LOC110514468 (LOC106602219)


Basic Information

Item Value
gene id LOC110514468
gene name LOC106602219
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 9422781 ~ 9425478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954183.1
TTCCTGTGTCTGATATCAGAGCTCAGTAATGCTCAATCTATCAACCACAACAAGGAGAGAACGGTCTCGTTCCAGGCCAACTGTATTGCAGTTGAGTTTGACGCTACGACAAATGAGCATCAAATCGCTATACCATATGATGTGGTTAACTGATATGTTAAACAGTAATCAAGGAGATGTGAGATCTGGCAGGCGAACTCAATGTAGTCAGCCTGGAACGTGGCCAACATCATGAGTggggttggaggagagagagggggcgggacTTGGTTATGAGAGAAGCTTTCAGTAGCCATCATGTTGACTGGCAGAGACAACAGAGGCCATAGGGTGGcagttaactgtcataacatctactgtctatccacaggttaactgtcataacatctactgtctatccacaggttaactgtcataacatctactgtctatccacaggttaactgtcataacatctactctttatccacaggttaactgtcataacatatactgtctatccacaggttactTTGACACTATAACTGTTGTTTTGACAccactataatacagaatatctCTAAGAGATGGAAATCCTATGTGTTCCTGAGAAATGTATGGAACTCATCCAGTGATGTCATTATCAGTCACACAACCTGACAGACTGTGACCATGACAACTGACCACACGGTGCAGTGGTAGACTTGGGGTCGAGGGGAGCGTGAGAAAGACAGGAAGGGGGAACGTTAACTCTTTCTCAGCAGCATCACTTTTAGTTTCAAATGGCCCTGTGGTGAACCAAGGTAGAGCTGTGTACATCCTCATGCATGTGTACGTGTGCAGACATGAAGATCTGTATGACATGGTGCACGTATTAGCTTGGTGCTTCAGTGTGGGAACATGGTTTGTGGTCATGTCTGCTTGTAAAGTCAGATCTCTGACCAGGTATAAGTAGATCTTGGCAGACCGTCTGCAAAAACACGTCCTAAAgctgaacaatacaaaacaacctcTATCGTGCTCCAGTCTGGTAAGTCCAGCTATCAGATACCGTAAACCTCATTGTAATCTCTGCATGATACGGCTTCATTAAATGGTGGCATTGCAGTGACTCCTATCCATTTTTAAATAGTTGATCATATCAAAGCTATGTTGTATCATGTTTTTGTATTGTTATGCTGATTGGTATGGTCTCCTATACATGTTGTTTTACTACAGGTGCTGTTGAAGGCATGGAGAGAGACAACATCCTAACCTTTTCTGTGCTGTGTGTCTTCTCTGCTTGGACTCCGGGTGTGGATACAAAGACGGTCAGTCTCCCTCTGCATGGTCTAAAACCCAAAATCCCTTTAGACATGGCTCCAGACTCTGTTGATGACTCCTACAAGGGCTGTGAGGAGAAGATGCTCAGGAAGGTGCATGACTATTACCTGAAAACGGAGAGACTAAAAAACAAAGATTTCAACCAGGCTTGGACCGATGCTGAGGCCCGTTACAAACCCAAACCGAAAAGAGCACTGTCTAAACTCTATTCCCTGGCAATCCAGGTGTATGTGACTGAATACTCCCAAATGTTCAAGTCATTTAACGAGGCCACTCGTACCCAAAAGAAGAGCTACAGCACAACATTCCAGTACCACTCCCTGCACTTCCTTCTGACCCTGGCTTTACGAATCCTGAACAAGAAAAATAAGCGTTTTCAAACCTTCCGAGGAACCAACGTGTCTTTCCACGGAGTCCGAAATACTGAAATGCGATTCGGACAGTTCACCTCGAGCTCTTTAGACAAGAAAATCGCTGGTGAACGCTTTGGAAGTCGCTCCTGTTTTGAGATCACCACTTACCTTGGTGCCCCACTGGGGGAGTACGCATCTCAGATGGCTCATGAGAAGGAGGTGCTGATTCCTCCCTACGAGGTGTTCAGAATTACAGAGGTGCTGAAGAGAAAAGACAAGAAAGACCTCTGGTGTGACGTCGTCTACAAACTGCAGAGTACTAAGAAAGGAAAGAGTGACCTGAAATGCCAGATGGTTGGACCACTCCAAGGAGAGTAAAATCAAAACAGCAACACAGCTGTTCCGCTTTCAGTTAAATATGAAATGCAGTTTTTAGTGCAACACCTGGCTTCCCCATCCACCGTCGCTCCCTCCCACAAATACAGGAAATACAGAAAACATTAGTGGAGCTTTTCCTACTTTCAGATTGTCAGATCTGTCCTGTTGTAAATGTTTCCCACATTGTTTGCTTAGATTGTTAACCTTTCTTCTGCCAGTGAATTGGCATTTGTTGTCATGTGCACTGCAGCTTTTGCTAAAAACCTATAATGAAAAGCATTCAGCAATATTACATCTCCTGTCCTATTTATCCACTACCTACACATCCATTATAAAGAGATTAATTTCATCTCACTTGAAGAAAATGTGTTTGTTCTCAGGTTATAATTACAATGGGCTACAAAGATACTCCGATTTAAATAAAGATATAGCCAAAGTTAACCTGAAGCTTCAAT
>TU1818606
acaacctcTATCGTGCTCCAGTCTGGTGCTGTTGAAGGCATGGAGAGAGACAACATCCTAACCTTTTCTGTGCTGTGTGTCTTCTCTGCTTGGACTCCGGGTGTGGATACAAAGACGGTCAGTCTCCCTCTGCATGGTCTAAAACCCAAAATCCCTTTAGACATGGCTCCAGACTCTGTTGATGACTCCTACAAGGGCTGTGAGGAGAAGATGCTCAGGAAGGTGCATGACTATTACCTGAAAACGGAGAGACTAAAAAACAAAGATTTCAACCAGGCTTGGACCGATGCTGAGGCCCGTTACAAACCCAAACCGAAAAGAGCACTGTCTAAACTCTATTCCCTGGCAATCCAGGTGTATGTGACTGAATACTC

