LOC110497363 (LOC106610230)


Basic Information

Item Value
gene id LOC110497363
gene name LOC106610230
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 10832619 ~ 10864983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954276.1
GGGATGCACTAGACTGCACTGCATTTCCTCACTCTGTTAGTGACACAGTCTACAGCAGGCTACTAGAGTAACAAGGAAAGAGAACTATACACAAGGGTTACTCAAAATGGACAAAATGCAGTTGACTTTTCCCTGTCTGACTGTCCTTTTGGGTCTCGTCCTGGCTTCTACCACCACAGCCCAGACACAGCCAGTCAATCCCACTGTAACCCAGCCCACCTCAGCCTCCAAcccagccaacaacacagccactCTAGGACACACCACGGTTGTAGACAACAATCATTTAACATTATCCGCCATAAACCCAAACCTTACTGATCCTATTTTTGATAACGTCCCTATAACCAATTCCACCGGGTGGCCTAACCACACGGTAACCACACCACTGAAGACCAGTTCAGATGCCTCTCCAGGACCGACATACTGGCCCTCACCAATGGACGTCTCTACATCAAAGCCCCCAGCAGAGGCCAGCAGCACAACTGCTAGCACTTCTGTTACTAGCACCACCAAGAAAAGAGGTTTGACGGGAACTGCTCAACCAAAACCCTCTGCGAGAAAATCGCCCCACATTGGATTGATCATCTTTATTGCGATCATCATCACTGCCTGTGTGCTTGGAGCAACATGCTTCTTCACTAAGAAGACATCAAGGAGGTACTCCGTAGATCTCCGAGGCAGGCATGAGGATCTGCCTCTGAGTACTGCGGATCCCGACGCCGTGTTTGACAACTCCTCAACACAGAAGGGGATGGACACCTTTACCGCCGTGGATCTCAACAGCACCGAGGTCCTGGTTAAGGgaagtgagggagaaagagCAGATAGTGAGAAAATCTCTGACTACCCACCGCCTGCCAGCCCTGTGGACAAACCTGATGATGGGGCCCCTGGAGATGTGGCCCCTGAGGCCCCAGCGGGGGAGACTGATGACGAGAACACTGTCTCCAATAAGACCTCAGTGGAGTCAGTGGAGGCCAACAAgagtaacaacaacaacaccagcaTCACCGCCAGGATCACTTCAACAACTCCAAGAGGACGGGCCATGACCAGCAGCTTCTCTGAGGTTCCTCTGGACAACCCGGCCTAAAAGAGATCCTCCTTTATCTGCAGCCCCTTCACAACCACGGCTGAAGATAAAACGTGACGTCAAAGGTCAAGTCATCGGAAACGCCTGAAAACAAAGTATTTCTTTCAATTCATATTACATAGGCTAGTTGATTAAGTTGATGTTTTCTCTGTCTATAAACAGTTTAACTATTGTTGTCTTTTATATCTCAGGAATGGAAATGCTAAGTTAAATTTCACTTTTATTATTTACTTTTATTATACTGTATTTTTGTTATCGTAGCCTTCGGAGTTAATACGCCTAATTTTGATTCATTCATTTAAATTCTAAACATATGCCCTGCGTCACAGGGTCCAcgtctcttgtgtgtgtgtatatagtatagataGGAATGTATGTCTTTAGGGAAGAGTAGCAGTGTCAGAATGTGTTCATGTTGTTATTCGGATTTACTTAAgatttataccatggcattgttaaatactgatttctgattggcttgaagggcattctagaaagCTGCCTTATTTATTTACATAAACTCATATGAAGTCATGAAATATGAGGTCATGTATGAACTTAAAATtgttaacatctctgtttccAAGATACATTTTTGGGGAGATCAGTTTCAAATCTTTCTGCAGATTTTTCACATTCCCCCTCAAGCTATGTTGTCAATTCATTTGTCTTTTTGAAATAACGGCAATACTTCCATCGTCATGTTCTGTACATTTTGTTTGCATGGGTTTGATTACATCCTTTTTGGCTGTTTTTGATGTAAGTAGCTAGATAAATGTAGTGAATGTGTCACAATATGTCTGTTATTGGGCGATCTAAATCCTACTCAGCGTGAAGCGTGTGTTTTATTCATGTTCTTCAACTTCCCCTCGTGTCATCTGGGCCTCGTTCAGGAGCCAAACGTTGTGGAAACCCTTCAGATAGAAATGTCCTGATTAGAGCTGACGTGATTCCTGATTCCGCATCTCACAGAGGCATGTCTATTCTGCAAAATATATTTCTGAACGTTTCACAATGTTGAGCCCTGCTAAATGCAGCCCTGGTCCCCAGCATACAGTGAACTGGACCCTGCTATTGCGAGGCCACCTGTTTAATACCCTCATGAATTAGAAACCAGGCTATCAAGCCAATCCACTGCATCTCCATCCAAGACGACATCCTAAAAGGCTTATGGGTGGATTGCTCTGGATGATGCTAATAGCAGCAGATATGCTATAATTTACACGTAGTGAAACACAACAACtaaaaggagaggaaagggaggccAGGGCTAGAGACAGTCCAAGCCAAGAAGATAGCAGTGTTGGTTCGTGATCCAGGGGAAATGAAAGTGATACTGTGATATAGCCTAGCTATGACGGATTGGAAAGAAACAGCTGGGAGAGGTGGGATACAGGAGAGAACTCCAAACTGTTTCCTTTACAGGATAGTTTCTCCTCTTTCTACACACTCATTCACAACCATCCCAATGTAGTGCGTGAAATTCTACTTCCTTTTTTCATGCATCAAGTCGGAAATCTTGacacaaataaaatgtaaaaaacgaAGAAGTCCAGAAGACGTTTCCATAAATAATGCTCTGTCTAGAACACCTGTTCCTCTTGTTTGTACATTTGAATAAATCTATCAAAAACA

