LOC110498432


Basic Information

Item Value
gene id LOC110498432
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 10134147 ~ 10145900 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954235.1
tacaagctagaaccgccactgagTACTGGGCATAATTATGCTGCTTTTCCCCTTCAGTGCAAGTGCATGCATAGTCACATCCATATCCAGTGATGGAAATGGATAGTGTATAGCCACTGCCTCAACACAACACTACAGACAGTGTTGCGGTTCCCACTAGATATATAGTGCCCAATGCTCCAAATGCGTGGAACATAGATGATACCACAGCAGGAAATAACTAGCCTATCATATGTAATTAAATGCTGCTTTCTCTTTGTTTGATGTCTAATGTCCCTGCAATTCTGTGTCCTCCTGTCTGTCATACCATTCTGTGTCCTTCTGTCTGTCATACCATTCTGTGTCCTCCTCTCGTTCATACCATTTTCCCCCCattcttttttctttttctcttttaCAGTCATTGAGCATCCCGAAAACAATGCAGTGTGGACATCCCCTGGGACAGCACGATCtcgcagaaagagagaggtgacacCGCGATTTGTTAGCTCCAATGACAATGTAGCCTATTGCTCGGTGAAGAGTAAAGCAAGTTTGATATGATAACTGTTTGTATAGGAGGAGGACCCAACCAAACAAGCATGAGTCATAGCGCACAGCCACATCTTCGCTAGACCCTCGCAAGAAAATCGATATTACATGCTTGACCCAATTATCATTTAGGCTACCTCCTCTGATCAGACCTGTATCCCGAACCGCTCCGATCGAAGGCGCGGCTTTATGTCACGGAGACCTGCTTGAAATTATTTCATTGATATTCAGCCGGGTGCTTCAGCCGCACCGTGGAAACAAACAGGGGCTAAATAGCGCAGTAATCAACCCCCGAATATGATATGATACGGGGACTACACCGCACCAGGGAATTACACAAATAGACAGGGACAGGATTGTGGACACCTGGTTTGACTTTGGATCCCTACAGTAGAAGTGTCtcagaggactgtctcaatacagGATGGGAACCAACCCAAAAAGGACAGTGACAGTCCAAATGGTCCCTCAACTGGCTGGAGTGGAAGCTCTGGGAAACCAGGAGTCTAACGCCAACTGGGCTAAAGAACCTAACCTGAACCTCACTCAGGGTTGCCCTgcccccaccactaccactacccctGTCCCTACAGAACACACACGGGATAACCTGTGTCTGACAACCCCCAACACAACCTCCAGGATCCAATCAACTGGCCATGGACAACCGGTTGGCGGCAGAGTGGGGTCCAACACCAACACAACTTTCTCGACCAATGGCGACAGAGGGAAATCGCCATCGGAGCATGTGATTGGAATAGAGCAGCAGATGGTATTGACATGCCGAGGAGGTGTGAGTGTAACCGAGGCGACGGCAGAGGGCCGTAGGGACGGCAACGCCAATTTGACAGCGTTAACCCCCACAGCCGCCGCCGAGGAGAAGGAGAAGCATATCTGTAAGGCCAGCCTGTCGTCCGCCATTACATCATCAAAGGTTGACGTGCATACAAATTactgcagagagaaagagcctGGTGGAGCAGGGGCGGGGGAGGGGTGTGCAGCCAAGCCATCGCCAGAGCCCACAGAAGTACAGAGTGCTACAGCCAGAGTTTCTGCAGTAGCTAAAGAGGAGTCACTACTAGAAGGGGACAACAAAAACGCAACCACACCAAATCAACATCCCCCTCAGACCTGTGATCCAAAGCATACCTCGGTCTCTGAAGTGCTGACGTCTCTGACGACTCCCAAACAAGGTAAGGCAGAGGGAGCTGcagtgacttcaaacaaggttgcTCCGCCTCCTTACAAATCAAAAGAGGCTGATAATAGTACTACAACACAGAGTCTCTCACCTTTACCTAGCCCCGCCACCGCCACCAACACCGCCACCGCCACCAACCCTACTCCATCAGAACGTCCTCTACAGGCCTCTAAAGAAAATACGCCCAAGACAAACTCTCAGAACCCTCCTTCCCAAACGGAATACAATAAAACGGCAGCTACATCACAGCCGGAACAGACCAAGGAGACTGCAGTAGCTCCTGTCAATGCTGCCATCACCATCACGCCTCCATTATCAGACAGCAAGGAGAATGTAGGGCTTAGGAATAAGGCCTCAAGTCCGGCACCCCCTGAGAAGAAGGATTTAAAACCTACTCCAGTAGCAAAGACAGAAATCTGCTTAGATAAACACCTGCAGGCGGCATCGTCAGAGTCTTCATCACAGAAGGATTCTCCCTCGTCACCCAACGAGGCCCAACAGAACCAACAGCCGGAGGCCCAACAGGGCCAGAACCAACAGCCTGAGGCCCAACAGGGCCAGAACCAGCAGCCTGCCTACCATGCAGCACAGGTGACAGACGAAGCCGTCCAGACTGCCTCGGTCTCGGAGGAGATGCAACAGAAAGCCCACTGCAAACTATACCGGGAGGCCTCCACCATGACCCGCACCCCCATCGCCACCCCCACCGCCACCCCCACCCATAGCAAGCAGGGCCAAGATGTGGAGGTCCAGGCAGTGGCTAACGTGTGCAGCCGGGCGGTCTCCACCAGCCCCAGCCTGTTTCCTCTGCCCCCGCCCTACAGGTCCACTGACAGAGGTGCTGCCCTGAGGGAGGAAGCAGCAGCTGAGAGCCTGTCTGTGGTCTACCAGGTGCCCCTTCACCAGATTCACATGGGCAGCAGTCCATCCTGCCCCCCGCCACCTAACTACACCGCAGGTCTCAGGTCCGGGTCAGAGCGATTGACCCTGGAGGCGGGGTTATGCTCCAGTCAGAGTGCCGGGGTGGTGCTCCATGCAGAGGAGGCGGTGGCGGCCCTCCATGCAGAGGTCGCCAGGCTGGGGGCCAAGCCTAAAGATCTGGCAGTCGGGGGGGCAGCAGCGCTATGCAACATCCAGCAGAGAGGAGCACTCCCGCCTCTGCAGCCCGTCTACCAGATCAACATTGAGCCGAGCGGCAGCCAAAACGAGCCGGTAGCTAAAGCGAATCATCACCAGCATCGAGGCGAGAAGGCAGTGGCAGACTCCCAATCCAAGCTCAATGCAGCAGAGAAACCAAAGGTGTCTAATGAAGGGCAGACCGTGCCAACGCAGCCTGCCAAGCCTCCCTCTGCTAAAGCTCCATCCCCCTTGTCGCCAACTGCCGCAAGCAAGACCAAATCCTCCGACAATAaggctgctcctcctccttcgcAGTCAACTCCTTCCGTTACCAAGCCCAGCCAGGCCTCAACGACAACCTCCAAAAAAACAGAGGACACTAAACCCAAGACGGCAGTGAAAGCAGCGAAGCAGAGCATTGTTAAGGGGGTTGGGGGCGTTAAGGCTTTGTTGGGCAAGAAGAAGCAGGAGCAGCTGgagccggagaggaaggaaaaggaggaCGAAGACGAGGAGGGGAaacagaaaggagagaagagcGTGCACGATGTGCTGTGGGACGAGCAGGGGATGACCTGGGAGGTGTACGGAGCATCCGTTGACCCCGAGTCCCTTGGCTTTGCCATCCAGAGCCACCTGCAGTGTAAGATCAAAGAACAAGAGAAGAAGGTCGTGACCCAGTCATCACTCAGGAAGTCCATCTCAGTGCCGCCGGTGGTGCCCGACTCGCCCGCCACCGTTGCCGTGGACGACGCCAACAGCAGGAAAAACAAGAGGAGGCAGCAGAACGTTTTCAGGTCCATGCTGAAAAATGTCAGACGGCCCAAGTGCTGCGCGCACCCTCCCCCTACCGCCGTGCTGGAGTGAGAAGGAGAAGCAGCGGGCTGTATGCAGCCCACACCATCAGCTGAGTCCCCTATAAAGCAGGCTGGTTCACCCCTTGTTATGGTTCCTCCGATGCCAAGCCATGTGTGGATATTGGGATCTCTCCCTAACCCTACTGGTCAGATGTTGTGGTATACAATGTTACCTTAGATAGGGTTGATGATTATCAACAGAAGAGGGCAAAACAAAAAGCTAAAATAGGTTCTTGGTATGGACAACTTATTTTTTAGATGAGAGAGATTCTAACAGTATTTAATGAAAAATGGCAATAATAATATCTTAGTGAAACGCATGTGTGTTAGTACTTATGGCAGTCATAACTCATTTTACCACTATGAAGTCCTGGTGTATACAGTACATGCCTCTGATCTTTGGGCGTACATACATATTACTGTCAGTATCATACCTTTTACAGATGTGCAACTAAATATCACTACTTCTCAGTGCAGTGGGTGCATTTTGGTAAATATACAGTATGATAACGTTCCGGGTGTATTGAACAACCTCTATTTATAAGATGaacatattattatttatttagtttgttttttgTTGCAGATTTTATTTTGAATGGGTAACTACTTACTTTGTCTTGATAAAGAAGATGAATAAAACCTCTGCTGTGCTCATTTC
>TU1819455
TACCATTCTGTGTCCTCCTCTCGTTCATACCATTTTCCCCCCattcttttttctttttctcttttaCAGTCATTGAGCATCCCGAAAACAATGCAGTGTGGACATCCCCTGGGACAGCACGATCtcgcagaaagagagaggtgacacCGCGATTTGTTAGCTCCAATGACAATGTAGCCTATTGCTCGGTGAAGAGTAAAGCAAGTTTGATATGATAACTGTTTGTATAGGAGGAGGACCCAACCAAACAAGCATGAGTCATAGCGCACAGCCACATCTTCGCTAGACCCTCGCAAGAAAATCGATATTACATGCTTGACCCAATTATCATTTAGGCTACCTCCTCTGATCAGACCTGTATCCCGAACCGCTCCGATCGAAGGCGCGGCTTTATGTCACGGAGACCTGCTTGAAATTATTTCATTGATATTCAGCCGGGTGCTTCAGCCGCACCGTGGAAACAAACAGGGGCTAAATAGCGCAGTAATCAACCCCCGAATATGATATGATACGGGGACTACACCGCACCAGGGAATTACACAAATAGACAGGGACAGGATTGTGGACACCTGGTTTGACTTTGGATCCCTACAGTAGAAGTGTCtcagaggactgtctcaatacagGATGGGAACCAACCCAAAAAGGACAGTGACAGTCCAAATGGTCCCTCAACTGGCTGGAGTGGAAGCTCTGGGAAACCAGGAGTCTAACGCCAACTGGGCTAAAGAACCTAACCTGAACCTCACTCAGGGTTGCCCTgcccccaccactaccactacccctGTCCCTACAGAACACACACGGGATAACCTGTGTCTGACAACCCCCAACACAACCTCCAGGATCCAATCAACTGGCCATGGACAACCGGTTGGCGGCAGAGTGGGGTCCAACACCAACACAACTTTCTCGACCAATGGCGACAGAGGGAAATCGCCATCGGAGCATGTGATTGGAATAGAGCAGCAGATGGTATTGACATGCCGAGGAGGTGTGAGTGTAACCGAGGCGACGGCAGAGGGCCGTAGGGACGGCAACGCCAATTTGACAGCGTTAACCCCCACAGCCGCCGCCGAGGAGAAGGAGAAGCATATCTGTAAGGCCAGCCTGTCGTCCGCCATTACATCATCAAAGGTTGACGTGCATACAAATTactgcagagagaaagagcctGGTGGAGCAGGGGCGGGGGAGGGGTGTGCAGCCAAGCCATCGCCAGAGCCCACAGAAGTACAGAGTGCTACAGCCAGAGTTTCTGCAGTAGCTAAAGAGGAGTCACTACTAGAAGGGGACAACAAAAACGCAACCACACCAAATCAACATCCCCC

