LOC110497209 (timm10)


Basic Information

Item Value
gene id LOC110497209
gene name timm10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8518920 ~ 8521118 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573208.2
AGCGGAAGTGGTTATTGAGAGGGAAGGAACAACACACGTGTATTCCTCAATCTGAAGGTTAAATAAGCCGGTGGTCGGGTGTGTTTGTTGGCCGCTGAGAGTGGTCGTTTGGACGGTTCGATTTTGGAGAGAGTACGGTCTGGAGCGGACACAACGCAGACATGGACCCAGAGAAAGCACAGCAACTGGCGGCGGAACTAGAAGTGGAAATGATGGCTGATATGTACAATCGGATGACCAACGCGTGCCACAGGAAGTGCGTGCCCCCCCACTACAAGGAGGCAGAGCTGTCTAAAGGGGAGGCGGTCTGTCTGGACCGCTGTGTGGCCAAGTACCTGGATCTACACGAGAGGCTGGGCCGCAAGCTCACCGAGCTCTCCGTTCAGGACGAGGAGATGATGAGGAAGAACGCTATtggacaataatatatatatatatttttagggaAGGATGGGGGtgggttagtgctagggttacCATGCTTTCTGTgcggagggatagagagagggagcgatagGGTAGGATGGAGCGATGGGGTGGGTTTAATAAACGTATGGCTCTTATGGAGGGGATGGAGTTGCCGTCCAGAGTGGGTTGGGTGTGTTTAAAGAGCAAGATGCTTGAAAGGAAGGTTTGTGATTACGGTGTGGAGCGGAAATTGGGATGGATGAAGCCTGTTTTGTGTGAACAGTGGTTGTACTTGTGGTTTGAGCCaagatcttttttttttaccacagcAAAGACACTAATGTGCATAGTTAACTGTTTTCTGTTCAGCCAATCAGTGCTCTCTCAGCATTGTGTGTGTAGCCCTTTTTAGTTATGTGGGCGTGTCAGAAGTGATGATGAATTGAGAAATCCCCCAATAATGTTTAACAAAATGCTTTCATTGTTCCATAGTGCAGTATTCTTCAAGCCAAACCATTAGGAGATGCTCCTTTCTGCTCTAGCCCTGGACTAATACACCTGTCTCAAATGATGAAGGACACCCGTTGGGCTCATATCAGTGTCtcggagtaggagtgctgatctaggctTTATGAGTACGGGCCCTTGTCCCGTAGGAATAGATGGAGACACTGCTGTAGTCAAAACGAGGACCATGCCTATCTGACTGTCATTTCTTTACATTTTGATCAGTCTCAGTTTGTTCATTTGGCTTTGTATTTTCTTCATGTTGAAACTGTGCTAATGTTGTACAAAGTTTTCTTTTGTGACAttttaaaaacctttttttgtttTAAATCTGAATAAATATTGTTATAGtatatattttagtttttagTTATACATTCTACACTGTATTTTCTTCACAGTAATACAATAACACTGTACTTATAattatgttccaaatggcaccctttttcctatgtagtgcactatttttgaccagagcacacTGGTccttggtcagaagtagtgcactatatagggaatagggtaccgtttGGGATGTATTAGCCTTATTCAATGTTAAA

Function

symbol description
timm10 Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in membrane and mitochondrion. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Predicted to be active in mitochondrial inner membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; optic tectum; and pectoral fin bud. Orthologous to human TIMM10 (translocase of inner mitochondrial membrane 10).

NR:

description
PREDICTED: mitochondrial import inner membrane translocase subunit Tim10

GO:

id name namespace
GO:0045039 protein insertion into mitochondrial inner membrane biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573208.2 True 1478 mRNA 0.44 2 8518920 8521118

Neighbor

gene id symbol gene type direction distance location
LOC118936358 unc93b1 coding downstream 156 8508698 ~ 8518764 (-)
LOC118941436 LOC105020884 coding downstream 33617 8479600 ~ 8485303 (-)
LOC118941435 LOC106602153 coding downstream 64855 8447562 ~ 8454065 (-)
LOC110518994 LOC106577271 coding downstream 97516 8413042 ~ 8421404 (-)
LOC110512765 NA coding downstream 120554 8397350 ~ 8398366 (-)
LOC110497208 LOC106610467 coding upstream 394 8521512 ~ 8524314 (-)
LOC110497211 LOC106610489 coding upstream 16909 8538027 ~ 8599474 (-)
LOC118936568 LOC106610491 coding upstream 124471 8645589 ~ 8655482 (-)
LOC110497222 LOC106610496 coding upstream 284344 8805462 ~ 8809619 (-)
LOC118941442 LOC106610527 coding upstream 326883 8848001 ~ 8874372 (-)
G1587906 NA non-coding downstream 42064 8476383 ~ 8476856 (-)
G1587904 NA non-coding downstream 44292 8473688 ~ 8474628 (-)
G1587632 NA non-coding downstream 60077 8458640 ~ 8458843 (-)
G1587628 NA non-coding downstream 75259 8442813 ~ 8443661 (-)
G1587626 NA non-coding downstream 84429 8434029 ~ 8434491 (-)
G1587916 NA non-coding upstream 23940 8545058 ~ 8547984 (-)
G1587921 NA non-coding upstream 56141 8577259 ~ 8578053 (-)
G1587937 NA non-coding upstream 92703 8613821 ~ 8617542 (-)
G1587890 LOC106610535 non-coding upstream 109143 8630261 ~ 8633689 (-)
G1587894 NA non-coding upstream 122883 8644001 ~ 8644233 (-)
G1587567 NA other downstream 184042 8243558 ~ 8334878 (-)
G1587522 LOC106598223 other downstream 293887 8146257 ~ 8225033 (-)
LOC110500908 LOC106592107 other downstream 625641 7886301 ~ 7908783 (-)
G1587221 NA other downstream 745486 7773043 ~ 7773434 (-)
G1586560 NA other downstream 1639163 6879326 ~ 6879757 (-)
G1588003 LOC106610497 other upstream 381737 8902855 ~ 8953676 (-)
LOC118941443 NA other upstream 446178 8965525 ~ 8971363 (-)
LOC110498432 NA other upstream 1615742 10134147 ~ 10145900 (-)
LOC110497368 LOC106610221 other upstream 2603270 11115879 ~ 11212126 (-)
G1590098 LOC106577701 other upstream 2749398 11270516 ~ 11270818 (-)

Expression


Co-expression Network