Function

NR:

description
PREDICTED: mucin-5AC-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954276.1 True 2731 mRNA 0.44 10 10832619 10864983
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110498645 frem3 coding downstream 21170 10759730 ~ 10811449 (-)
LOC110497360 LOC106602359 coding downstream 83695 10739032 ~ 10748924 (-)
LOC110497361 LOC100380732 coding downstream 97924 10665061 ~ 10734695 (-)
LOC110498640 LOC106610235 coding downstream 167702 10308958 ~ 10664917 (-)
LOC110498448 LOC106610232 coding downstream 523769 10307420 ~ 10308850 (-)
LOC110497364 LOC106610217 coding upstream 14804 10879787 ~ 10897278 (-)
LOC110498648 hhip coding upstream 52446 10915252 ~ 10964718 (-)
LOC110497368 LOC106610221 coding upstream 250896 11115879 ~ 11212126 (-)
LOC118941455 NA coding upstream 667281 11532264 ~ 11542073 (-)
LOC110497372 prmt9 coding upstream 683422 11548405 ~ 11562995 (-)
G1589642 NA non-coding downstream 11915 10820450 ~ 10820704 (-)
G1589640 NA non-coding downstream 12369 10819659 ~ 10820250 (-)
G1589639 NA non-coding downstream 13153 10819231 ~ 10819466 (-)
G1589599 NA non-coding downstream 96486 10735912 ~ 10736133 (-)
G1589779 NA non-coding upstream 37056 10902039 ~ 10981391 (-)
G1589797 NA non-coding upstream 72733 10937716 ~ 10938850 (-)
G1589820 NA non-coding upstream 143495 11008478 ~ 11008690 (-)
G1589845 NA non-coding upstream 174962 11039945 ~ 11040286 (-)
LOC110498432 NA other downstream 687050 10134147 ~ 10145900 (-)
LOC118941443 NA other downstream 1864315 8965525 ~ 8971363 (-)
G1588003 LOC106610497 other downstream 1878943 8902855 ~ 8953676 (-)
G1587567 NA other downstream 2497741 8243558 ~ 8334878 (-)
G1587522 LOC106598223 other downstream 2607586 8146257 ~ 8225033 (-)
G1590098 LOC106577701 other upstream 405533 11270516 ~ 11270818 (-)
G1590583 NA other upstream 776424 11641407 ~ 11641866 (-)
LOC110497375 LOC106610178 other upstream 1212735 11933020 ~ 12261321 (-)
G1591322 NA other upstream 1386808 12251791 ~ 12252528 (-)

Expression

LOC110497363(LOC106610230) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC110497363(LOC106610230) Expression in each Bioproject

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LOC110497363(LOC106610230) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network