Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110497364 |
| gene name | LOC106610217 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 10879787 ~ 10897278 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nephronectin-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021573432.2 | False | 5045 | mRNA | 0.44 | 7 | 10879787 | 10896308 |
| XM_036954277.1 | True | 4943 | mRNA | 0.44 | 7 | 10879787 | 10897278 |
10,876,000
10,878,000
10,880,000
10,882,000
10,884,000
10,886,000
10,888,000
10,890,000
10,892,000
10,894,000
10,896,000
10,898,000
10,900,000
10,902,000
10,904,000
10,906,000
10,908,000
10,910,000
10,912,000
10,914,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497363 | LOC106610230 | coding | downstream | 14804 | 10832619 ~ 10864983 (-) |
| LOC110498645 | frem3 | coding | downstream | 68338 | 10759730 ~ 10811449 (-) |
| LOC110497360 | LOC106602359 | coding | downstream | 130863 | 10739032 ~ 10748924 (-) |
| LOC110497361 | LOC100380732 | coding | downstream | 145092 | 10665061 ~ 10734695 (-) |
| LOC110498640 | LOC106610235 | coding | downstream | 214870 | 10308958 ~ 10664917 (-) |
| LOC110498648 | hhip | coding | upstream | 20151 | 10915252 ~ 10964718 (-) |
| LOC110497368 | LOC106610221 | coding | upstream | 218601 | 11115879 ~ 11212126 (-) |
| LOC118941455 | NA | coding | upstream | 634986 | 11532264 ~ 11542073 (-) |
| LOC110497372 | prmt9 | coding | upstream | 651127 | 11548405 ~ 11562995 (-) |
| mra | mra | coding | upstream | 747279 | 11644557 ~ 11742079 (-) |
| G1589642 | NA | non-coding | downstream | 59083 | 10820450 ~ 10820704 (-) |
| G1589640 | NA | non-coding | downstream | 59537 | 10819659 ~ 10820250 (-) |
| G1589639 | NA | non-coding | downstream | 60321 | 10819231 ~ 10819466 (-) |
| G1589599 | NA | non-coding | downstream | 143654 | 10735912 ~ 10736133 (-) |
| G1589779 | NA | non-coding | upstream | 4761 | 10902039 ~ 10981391 (-) |
| G1589797 | NA | non-coding | upstream | 40438 | 10937716 ~ 10938850 (-) |
| G1589820 | NA | non-coding | upstream | 111200 | 11008478 ~ 11008690 (-) |
| G1589845 | NA | non-coding | upstream | 142667 | 11039945 ~ 11040286 (-) |
| LOC110498432 | NA | other | downstream | 734218 | 10134147 ~ 10145900 (-) |
| LOC118941443 | NA | other | downstream | 1911483 | 8965525 ~ 8971363 (-) |
| G1588003 | LOC106610497 | other | downstream | 1926111 | 8902855 ~ 8953676 (-) |
| G1587567 | NA | other | downstream | 2544909 | 8243558 ~ 8334878 (-) |
| G1587522 | LOC106598223 | other | downstream | 2654754 | 8146257 ~ 8225033 (-) |
| G1590098 | LOC106577701 | other | upstream | 373238 | 11270516 ~ 11270818 (-) |
| G1590583 | NA | other | upstream | 744129 | 11641407 ~ 11641866 (-) |
| LOC110497375 | LOC106610178 | other | upstream | 1180440 | 11933020 ~ 12261321 (-) |
| G1591322 | NA | other | upstream | 1354513 | 12251791 ~ 12252528 (-) |
