Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941443 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 8965525 ~ 8971363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110494027 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037651.1 | False | 5727 | mRNA | 0.40 | 2 | 8965525 | 8971363 |
| TU1818380 | False | 1804 | lncRNA | 0.41 | 2 | 8966902 | 8968924 |
| TU1818382 | True | 790 | TUCP | 0.39 | 2 | 8967296 | 8968304 |
8,957,000
8,958,000
8,959,000
8,960,000
8,961,000
8,962,000
8,963,000
8,964,000
8,965,000
8,966,000
8,967,000
8,968,000
8,969,000
8,970,000
8,971,000
8,972,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941444 | LOC106610501 | coding | downstream | 5056 | 8958065 ~ 8960469 (-) |
| LOC118941442 | LOC106610527 | coding | downstream | 91153 | 8848001 ~ 8874372 (-) |
| LOC110497222 | LOC106610496 | coding | downstream | 155906 | 8805462 ~ 8809619 (-) |
| LOC118936568 | LOC106610491 | coding | downstream | 310043 | 8645589 ~ 8655482 (-) |
| LOC110497211 | LOC106610489 | coding | downstream | 366051 | 8538027 ~ 8599474 (-) |
| LOC110497226 | LOC106610522 | coding | upstream | 23845 | 8995208 ~ 9004935 (-) |
| LOC110497236 | LOC106610374 | coding | upstream | 66929 | 9038292 ~ 9042976 (-) |
| LOC110497232 | LOC106610547 | coding | upstream | 77176 | 9048539 ~ 9052165 (-) |
| LOC118941445 | NA | coding | upstream | 99466 | 9070829 ~ 9077713 (-) |
| LOC110497251 | LOC100136185 | coding | upstream | 106843 | 9078206 ~ 9095113 (-) |
| G1588029 | NA | non-coding | downstream | 25873 | 8916151 ~ 8939652 (-) |
| G1588004 | NA | non-coding | downstream | 34237 | 8854241 ~ 8931288 (-) |
| G1588022 | NA | non-coding | downstream | 68962 | 8895858 ~ 8896563 (-) |
| G1587991 | NA | non-coding | downstream | 130525 | 8833965 ~ 8835000 (-) |
| G1587990 | NA | non-coding | downstream | 131851 | 8832049 ~ 8833674 (-) |
| G1588056 | NA | non-coding | upstream | 107 | 8971470 ~ 8973876 (-) |
| G1588071 | NA | non-coding | upstream | 45694 | 9017057 ~ 9018392 (-) |
| G1588041 | NA | non-coding | upstream | 62791 | 9034154 ~ 9035467 (-) |
| G1588044 | NA | non-coding | upstream | 66177 | 9037540 ~ 9038194 (-) |
| G1588003 | LOC106610497 | other | downstream | 11849 | 8902855 ~ 8953676 (-) |
| G1587567 | NA | other | downstream | 630647 | 8243558 ~ 8334878 (-) |
| G1587522 | LOC106598223 | other | downstream | 740492 | 8146257 ~ 8225033 (-) |
| LOC110500908 | LOC106592107 | other | downstream | 1072246 | 7886301 ~ 7908783 (-) |
| G1587221 | NA | other | downstream | 1192091 | 7773043 ~ 7773434 (-) |
| LOC110498432 | NA | other | upstream | 1165497 | 10134147 ~ 10145900 (-) |
| LOC110497368 | LOC106610221 | other | upstream | 2153025 | 11115879 ~ 11212126 (-) |
| G1590098 | LOC106577701 | other | upstream | 2299153 | 11270516 ~ 11270818 (-) |
| G1590583 | NA | other | upstream | 2670044 | 11641407 ~ 11641866 (-) |
| LOC110497375 | LOC106610178 | other | upstream | 3106355 | 11933020 ~ 12261321 (-) |
