LOC110497208 (LOC106610467)


Basic Information

Item Value
gene id LOC110497208
gene name LOC106610467
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8521512 ~ 8524314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954137.1
GAAAGGAGAAAGTAGGAGAACCTCAtggaaaggagaaaggaggaggagaaccacagggaaaggagaaaggaggaggagaaccacagGTAAAGGAAAAAGGAGGAGACCCACAGGTAAAGGAGAACGGAGGAGGGGAACCACAGGGAAAGGACGACAAGCGAAAGAAGTGCAGGAAAAGGGTGAGGCTCAGGGAGGGACACGgcaaaggagagagagcagagttgtTCCAGAGACTACCTGTGCTGTCTAAATCTAAAACAGTTGCTCAAAAGCCTAGCTCGCTGACAACTTCCCCCAGTACCCATGAAGAGCAAGTTCCTTCCAACTGTTCAGGGATTGGAACCGGAACCATTCTGCAACCCCCGCCGTCGGGTCATCCACAGAACTCCAGTCCAAAAAGATCTGGAGAGACCGAATCAGACAGAGACCCATTGAGACCCCCTGCTGTCAAGCGGACCCCCTCCAAGGGTCGGGCACCCACTGTGTGTCTCAAGAAGTTCCAAGAACTCCTGAAGCACAGGCACCAAAAGACGAGGAAGTCCACCAAAAGCAAGGAGACAAAAGAAAGTGAAACTGAAGTTCAGAAACAAAGTGAAAGAAAATTATTGAAACCCAACGAAAGTGACAACGGTCAAAATGAATCAAGACTGATGAACAAAAACACAAGTTCCTCCCAGTCTCTAGAAAGAGAGTCGGCCATTAGACCAACCGTTGATAATGACGATCAGACCAACCGAACAGAGAGCGACCATCCAGAGGAAAAAGATGGAGGACACGACAGCAGCACTTGTGGACAGGAGACGGAGTATcaagatctcatctacaaagaGACTGAAAGAGAAAACGTTGAGGATGGAGAACATTTTGAGAACAGAGAAAACGTTTTAGACGGGGAAAACGTGGATGCGTCAGGAGACTTTTTCAAACTCCGAGAGGAGCTGGCTACCTTGTCAGTTTTATCGATGACAAGGACAAAGGAAATGGTGGATCCTCATCGGAGCGACAAAGGCAACAAGGATGGAAGATATCTGGTTTccaaggagaacagagagagggaaacagactcGTCTACAGAGACAAACAAGAAGACCGAAAAGGGAAAAGGATCCGTGGTGGAGGCGTATAGGAGAAGTTTGATCATCCAAGAGGTGGAGGAGAAAATGGAGGATGGGTATTTGGAGATGGAGATCTCCAGCGAGGAGTTGGATGTGGTTGATGAGGTCCAGCAGACGTTGGGCTACGCCGGGGCTGAGGAAGTGagtggggaagaggaggagatagatGTAGAGGAGATGGGTCCAACGATGTATCCTGATGCAGCTTGGCAAGAGGTTCCCGGCGCCAGAGAAGTGGACCAAGCGAGTTCCACCATGGCCAGCTTCAGAGGCATCACCCACAACCAAATCCACCTCCCTCAGAAAATCAAAATGGCGACCGCTGCCCCCGAGATGGCCGACGTGAGTATTCCGACCCCTCTGGAGGCAGAGCCTTTCACGCTGACATCACGAAGGGTCACCACGGGGTCAACAGGAAGCTGGGagccagaggaggaagaggacgtgGAGGTGGACGTTCTTGAGTGGTCGCCGGATGTGCGACCAAGAGTGTGGGGAGTGGGACTTGAGCAAGGCGTCACAGAACTGACCGAGGAAGAAGAGATAGACGTGATGGGAGAGGAAACGGACTGAGTAAGTGGGATGGTGTACTCTTAGGGACGTGTTAATTTAGAATCCAGTAAAAAATAATTGGAGAACGCAAGTGTGTATTCTTCAACAGAAAGGCTAGctttacatttgtgtgttctTCATTGGAAACGTTTGTTATTTGCCACAGATTCTAAACAGTGTGTTCTTGAGAAGAAAGGCTACCGTTCCTAAGCAACCTCCCCGCTCCTCCTCTCCACACTGTTAACTATCGGAGCAGCCCCAACCTTCCACACTGACTTGATGAGACTAACTCACAAAATGAGGGTCTcgctatataaaaaaaaaaaaacctttgttgattgtgattttgttgttgttgtttttgttgtaacTGTTCTTCAGCAGAGTGCCTTATGAGCCCTAGACTAGAGACTCGGCAAACGCAGCTACTCTTTTGTTACATTTCAGGGCCTGTATTGACAGCTTCTCAGAGTACgagtgcagatctaggatcagtttctcCTTTCAAGTCATAATGAGTAACAGGGCCTACTCTGAGACGCTGGTTAATACTGGACCCTGGTGTTCATGCTGGTTATTTTTATACCTTCAGAATCAGTCAGTGTCCAATCAGAAGCACTTAAATATGTTTACATCTGCCACTTTTGACAagttctttattattattatttattatttgtaGCTTCATTGTTTGTATAACTTTGTAAATTAGAAAGAAGGCCTGTCATTTAAATATAATAATTGTGTTGTATTAAAATGGCTTTATTGACCACAGCTGTCTAATAGATTTGTTTTCCCAAGCACAGCCATTTTGTATTTGCTTAAACCTAGCTATTGAAGTAAACATTTAACTTTGCCTACTA

