 6168507 ~ 6169088 (+)
G1585804 NA other upstream 310100 5808978 ~ 5812853 (+)
G1585483 NA other upstream 407578 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 631806 5428914 ~ 5491185 (+)
G1585375 NA other upstream 674015 5448476 ~ 5448938 (+)
G1584899 NA other upstream 994669 5121991 ~ 5128284 (+)
G1585983 NA other downstream 18139 6169580 ~ 6170827 (+)
G1586200 NA other downstream 209903 6361848 ~ 6362312 (+)
G1586672 NA other downstream 902900 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2587599 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2749041 8900986 ~ 8947363 (+)

Expression


Co-expression Network