LOC118941441


Basic Information

Item Value
gene id LOC118941441
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8820142 ~ 8824446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037650.1
CTCTGAATGAACGCCTCTCTGAGGAAGATGCAGGCGGGGCCCACGATGTTGTGTAGAACGGTGCAGTTCTGGACCACAGCACACAACGGCTCCTCAAACACTCTTCTCctttcatcttcctcctcttcttcctccaggGCCCCCACACCCCCCGGCATTGCCGCCGCAGCCAATGGGGCTCCGCTCCCCTCCGAGGGCAATACCCCCTTAGGGAGGGGAACCAATCAGATTGATTAACCAACCACATGCCAACCAATCAGAATGATCAGAAAAAGTGTGTTCAGCCAATAAAAATGGCAGATGTTTTGGGTTCTTGGCCAGCTGTTCTTTCTGTGTGGATCTACCCAGCAGGACTTGGGTTCCAACAGAAGATAAAGGCATTGCTTGGATTTAAACAGCCAGCGTAGTAATACAGTTTAAATACTGCTTAAAGCAGGGGTTACATGAGACTCCTGctttagaacatttagaatgcaaTATCAAGGAACGTTTAGAATGTCTAggaacatttagaatgtctaggaacatttagaatgtctaGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTCGAATGTCTAggaacatttagaatgtctaGGAATAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAggaacatttagaatgtctaGGAACAGTTAGAATGTCTAGGAACAGTTCGAATGTCTAggaacatttagaatgtctaTGAATAGTTAGAATGGCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAggaacatttagaatgtctaGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTCGAATGTCTAggaacatttagaatgtctaGGAATAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAggaacatttagaatgtctaGGAACAGTTAGAATGTCTAGGAACAGTTCGAATGTCTAggaacatttagaatgtctaGGAATAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACAGTTAGAATGTCTAGGAACA

Function

NR:

description
calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037650.1 True 1211 mRNA 0.41 2 8820142 8824446

Neighbor

gene id symbol gene type direction distance location
LOC118941440 LOC106577279 coding upstream 18885 8778760 ~ 8802053 (+)
LOC118941438 LOC106610528 coding upstream 79133 8713686 ~ 8741009 (+)
LOC110497213 LOC106610529 coding upstream 112455 8670919 ~ 8707687 (+)
LOC118941439 NA coding upstream 176521 8640309 ~ 8643621 (+)
LOC110497214 LOC106610534 coding upstream 179918 8627294 ~ 8640224 (+)
vwa11 LOC106610525 coding downstream 50663 8875109 ~ 8904658 (+)
LOC110518381 LOC106610525 coding downstream 85014 8909460 ~ 8953635 (+)
LOC110497233 LOC106602251 coding downstream 136153 8960599 ~ 8981315 (+)
LOC110497235 LOC106610498 coding downstream 159893 8984339 ~ 8994686 (+)
LOC118936441 LOC106610520 coding downstream 185332 9009778 ~ 9015559 (+)
G1587751 NA non-coding upstream 12198 8806486 ~ 8807944 (+)
G1587741 NA non-coding upstream 84849 8734841 ~ 8735293 (+)
G1587738 NA non-coding upstream 94906 8724863 ~ 8725236 (+)
G1587799 NA non-coding downstream 97814 8922260 ~ 8937642 (+)
G1587824 NA non-coding downstream 132656 8957102 ~ 8957976 (+)
G1587831 NA non-coding downstream 146991 8971437 ~ 8973548 (+)
G1587814 NA non-coding downstream 211177 9035623 ~ 9037395 (+)
G1586672 NA other upstream 1763673 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2457830 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2649315 6169580 ~ 6170827 (+)
G1585804 NA other upstream 3007289 5808978 ~ 5812853 (+)
G1585483 NA other upstream 3104767 5643756 ~ 5715375 (+)
G1587790 LOC106610525 other downstream 76540 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 169008 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 518413 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 599319 9422781 ~ 9425478 (+)
G1588532 LOC106610266 other downstream 986602 9798537 ~ 9814485 (+)

Expression


Co-expression Network