Function

NR:

description
uncharacterized protein LOC110497208

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954137.1 True 2530 mRNA 0.47 2 8521512 8524314

Neighbor

gene id symbol gene type direction distance location
LOC110497209 timm10 coding downstream 394 8518920 ~ 8521118 (-)
LOC118936358 unc93b1 coding downstream 2748 8508698 ~ 8518764 (-)
LOC118941436 LOC105020884 coding downstream 36209 8479600 ~ 8485303 (-)
LOC118941435 LOC106602153 coding downstream 67447 8447562 ~ 8454065 (-)
LOC110518994 LOC106577271 coding downstream 100108 8413042 ~ 8421404 (-)
LOC110497211 LOC106610489 coding upstream 13713 8538027 ~ 8599474 (-)
LOC118936568 LOC106610491 coding upstream 121275 8645589 ~ 8655482 (-)
LOC110497222 LOC106610496 coding upstream 281148 8805462 ~ 8809619 (-)
LOC118941442 LOC106610527 coding upstream 323687 8848001 ~ 8874372 (-)
LOC118941444 LOC106610501 coding upstream 433751 8958065 ~ 8960469 (-)
G1587906 NA non-coding downstream 44656 8476383 ~ 8476856 (-)
G1587904 NA non-coding downstream 46884 8473688 ~ 8474628 (-)
G1587632 NA non-coding downstream 62669 8458640 ~ 8458843 (-)
G1587628 NA non-coding downstream 77851 8442813 ~ 8443661 (-)
G1587626 NA non-coding downstream 87021 8434029 ~ 8434491 (-)
G1587916 NA non-coding upstream 20744 8545058 ~ 8547984 (-)
G1587921 NA non-coding upstream 52945 8577259 ~ 8578053 (-)
G1587937 NA non-coding upstream 89507 8613821 ~ 8617542 (-)
G1587890 LOC106610535 non-coding upstream 105947 8630261 ~ 8633689 (-)
G1587894 NA non-coding upstream 119687 8644001 ~ 8644233 (-)
G1587567 NA other downstream 186634 8243558 ~ 8334878 (-)
G1587522 LOC106598223 other downstream 296479 8146257 ~ 8225033 (-)
LOC110500908 LOC106592107 other downstream 628233 7886301 ~ 7908783 (-)
G1587221 NA other downstream 748078 7773043 ~ 7773434 (-)
G1586560 NA other downstream 1641755 6879326 ~ 6879757 (-)
G1588003 LOC106610497 other upstream 378541 8902855 ~ 8953676 (-)
LOC118941443 NA other upstream 442982 8965525 ~ 8971363 (-)
LOC110498432 NA other upstream 1612546 10134147 ~ 10145900 (-)
LOC110497368 LOC106610221 other upstream 2600074 11115879 ~ 11212126 (-)
G1590098 LOC106577701 other upstream 2746202 11270516 ~ 11270818 (-)

Expression


Co-expression Network