LOC110518381 (LOC106610525)


Basic Information

Item Value
gene id LOC110518381
gene name LOC106610525
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8909460 ~ 8953635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954153.1
tGGCGGTACAGTccagtatatatacaggtgtACTGTATCTTCCAGAGTGTTCCTCTACACTTTGGGTTACTGCTGCaacagagacagggaaagaggaagagatcCAACTACGCTAAAATAACCTGAGAAGCCACCCCCCACTCCACAAAAGACTGATGATGTCACCGGTGCTGGGTGTATCCTTCCTGGCCCTGGTCCTATCAGGAGGAGCCTGGGCGTTTGCTCCCATTGGGGGCGGAGCCTCCACCCACGTCAGCATCACGGGAACAGCCGTGCTACAGAAGGTCACAGAGGTGTGCCGAACCATCGCCGAGACAGAGGGACGAGACTTCACCCCCacgGGTAACTCTGCTGAGGAGCTGGTCCAGGCCTGCCTGGGACCCAAAGCAACAGGTGAAGTGTCAGCAGCTAAGTTCAAATCTGCCCTGAATGAGATCTACATACAGAACGGACAGGTGGACAGAGACTTTGTCAACAGCCCAGCCCATCACTTCAACTCAGAGGCGTTTGCTGAGGGCAGGCGCCTTATAACTGATGGGGTGGCCAGCATCAAGGCCAACATACAAAGGGAGAACTTCCTGGCTGccagagagacactggggagagtactgcacacactacagGATTTCTACAGCCACAGTAACTGGGTGGACCTGGGATACACTGAACCCTACGCCAACCTGATCCGCCCCGATCTCCCACTGGAAAACCTGGCAGAAGTCAGCACCCCGACCTGCAGTGACTGTGCCAATGGGGGATTCTGTTCAAACTCCATCCTTCCTAACATCCTTAATGAGAAGAAACTCACCTCTGGGTACATGGGGATCTTGTCCTCAGTTAAGCCTATaggtaAGTGTAGTCATGGAGGTGCAGCTGACCTGACCAGCTCTGAGGTTCCTCGCGGGGGCATCAGCAAGGACGAGCGTCGCTCTGACAACGTGGCCCTGCACACTGCTGCTGTCACCGTGGCAACGACCGCAACCCTCCAGCTGCTGGACGACATCCGGGGAGCCGCCGGTGACAACGACTACCTACGcttcATGGGCATTGCGCGATCGGCAGTGGTTGCTTTTGTGATCGACACCACAGGGAGCATGAAGGATGACATCCTTGAAGCCAAACGAGTCGTCAATGAGATCATCGACAGCAAGAAGGGAACACAGGATGAGCCCTCCCAGTACATCCTGGTCCCATTCAACGACCCAAagttcGGACCCCTGATAAGAACGACAAACCCTGATGTTATGAAAACAGAGATTGCTAAACTCAAAGCTGATGGAGGCGGAGACCTCCCTGAGATGTGCTTATCAGGcctacagttggcGCTGACCGGTGCCCCTGCGTCGTCCCACATCTATGTTTTCACAGATGCCGTTGCCAAGGACATTGCGTTAAGGGACACCATCTTGGCCCTGATCAGGAGCACCAAGTCAGCCGTGTCTTTCTTCATGACTGGTGATGGTGCTGGTGCTAGAAGGAGGAGAAGTGGAGTAGAGTCCAGGGCAGCTACATTCGAGACCTACAAGGACCTGGCGCTGGCGTCTGGTGGTCAGGCCATTGGAGTCACCAAGGAAAATCTGCCCCAGGCCACTGACGTCATCATCGACTCCTCCACCTCCGCTCTGgtgACAGTCCTACAGCGAGCGAGGAACCCAGGCAAAGCTGAGACATTCTCCTTCCTGCTGGACGAGTCTCTGAACAACATCACCATCTACATCACTGGAAAGTCCCTCACCTTCACCCTGAAGAACCCTGCAGGTGTGACCCAGAAACAGAACGAGGCCAACGGGGAACTGGGGACTGTCCAGACGGTGGGCAACCTCTTCCGGGTCCGTCTGGCCTCCAACAAACATACAGGCTTATGGGAAATCAGCATGAACTCCAACCAGCCCTACACACTGAAGGTCACTGgtCAGAGTACCATTGCCTTCATTTATGACTTTGTGGAGACCTTCGAGGGACCACACCCAGGATATGCCCTCATCTCTGGCCGTCCAAAAGCAGgtATGCCTGCCATGCTGTTGGTATCCGTGTTGGGCAGAAAGGGCCCAGCCTCTGTCAAGGTGGCCAACGTTGCCTTGGTGACCGTGTCAGGGTTAGAGGTCGTAGGCGGTACCTTGGAAGACATGGGCAACGGGGAGTTCCTAGTTACGGTAACCAAGGTCCCTGCGGGGGAGTTTGTGGTGCTGTTGAACGGGACAGACGTGGTCTCCTCCACCGTGTTCCAGAGACAGTCCACCACTCAGATGTCTGTCTCCAAGGTTACCATCAAGGCCGTGGTGGACAGAAGCATGGAGCCTGGTAAAACCTTCACCCTTCCCTTCACCGTCATGACCGACACCACTGGAGGCAGTTACAAAATCAGTGCCAGAAACGACAGAGACTTCAAAATGAACGTCCCCGGCAGCATCGCTGTGACCACCGGAGGAAACGCCACCGGTGAACTGACCATCACGGTGCCCGCCAACACACCCTCAGGAACAGACGTCACCCTGACCATCGAGGCTGTGGCGCCCGGGGCCACCGCCGACTCCAATTACGCTGTCCTGCGCCTCTCTGTCGTCTCCAAGGTGACAGATTTCACCCCTCCCCAGTGTGAGGTAGTCAGCGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACATGACCGACGGTGTCAATGGCACAGGGATCGCCAGCCTCACACACCGCCAGGGAGTGGGCAACCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGTTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATGTCACCCCTCCCCAGTGTGAGGTGGTCAGTGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAACTCTGCCTTCTGGCAGCTCTCTGCCAACCTGACAGACGGTGTCAATGGCACAGGCATCGCCAGCCTCACACACCGCCAGGGAGTAGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATGTCACCCCTCCCCAGTGTGAGGTGGTCAGCGTCTCGGTGGTTGACTGCCCAGCTGACCCAGCAGCTTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACCTGACAGATGGCGTCAATGGCACAGGCATCGCCAGCCTCACACACCTCCAGGGCGTAGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGAGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCGGTTTTCCATCGTCCGCAACGCGGGACCGCCCTCCATCGCTCTGTCCCTCCCACTGTTGGTGTGTCTGCTGGTCTCTGCCTTCTTCACTACGTCCCTCAGAGACCTACTTATCTGATCTAATGCtgcgttcataaccaagtgggaatcTGTCATGTAAACGTTGTGAGGTTCATTCACATGCTTAGAACTTGTTGGGAAACACTGATTTGGCTAATGGCCAACCAGCGGCCACAACCATAAACACAAAGTACAGCCATCATGCTTGCCAACTAATTATAGTTTTCAAAAGCCATATTAGATTAtatagatagataaatagattGCTTTTAATAAGGTTTCGCTGCATTTATCTGCTGAAAATGCTGTTATCGAGTTAATTTCCTTAGCAGGTGACATCAGAGGTCTGCATTTGGGAGAAGTTGTAGCTCATGGGTGATagactagtaattaccagttggaggggcGTTCAAGTGGATTTTCCTCTGTCTTATGTGGTAAATTTGGTTACCCACTTGGTTATGGTAATAGGGTAAGGCTCATGTATTGACTGCCTTCCCAGCACTGCCTCTTAATGCTAACGGTTACGTTCCAGGCCGACCATATTGCAGACATTGCATTGCATCAACAAATGCTTTGCGTGATACATCATTGTCGGTGAAATGATGCATCAGATATGATGTGTGAAGCTGATATGTTGAACACCTATCCATGTGTGAACTCTGGCAGGCGTCTGCAAGGTAGTCAGCCTGAAATATGACCAAAGCCACAATGAAAATGAATGTCCCTTTTGTAAAAAACTGCcaacagtactctctctctctaggcactTTCTCAACGTGTTATTTGCACTGTAAGATGTTTTCATTTTTGTAATATAATGTAAGTCTTTAGTTTACATCTGTCATGAATAAAACATATCTGCTTTC