Function

NR:

description
ecto-ADP-ribosyltransferase 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954183.1 False 2488 mRNA 0.43 2 9422781 9425478
TU1818606 True 374 TUCP 0.48 3 9423765 9424536

Neighbor

gene id symbol gene type direction distance location
LOC118941451 LOC106610450 coding upstream 9547 9412207 ~ 9413234 (+)
LOC110516167 LOC106610451 coding upstream 13346 9393240 ~ 9409435 (+)
LOC110533188 NA coding upstream 68076 9353721 ~ 9354705 (+)
LOC110534506 LOC106610450 coding upstream 78232 9342853 ~ 9344549 (+)
LOC110534503 LOC106602246 coding upstream 131042 9125724 ~ 9291739 (+)
LOC110533187 LOC106610415 coding downstream 2843 9428321 ~ 9429620 (+)
LOC118941452 LOC106602212 coding downstream 44475 9469953 ~ 9476982 (+)
LOC118941544 LOC106595224 coding downstream 298409 9723887 ~ 9725785 (+)
LOC110534552 LOC106602324 coding downstream 403941 9829419 ~ 9847684 (+)
LOC110498632 LOC106602317 coding downstream 455780 9881258 ~ 9893776 (+)
G1588196 NA non-coding upstream 2959 9418951 ~ 9419822 (+)
G1588173 NA non-coding upstream 82480 9333485 ~ 9340301 (+)
G1588174 NA non-coding upstream 87521 9335016 ~ 9335260 (+)
G1588172 NA non-coding upstream 94933 9327441 ~ 9327848 (+)
G1588156 NA non-coding upstream 149692 9272760 ~ 9273089 (+)
G1588189 NA non-coding downstream 17564 9443042 ~ 9445527 (+)
G1588207 NA non-coding downstream 27373 9452851 ~ 9453191 (+)
G1588212 NA non-coding downstream 31924 9457402 ~ 9458945 (+)
G1588214 NA non-coding downstream 36736 9462214 ~ 9462731 (+)
G1588221 LOC106610435 non-coding downstream 51656 9477134 ~ 9483717 (+)
G1588177 LOC106610450 other upstream 9635 9342859 ~ 9413146 (+)
G1587805 LOC106602251 other upstream 358816 8993454 ~ 9063965 (+)
G1587790 LOC106610525 other upstream 475418 8900986 ~ 8947363 (+)
G1587727 LOC106598223 other upstream 578001 8739544 ~ 8844780 (+)
G1586672 NA other upstream 2366312 7054845 ~ 7056469 (+)
G1588532 LOC106610266 other downstream 385570 9798537 ~ 9814485 (+)
G1588675 NA other downstream 707413 10132891 ~ 10135488 (+)
G1588690 LOC106610250 other downstream 741998 10167476 ~ 10169449 (+)
G1589189 NA other downstream 1137456 10562934 ~ 10568998 (+)

Expression


Co-expression Network