LOC110497213 (LOC106610529)


Basic Information

Item Value
gene id LOC110497213
gene name LOC106610529
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8670919 ~ 8707687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955476.1
GTAATTTCGAAAACTTTTCTCTCCTCCTGTTGCTTCATCCCAGGTTTTACGACTTGCAAGACAGCAGGAGAAATGATTAATTTGGGACCAGACCAGTCCTCTTCAGGATTGTGAGACCTCCTCTCTGAGAGTTATAATGAGTCATCAGGGGGCTGAGGGTAGAGCCATCCCTAAAAAAAGACAGAAGGATGGGTCACCAAACAAGGATCTTGATGAGACCATGGACCCTGATATGAGAAACAATTTGAAGCATCTCCAGCTACTTCCAGCTAGTCATATGTCTATGAGTGACCAGTCAGTGACTTCAAGCAGAGACCCAAGTGATGATGGAGACCAAATAATCGATGAAAGGGTCCATCTGCGGAGACCAGTGTCACCAGCTCCCAGTTATATATCCATGAAAAGTGATCAATCTATGGGTATCCCTCTTAGATTCAAAGAGGGAAACTTATCTCAAAAAGAGGAAGTCCTTCTGGAGAGAGCAGAGTCTCCGACTCCGAGTTATGCATCAGCAAACAGTCACCAGTCAATGGATACGGAtgaggaagacgaggaggagaacTCGGCTCCAAAAGAGAAGCCAGGAGAGGTGGTCTGTGATGTATGTGAGGTCCAAGCTGTGAAGTCCTGTCTGACCTGCACTCAGTCCTACTGTGAGACCCACGTTAAGAAGCACTACACACTACCTAAACTACTGAGACACACCCTGGTGGAGATGACTGGAGACCTGGAGGAGAGACTCTGTCAGGAACACCACAGAGCTCTGGAGGTGTTCTGCAGGACAGACCAGAAGCTGATCTGCTTGGAGTGTTCAGTGACAAAGCACAAAGGTCATGACACAATCATTGAAGAGATAAAACAAGCTGGAAAACAGACTTTTGATAGAGATCAATGTCGAAGACTAAAGCTGGCCTCAATTGACGTGCTCCCCCTTCCTGGTGAGATCCAGTTCTCGTCCGTGACATCAGGCTCTGTGTCTCTGAGCTGGGGTTCTCCTGAGGGACTGACAGGACCACAGACTTTCAGAGTGACCTGGGGATgtgatggagaagagaggagcctGAGGGTGGAAGATGGGTTTAATGTTGAAATAGATGGACTCCAGCCTGGTAAAAAGTACCAGTTCAGTGTGGCTTCAGAGGGAGAAGATGGCAGACAAAGCAGACGGATCTCAGCATCTGTATTCACTGTGGTCCCAGCACCCATGGACTTACACATAAAACAGTCTGGAGCGACCTCCTTCACTGTCAGTTGGTCCAAGGCTGAAGAATTGGAGAAAGTCCCACAATGCTTTCTCATATCCTACTGCAGCCTGGGAACAGAGACCCGCTCTGCCAATACTGAGGACTCCTACAGAACTCTCTCTGGCCTGCAACCTGGTACTCAGTACAACATCAGTGTCTCAACTGTGTTGAACAATGGGGAGCAGAGCAAACCTCTCTCTACAACCATCTGCACAAACCCTTCGCCTCCAGGAAATCTTGTTATATGGTCCTATAGTGCGACCTCTGCTAAACTGATCTGGGATCATCCTGATGGCATGGAGGACATCCTGCACCACTTCAGGGTGACATGGTGTGACAATGCCAGTCCAAGTGAGTCCTTCACTACCAACAAGATCTTTGGAAATGTTACTGGTCTGACGCCAGGGACAGAGTACAACATCACTGTCTGCACCATTGACaagagaaatatggagagtgacCCAGTCTGTACTACCCTACATACAAAGCTCACTTTGAACCGTTTTATGCAGAAGTTGGGACTGACACAGCATTTTGAGGAGAAACTGTCGTTGAATGCCGTGCTTTCAATCGATGGCCTAACGTTAGGAAAGAACCATACGGTAACTCCTCAATCTCTACCGTGGTGTTTTCTGAAAGAACTGATGAGGATGAACGTCTCAGCAAGGGATGTAAAGTACACCCCCATTGATGAGAAGGATCATATGAAGGTAAACCCCCTTGACCTGATTACAGCCCTGTTTCTGTGTTCAGATGGTTTCCTGCAGCAGGAGATGGTCCAGAAAATGTCCATGTGTCAGTTTGCTGTTCCTCTGCTGCTGCCCAACTGTGACACAGAACAAATCACTTTGATGCTGTGGGCCTTGAGGGACATAGTGAGGAAGTTTAGACCCTCTTCACAAGCTGACTCAAAGTCCTTCATAGAGGAGAGAATTGTTGTCTCTGGTATTCCTATGGTGTCCTTTGTTAGGATAGGAAAGAGCAGCTTGTCCAAGTCTCAGATTTTGAACAAGTTGCTTAGTAACCCTCAACAGTACAATGACACATTTCTTCATCATGATATGGAATGTGGCGATTTCCCTCGGCAAATCTCAGATGGTCTGGTTGAAATCAACTGGTACCTTCCATGTGGGAACAGAAACATAGACATCTTCACTAAGCCTATGGTGGTGGCCAATCtcagaggagacatcaggtcctTTGAAAAACAGTTCTCCTTTCTGTGTCAAACATCAGCTGCAGTTTACATTTTTTGTAATGAATTAGATGCATATTCTGAGATTTTGAAACGCAGAACTGGAAAAGCAGAGTTATTTCTGGTTGTTGACTCTCAGAAAAATAAAatcacagaaaacacattgagaAAACTCACCACAGAATTCAGTATCAAGCCAACAAATGTGATTGTTAAGGAAAATGAAAATGATGCAGAATTTGTAAAAACCTTGCAGTCATCTGTCGGTGACATCACCGAAACAAGTCCAAACAAACTGCCAATTGAAAACATGGCTGACGAGGCTCATCAGTTTGGGATTCTGGTTGATGAAGACAGTGATGAGTGTCAGAGTGCCAGGAAGACAGCAaatgaaatcaccaggaacatcACAGACACAATTAAATTCAAAGATGAACAGCTACCCTTACAGGGAACAATCTGGAAAGAGCTTTCCCagttggagaaagagagatgtagactGAGAAAAGCAGGGGGTCAGGAAATTGAACACTACAAGAGCTCTCTGAAGAAAAGGGAAATAGAACTGAGAGAGGAGCAACAAAGATTTGAGATGACAAAAGCAATAAAAAACATAACTGGCATGTCAAGCTCAAAAGTGGAGCGATCCTATTTCCTCAAATGGATGCAGATTAATTTGGACAATCTGTCTCGGCAGAACTTGTCTGGTTTGCGGAAGCAGTACAAAGAGCTTTGCCAAAATCATCCAGAGAAAAAAGACATTGCCGATTTGGATAGGCAAATGTGTGACTGTTCCCTGGGACTTGAACACTTCCTGCGTGAGTTGGGCCAGCTGTATGAAGCTTCCTGCTATCTCCCTAAAGACAATCCAGAATGGAAACAGATGGAGCATCTCCCTGGATTGTGTGCTCAGATGCTGTTGGATGGTTTCCCCATTGAGCTTGTGGATGGAGATGCATCAAATATCCCTCTGAAATGGATATCAGCTGTTCTGACTGAGCTTCATACTCTTGTGGAATCCAACAGCAAGATCCGGGTCGTCACAGTTTTAGGGGTCCAAAGCACAGGGAAGTCCACTCTCCTCAACACCATGTTTGGGGTTCAGTTTGCTGTCAGCAGTGGAAGATGCACCAGAGGGGCCTTCATGCTGCTGATTAAAGTCAACAAAGAACTCAAGGAGGAGCTGAAATGTGACTTCATCATGATCATTGACACAGAGGGGTTGAAATCACCAGAGTTGGCTCAACTAGATGACAGCTATGAACATGACAATGAACTGGCAACACTGGTGATTGGACTCAGTGATGTCACAATAATTAACATGGCCATGGAGAATTCCACAGAGATGAAAGACATTCTACAGATTGTTGTTCATGCTTTTATCAGGATGAAGGAAGTGGGGAAGAAGCCGATATGTCATTTTGTGCACCAGAATGTGTCAGACATCTCTGCTCATGACAACAACATGAGGGACAGGAAGAAGTTGTTGGAACAGTTGAATGAAATGACCCAGGCAGCAGCCAGAATGGAGAAGAAGGAGAATATCACTAAGTTCACTGATGTGATGGAGTATGATCCAGACACAAGCAGCTGCTACATCCCAGGACTCTGGCATGGGACTCCCCCTATGGCTCCAGTCAATGCTGGCTACAGTGAGGCTGTGTATGATTTCAAAAAGAGCTTGATGCAAGACTTAATAAAATGCCAGAGTAATGATGACATTACACATTTCCTGAAGTGGACACAAAGCTTGTGGGAGTCCGTGAAATTTGAGAAATTCATCTTCAGTTTCAGAAACAGCTTGGTTGCAGATGCATACTCCAGATTATGCTCTGAATACAATGGTTGGGAATGGAACTTCCAGAAGGAGATGTATTCCTGGATTGTAAGTTCTGAAACCAAAATGTCAAACTTTGGCATAACAGATCTAAATCCCCAGAGGTCCATAAGAGATGTGCTAAAATACTTGATGATAGAAGCATCTGAGAAACTGTCATTGGGAGAAAAGGAAATCCAAGACAATCTAGTAAAATACTTTGAAATTGAAGATGGCAATGTCAATCTGGTGGAGAAATACAGGGAGGACTTTGTGTCCAGTGCCAAAACACTGAGacgagagacagaaaacacagtgAGGAACAACCTGCATGGAGGTGTTGAGATCAAAGAAGGAATGACAGAACTGAACAACATCAAGAGTTCTCAGACAAGTACAATGGAGAGAAAGGTGCTGGCTTTGCTGCAAACCTGTAGACAGAAAAAAACTGATTTATCAGATCAGGAACTCCAAGAAGAGTTTGAAAGTATGTGGGAGGAAACTCTGTCTGAGATCAATTTTAGTGGACTGCCAAGGAGAGATGTGGCTCAGGATGCCTTCCTCATGTTAAGTGGAAATCTTTCACTAAGGGGGAGTCATGTAAATAGTATGTTGGTAAGAAACAATTTGGTGGATTGTGGGAAGACAGACTTTGTTGTGAAATCAGTTCATTGGTGGCGGAATGCTGAAGGCTTTGCAAAGCACATGGATCATTACCATCACAGGAAAAAACTACAAGTCTTCTGTGATGACATCATAACACAGTGTCAGGAGTTTATAACCCAGAAGGTGGAAAGTAAAACAGATTACCATGATACTTACATCAAAGAGCTGCTGAACAGGATTGATGAAACaattaaacaaaacaagaaacgtaaaGTTAATGAAGAGTGTGAGATCCATCTGAAGCTACACATCTGTGGCATAGCAGTCAGAGAGTTCCAGAAGATGCATGATGATTTCATTGTATCCAACGACCCCCGAATGTGTCTGGAACAGTCTAAGAACAAGTACCTTACTGATTTCAAAGACTTATTTCATAACCGAGACCAGTGCCTAAAGAAAGCTGAGGAGTTCTCAAAGCTCTTACAGCCAGCTGTACAGGACTATGTGAGCAAAATGATTGGTCCTGATGTAGTTGATGAAATGAAGACTGGTAAAGGGTCAGAGGATTACAGCACACGGAcgtccttccagttctctgttctgAAACAGCTCCTGACTGATGGAGAATATGAGAAATATAGAAAGTACATAAGGAATTATGAAAAGTTTGTGAAGGACTGGCTGTTTGACCAGATTGTCCAACAACTCTCAAAGGACAGCAGACTGGAGAAATCAGAGAAGAAACATCTTTCAGAGATAGTCAAGATAATCACTGATGCCATTTCTATCAGAAAAACACATAGCACTATAGAATGCATCAAGACTTTCATTCAAAACATCTGCAGTGCTCTTGGAGAGAAGCTTGTCTTTCCAAAGGATGCTCTGGATTCCGTTATGATTCTGAACTCTGCAAACACAGATCAGTTTGCTGACTACCTCACAGAGTTTGTAGGGGAAATGAAGCAGACCGTGACATCAGAGTATGAACAGAGGACTGACATCAAAGAGAGGCTCAGATCTCTGCCATTCAAGCCTCAGGACAATATGTTCACCAGCCAGTTTGGCTGTGGGGAAGTATGTCCCTTCTGCGGTGCACCCTGTGAAGCAGGAGGGAAGGATCATGCCAAACACTTCACCTCCATTCACCGTCCACAGGGTGTCAGGGGTTGGAGGAATTTAAAGACAAAGGTGTTATGGACTAATATATGTTCCTCTGATGTGATTAGTGATAACACATTCCGGACCTCCCTGACAGGAGACAAACCTCACCCCTACAAGGACTACCAGACATATTACCCTGACTGGATCATAACTGGAGATTCCAGCATTGAAGCTTCAGACTACTGGAAGTATGTGATGGCCACATTCAATGAGAGTATCGCTAAAGACGAGGGAGACTCAACACTTCCTGCTGATATCCCAGAGGACTGGAAGGTATTAACACATGATGATGCAATGAAGAGCTTGAAAAACATATTCAACATGAAATAAAGTGGAAAATGATAGCATGACTCTTCTTGACTCAAACATAAAATTGGCCAATCAAAGATATCAGACATGGCAACCAGAAATAACTCACCGAGCATGAACATGGCAACACAAAGCCAAGAGCCATTCAATCAATCACAACTTTTGAAATAAATAGCACTTCCAAAACAATTAGTgatttgaaaaacaacaaaaagggGCCCCCGACACTAGTTTTGACATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATGACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATGACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAATATAACATTACATGTTGGTATTCAGCTGATGAATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAATAAAACATGACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAATAAAACATGACATGTTGGTATTCAGCTGATGGATGGGGCTATGGCAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGACTAGTAAACATTACATGTTGGTATTCAGCTGATGGATGGGGCTATGGAAATGA