>XM_036954152.1
GGCGGTACAGTccagtatatatacaggtgtACTGTATCTTCCAGAGTGTTCCTCTACACTTTGGGTTACTGCTGCaacagagacagggaaagaggaagagatcCAACTACGCTAAAATAACCTGAGAAGACTGATGATGTTACCGGTGCTGGGCATGTCCTTTTTGGCCCTGGTCCTAtcaggaggagcctgggcattTGCTCCCATCGGGGGCGGAGCTTCCACCCATGTCAGCATCACGGGAGCGGCCGTTCTACAGAAGGTCACAGAGGTGTGCCGAGCCATCGCCGAGTCAGCGGGACGAGACTTTACCCCCAcgGGTAACTCTGCTGAGGAGCTGGTCCAGGCCTGCCTGGGACCCAAAGCAACAGGTGAAGTGTCAGCAGCTAAGTTCAAATCTGCCCTGAATGAGATCTACATACAGAACGGACAGGTGGACAGAGACTTTGTCAACAGCCCAGCCCATCACTTCAACTCAGAGGCGTTTGCTGAGGGCAGGCGCCTTATAACTGATGGGGTGGCCAGCATCAAGGCCAACGTACAAAGGGAGAACTTCCAGGCTGccagagagacactggggagagtactgcacacactacagGATTTCTACAGCCACAGTAACTGGGTGGATCTGGGATACACTGAACCCTACGCCAATCTAATCCGCCCCGATCTCCCACTGGAAAACCTGGCAGAAGTCAGCACCCCGACCTGCAGTGACTGTGCCAATGGGGGATTCTGTTCAAACTCCATCCTTCCTAACATCCTTAATGAGAAGAAACTCACCTCTGGGTACATGGGGATCTTGTCCTCAGTTAAGCCTATaggtaAGTGTAGTCATGGAGGTGCAGCTGACCTGACCAGCTCTGAGGTTCCTCGCGGGGGCATCAGCAAGGACGAGCGTCGCTCTGACAACGTGGCCCTGCACACTGCTGCTGTCACCGTGGCAACGACCGCAACCCTCCAGCTGCTGGACGACATCCGGGGAGCCGCCGGTGACAACGACTACCTACGcttcATGGGCATTGCGCGATCGGCAGTGGTTGCTTTTGTGATCGACACCACAGGGAGCATGAAGGATGACATCCTTGAAGCCAAACGAGTCGTCAATGAGATCATCGACAGCAAGAAGGGAACACAGGATGAGCCCTCCCAGTACATCCTGGTCCCATTCAACGACCCAAagttcGGACCCCTGATAAGAACGACAAACCCTGATGTTATGAAAACAGAGATTGCTAAACTCAAAGCTGATGGAGGCGGAGACCTCCCTGAGATGTGCTTATCAGGcctacagttggcGCTGACCGGTGCCCCTGCGTCGTCCCACATCTATGTTTTCACAGATGCCGTTGCCAAGGACATTGCGTTAAGGGACACCATCTTGGCCCTGATCAGGAGCACCAAGTCAGCCGTGTCTTTCTTCATGACTGGTGATGGTGCTGGTGCTAGAAGGAGGAGAAGTGGAGTAGAGTCCAGGGCAGCTACATTCGAGACCTACAAGGACCTGGCGCTGGCGTCTGGTGGTCAGGCCATTGGAGTCACCAAGGAAAATCTGCCCCAGGCCACTGACGTCATCATCGACTCCTCCACCTCCGCTCTGgtgACAGTCCTACAGCGAGCGAGGAACCCAGGCAAAGCTGAGACATTCTCCTTCCTGCTGGACGAGTCTCTGAACAACATCACCATCTACATCACTGGAAAGTCCCTCACCTTCACCCTGAAGAACCCTGCAGGTGTGACCCAGAAACAGAACGAGGCCAACGGGGAACTGGGGACTGTCCAGACGGTGGGCAACCTCTTCCGGGTCCGTCTGGCCTCCAACAAACATACAGGCTTATGGGAAATCAGCATGAACTCCAACCAGCCCTACACACTGAAGGTCACTGgtCAGAGTACCATTGCCTTCATTTATGACTTTGTGGAGACCTTCGAGGGACCACACCCAGGATATGCCCTCATCTCTGGCCGTCCAAAAGCAGgtATGCCTGCCATGCTGTTGGTATCCGTGTTGGGCAGAAAGGGCCCAGCCTCTGTCAAGGTGGCCAACGTTGCCTTGGTGACCGTGTCAGGGTTAGAGGTCGTAGGCGGTACCTTGGAAGACATGGGCAACGGGGAGTTCCTAGTTACGGTAACCAAGGTCCCTGCGGGGGAGTTTGTGGTGCTGTTGAACGGGACAGACGTGGTCTCCTCCACCGTGTTCCAGAGACAGTCCACCACTCAGATGTCTGTCTCCAAGGTTACCATCAAGGCCGTGGTGGACAGAAGCATGGAGCCTGGTAAAACCTTCACCCTTCCCTTCACCGTCATGACCGACACCACTGGAGGCAGTTACAAAATCAGTGCCAGAAACGACAGAGACTTCAAAATGAACGTCCCCGGCAGCATCGCTGTGACCACCGGAGGAAACGCCACCGGTGAACTGACCATCACGGTGCCCGCCAACACACCCTCAGGAACAGACGTCACCCTGACCATCGAGGCTGTGGCGCCCGGGGCCACCGCCGACTCCAATTACGCTGTCCTGCGCCTCTCTGTCGTCTCCAAGGTGACAGATTTCACCCCTCCCCAGTGTGAGGTAGTCAGCGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACATGACCGACGGTGTCAATGGCACAGGGATCGCCAGCCTCACACACCGCCAGGGAGTGGGCAACCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGTTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATGTCACCCCTCCCCAGTGTGAGGTGGTCAGTGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAACTCTGCCTTCTGGCAGCTCTCTGCCAACCTGACAGACGGTGTCAATGGCACAGGCATCGCCAGCCTCACACACCGCCAGGGAGTAGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATGTCACCCCTCCCCAGTGTGAGGTGGTCAGCGTCTCGGTGGTTGACTGCCCAGCTGACCCAGCAGCTTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACCTGACAGATGGCGTCAATGGCACAGGCATCGCCAGCCTCACACACCTCCAGGGCGTAGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGAGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCGGTTTTCCATCGTCCGCAACGCGGGACCGCCCTCCATCGCTCTGTCCCTCCCACTGTTGGTGTGTCTGCTGGTCTCTGCCTTCTTCACTACGTCCCTCAGAGACCTACTTATCTGATCTAATGCtgcgttcataaccaagtgggaatcTGTCATGTAAACGTTGTGAGGTTCATTCACATGCTTAGAACTTGTTGGGAAACACTGATTTGGCTAATGGCCAACCAGCGGCCACAACCATAAACACAAAGTACAGCCATCATGCTTGCCAACTAATTATAGTTTTCAAAAGCCATATTAGATTAtatagatagataaatagattGCTTTTAATAAGGTTTCGCTGCATTTATCTGCTGAAAATGCTGTTATCGAGTTAATTTCCTTAGCAGGTGACATCAGAGGTCTGCATTTGGGAGAAGTTGTAGCTCATGGGTGATagactagtaattaccagttggaggggcGTTCAAGTGGATTTTCCTCTGTCTTATGTGGTAAATTTGGTTACCCACTTGGTTATGGTAATAGGGTAAGGCTCATGTATTGACTGCCTTCCCAGCACTGCCTCTTAATGCTAACGGTTACGTTCCAGGCCGACCATATTGCAGACATTGCATTGCATCAACAAATGCTTTGCGTGATACATCATTGTCGGTGAAATGATGCATCAGATATGATGTGTGAAGCTGATATGTTGAACACCTATCCATGTGTGAACTCTGGCAGGCGTCTGCAAGGTAGTCAGCCTGAAATATGACCAAAGCCACAATGAAAATGAATGTCCCTTTTGTAAAAAACTGCcaacagtactctctctctctaggcactTTCTCAACGTGTTATTTGCACTGTAAGATGTTTTCATTTTTGTAATATAATGTAAGTCTTTAGTTTACATCTGTCATGAATAAAACATATCTGCTTTC

