LOC118941431


Basic Information

Item Value
gene id LOC118941431
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6286181 ~ 6288416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037642.1
TGCTAATGCTGGTGATGCACAGGCACAGTGCAGCAGTTATCAGAAACAGCTCCCTGGCAAGTAATGTCGAattccagcctcctctggtggaGTTAAGaCCTGCCATGGTGAACTGACAGTAAGAGAGGAGCTGAAAGAAACCAGCCAGCACTACTCTGCCCTGGGTGAGAGGTTTGATTTGGGCCGGGGGAATTGGTGGCCCAGCAGGTCTGCCTggtctgcttgcctgcctgcgtATCCATCGATGGAAGTGTCTCTCACCTCAGGCCAGCTAGCGgttcctcctgcctcctcctttTCGACCTACCGACCGTCAGTCCGCTGAATGGTAATTCCCCCTGATAACCTTGTGGGAGCTGGGAAggcagagaagggggagaggggaggaagagcgAGAAAGGCTCCCGCTCCGTTGGTCTGAGCTTGGTGAGGTGATCGGTGTGTGGACAGGAGCCAGGCCAATCTAGCCATCAAGTGGGCCGTCAGCCGCCCAGCCAACGGGAGACACACTGCTAATGCACGGCATCGGTCACCAAGCTGCTGAAACAGCCATGGGTTGTAATTATATCTCAGAGCAGTGGCCAGGGCAGGGGGCACAGAGGGCAGGGAGCGAAGAGTGGAGAGGCCTCTGGACAGGGGTATTGGACTGGAAGGAGAGTCAGTGATTTTGCCTCTTTGCTGCCATTTTGGTCAACACAATCGCAAGAGCCTAAAAAATGAAATGCCCCATCAATATCTCAGTCTGTTTTTTAAaactaaataaaggtaaaataatacaaaacacgAGATCAGTTTTCCAGGTTTAAacagtgtatattttttttacactatTTATGTAGGTTAATATTTCAAATATGAAAAGACAGGCATTTGTCAGTGAGTAAAAAGAACAATGCAAAGAACATCTGGAGACGTTGAAACAAACAGCATGTCTGGAGTCCAGCCACTGAATTAGCCTTCTCTCTAATATTACTAGAAACAAATCTGGTGAGTTGGTTGTTGATTCATGAATATGGAATGGCAATCATTACATTTCATGGTCATTACAAAAGTATGTCAGAAGACGAAGTCCTACAAATAAACAAACTTTGGGCATTTTGTTTTGAGGATTGTAACTCCTTCCCAGGGCTCTAGGTTCATGCCCACCAGCCGCACACAACATTATTGTTGAAGAGGGAAACATTTAAGAGCCATTGTTTTCTTTGTGTTGGAGTTTTTGATGCCTGGCTGGTGAGGAATGTGTTCTGAAAGTAGCTTTCCCCCCTTCTGCTACACATCTCTAGTCATCAACTTTAACTGTCAATTCACTATAATAGGAAATTAAAAGAGCTTTGTAATGTACGAGGTTGTTGTTTGAATTATTAATGTCTTACATTGAAAAAGTCTTCATAGAAATGTGTTAGAAACTATATATTTGTAAAATAACTGTAAAATGTATACCGTAATATAAAGTAAAGCATTTTAAAACCTCCAAAATAAAATTGAATCACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037642.1 True 1492 mRNA 0.44 2 6286181 6288416

Neighbor

gene id symbol gene type direction distance location
LOC110497332 LOC106610302 coding upstream 63879 6206293 ~ 6222302 (+)
LOC110497334 LOC106610305 coding upstream 134236 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 310417 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 312702 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 320102 5943625 ~ 5966079 (+)
LOC118941432 NA coding downstream 3653 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1271994 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 1287066 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 1749378 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 1769882 8058298 ~ 8065704 (+)
G1586019 NA non-coding upstream 34819 6251127 ~ 6251362 (+)
G1586011 NA non-coding upstream 67351 6218507 ~ 6218830 (+)
G1585997 NA non-coding upstream 87221 6198586 ~ 6198960 (+)
G1585995 NA non-coding upstream 91719 6194115 ~ 6194462 (+)
G1586181 NA non-coding downstream 27819 6316235 ~ 6316553 (+)
G1586192 NA non-coding downstream 48456 6336872 ~ 6337187 (+)
G1586221 NA non-coding downstream 163396 6451812 ~ 6452628 (+)
G1586255 NA non-coding downstream 276145 6564561 ~ 6564984 (+)
G1586372 NA non-coding downstream 321910 6610326 ~ 6610757 (+)
G1585983 NA other upstream 115354 6169580 ~ 6170827 (+)
G1585804 NA other upstream 473328 5808978 ~ 5812853 (+)
G1585483 NA other upstream 570806 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 795034 5428914 ~ 5491185 (+)
G1586200 NA other downstream 73432 6361848 ~ 6362312 (+)
G1586672 NA other downstream 766429 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2451128 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2612570 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 2705038 8993454 ~ 9063965 (+)

Expression


Co-expression Network