>TU1817946
CCAGGTTTTACGACTTGCAAGACAGCAGGAGAAATGGTAGGTTcatatttttattattaaagtcaGGTGTAAGATTCTTTGGGAGTCGATTCTTATTCAACTCAACGAAACTTGCTTTTAATAAAGGCCCGATTTTTCAACTTCTTTCTAATAAATGGCAAGTAAATAAATCTAGTACTCCGCTAGGCCCAGTAGCATAATGGCGGAGTGCGCACAAGGAATACCACGAAAAGTGTTCTCTTTCACACAGCTACCAGACGCTGAGATTTAAGATATTTAGCGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955476.1 False 7504 mRNA 0.43 11 8670919 8707687
TU1817946 True 285 lncRNA 0.39 1 8670958 8671242

Neighbor

gene id symbol gene type direction distance location
LOC118941439 NA coding upstream 27298 8640309 ~ 8643621 (+)
LOC110497214 LOC106610534 coding upstream 30695 8627294 ~ 8640224 (+)
LOC110498609 LOC106610517 coding upstream 44073 8611926 ~ 8626846 (+)
LOC110534718 NA coding upstream 61575 8608164 ~ 8609344 (+)
LOC118941437 LOC106594846 coding upstream 164263 8499287 ~ 8506656 (+)
LOC118941438 LOC106610528 coding downstream 5999 8713686 ~ 8741009 (+)
LOC118941440 LOC106577279 coding downstream 76180 8778760 ~ 8802053 (+)
LOC118941441 NA coding downstream 112455 8820142 ~ 8824446 (+)
vwa11 LOC106610525 coding downstream 167422 8875109 ~ 8904658 (+)
LOC110518381 LOC106610525 coding downstream 201773 8909460 ~ 8953635 (+)
G1587720 NA non-coding upstream 4560 8665669 ~ 8666359 (+)
G1587712 LOC106610491 non-coding upstream 16270 8654182 ~ 8654649 (+)
G1587711 LOC106610491 non-coding upstream 16813 8653515 ~ 8654106 (+)
G1587710 LOC106610491 non-coding upstream 17906 8652646 ~ 8653013 (+)
G1587738 NA non-coding downstream 17176 8724863 ~ 8725236 (+)
G1587741 NA non-coding downstream 27154 8734841 ~ 8735293 (+)
G1587751 NA non-coding downstream 98799 8806486 ~ 8807944 (+)
G1586672 NA other upstream 1614450 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2308607 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2500092 6169580 ~ 6170827 (+)
G1585804 NA other upstream 2858066 5808978 ~ 5812853 (+)
G1585483 NA other upstream 2955544 5643756 ~ 5715375 (+)
G1587727 LOC106598223 other downstream 31857 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 193299 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 285767 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 635172 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 716078 9422781 ~ 9425478 (+)

Expression


Co-expression Network