LOC118941432


Basic Information

Item Value
gene id LOC118941432
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6292069 ~ 6294461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037643.1
ATATGTTCGGTACAGTCAGACCCGGGGAGGACGCTAGATTCTACAAGCCCTTTGATCCTGTCTCCATGGTGCCCCCAGATGTTCTGCTTGTCGGGGGATTGTGATGTGGAAGCCTGTTTATTTACAGAGGTGGCAGTATGATACCTGAATCTGGTCAGTATTGCAGCTCAACTCCATGAGTCCTACAGTCTTAGAAGAAGCAGTCTCTTTGATTTGGTGATTGCCAGGTCAAAGAGCGCGTCGAGCTGTCACGCCCCAGCGCCACCAGGGAGGGGCTCTCCTCGCCCACCTGGCCTAGCTCGCCTAGCTGGCCGTTACCCACAAGGCACCTGGACAGGAGAGGGACCCGCAGGCAGGAGGGCCAGAGGGGGAAGAGTGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037643.1 True 382 mRNA 0.57 3 6292069 6294461

Neighbor

gene id symbol gene type direction distance location
LOC118941431 NA coding upstream 3653 6286181 ~ 6288416 (+)
LOC110497332 LOC106610302 coding upstream 69767 6206293 ~ 6222302 (+)
LOC110497334 LOC106610305 coding upstream 140124 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 316305 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 318590 5966198 ~ 5973479 (+)
sclt1 sclt1 coding downstream 1265949 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 1281021 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 1743333 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 1763837 8058298 ~ 8065704 (+)
LOC110534593 LOC106610539 coding downstream 1777158 8071619 ~ 8136635 (+)
G1586019 NA non-coding upstream 40707 6251127 ~ 6251362 (+)
G1586011 NA non-coding upstream 73239 6218507 ~ 6218830 (+)
G1585997 NA non-coding upstream 93109 6198586 ~ 6198960 (+)
G1585995 NA non-coding upstream 97607 6194115 ~ 6194462 (+)
G1586181 NA non-coding downstream 21774 6316235 ~ 6316553 (+)
G1586192 NA non-coding downstream 42411 6336872 ~ 6337187 (+)
G1586221 NA non-coding downstream 157351 6451812 ~ 6452628 (+)
G1586255 NA non-coding downstream 270100 6564561 ~ 6564984 (+)
G1586372 NA non-coding downstream 315865 6610326 ~ 6610757 (+)
G1585983 NA other upstream 121242 6169580 ~ 6170827 (+)
G1585804 NA other upstream 479216 5808978 ~ 5812853 (+)
G1585483 NA other upstream 576694 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 800922 5428914 ~ 5491185 (+)
G1586200 NA other downstream 67387 6361848 ~ 6362312 (+)
G1586672 NA other downstream 760384 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2445083 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2606525 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 2698993 8993454 ~ 9063965 (+)

Expression


Co-expression Network