Function

NR:

description
G protein-regulated inducer of neurite outgrowth 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954235.1 False 4375 mRNA 0.52 2 10134147 10145900
TU1819455 True 1331 TUCP 0.51 2 10136860 10145569

Neighbor

gene id symbol gene type direction distance location
LOC110498434 LOC106610245 coding downstream 9883 10077141 ~ 10124264 (-)
LOC110498641 LOC106610246 coding downstream 57236 9996772 ~ 10076911 (-)
trnaa-ugc-142 NA coding downstream 152818 9981256 ~ 9981329 (-)
LOC110497358 LOC106602316 coding downstream 253183 9870434 ~ 9880964 (-)
LOC110534550 abcg2 coding downstream 270048 9848093 ~ 9864099 (-)
LOC110498444 LOC106610252 coding upstream 12295 10158195 ~ 10163470 (-)
LOC110498426 tbc1d9 coding upstream 21569 10167469 ~ 10199999 (-)
LOC110498448 LOC106610232 coding upstream 161520 10307420 ~ 10308850 (-)
LOC110498640 LOC106610235 coding upstream 163058 10308958 ~ 10664917 (-)
LOC110497361 LOC100380732 coding upstream 519161 10665061 ~ 10734695 (-)
G1588928 NA non-coding downstream 1155 10132759 ~ 10132992 (-)
G1588914 NA non-coding downstream 1528 10130666 ~ 10132619 (-)
G1588922 NA non-coding downstream 13764 10119062 ~ 10120383 (-)
G1588878 NA non-coding downstream 106220 10027681 ~ 10027927 (-)
G1588935 NA non-coding upstream 3546 10149446 ~ 10149922 (-)
G1588938 NA non-coding upstream 17652 10163552 ~ 10163873 (-)
G1588939 LOC106573797 non-coding upstream 18775 10164675 ~ 10165290 (-)
G1588940 NA non-coding upstream 19945 10165845 ~ 10166353 (-)
G1588949 NA non-coding upstream 45881 10191781 ~ 10192273 (-)
LOC118941443 NA other downstream 1165843 8965525 ~ 8971363 (-)
G1588003 LOC106610497 other downstream 1180471 8902855 ~ 8953676 (-)
G1587567 NA other downstream 1799269 8243558 ~ 8334878 (-)
G1587522 LOC106598223 other downstream 1909114 8146257 ~ 8225033 (-)
LOC110500908 LOC106592107 other downstream 2240868 7886301 ~ 7908783 (-)
LOC110497368 LOC106610221 other upstream 978488 11115879 ~ 11212126 (-)
G1590098 LOC106577701 other upstream 1124616 11270516 ~ 11270818 (-)
G1590583 NA other upstream 1495507 11641407 ~ 11641866 (-)
LOC110497375 LOC106610178 other upstream 1931818 11933020 ~ 12261321 (-)
G1591322 NA other upstream 2105891 12251791 ~ 12252528 (-)

Expression


Co-expression Network