Function

NR:

description
von Willebrand factor A domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954153.1 False 4383 mRNA 0.54 20 8909460 8953635
XM_036954152.1 True 4361 mRNA 0.53 20 8932966 8953635

Neighbor

gene id symbol gene type direction distance location
vwa11 LOC106610525 coding upstream 4802 8875109 ~ 8904658 (+)
LOC118941441 NA coding upstream 85014 8820142 ~ 8824446 (+)
LOC118941440 LOC106577279 coding upstream 108203 8778760 ~ 8802053 (+)
LOC118941438 LOC106610528 coding upstream 168451 8713686 ~ 8741009 (+)
LOC110497213 LOC106610529 coding upstream 201773 8670919 ~ 8707687 (+)
LOC110497233 LOC106602251 coding downstream 6964 8960599 ~ 8981315 (+)
LOC110497235 LOC106610498 coding downstream 30704 8984339 ~ 8994686 (+)
LOC118936441 LOC106610520 coding downstream 56143 9009778 ~ 9015559 (+)
LOC110497247 LOC106610465 coding downstream 74010 9027645 ~ 9033977 (+)
LOC110498615 LOC106602251 coding downstream 99304 9052939 ~ 9064376 (+)
G1587751 NA non-coding upstream 101516 8806486 ~ 8807944 (+)
G1587741 NA non-coding upstream 174167 8734841 ~ 8735293 (+)
G1587738 NA non-coding upstream 184224 8724863 ~ 8725236 (+)
G1587824 NA non-coding downstream 3467 8957102 ~ 8957976 (+)
G1587831 NA non-coding downstream 17802 8971437 ~ 8973548 (+)
G1587814 NA non-coding downstream 81988 9035623 ~ 9037395 (+)
G1587807 NA non-coding downstream 121472 9075107 ~ 9084300 (+)
G1587727 LOC106598223 other upstream 64680 8739544 ~ 8844780 (+)
G1586672 NA other upstream 1852991 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2547148 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2738633 6169580 ~ 6170827 (+)
G1585804 NA other upstream 3096607 5808978 ~ 5812853 (+)
G1587805 LOC106602251 other downstream 39819 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 389224 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 470130 9422781 ~ 9425478 (+)
G1588532 LOC106610266 other downstream 857413 9798537 ~ 9814485 (+)
LOC110534552 LOC106602324 other downstream 875821 9829419 ~ 9847684 (+)

Expression


Co-expression Network