Item | Value |
---|---|
gene id | fbxw7 |
gene name | fbxw7 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 12526763 ~ 12624575 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
fbxw7 | Acts upstream of or within angiogenesis; negative regulation of myelination; and regulation of signal transduction. Is expressed in glioblast (sensu Vertebrata); neural tube; neuroblast (sensu Vertebrata); spinal cord; and trunk. Orthologous to human FBXW7 (F-box and WD repeat domain containing 7). |
description |
---|
PREDICTED: F-box/WD repeat-containing protein 7 isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036954313.1 | False | 4404 | mRNA | 0.49 | 11 | 12526763 | 12566942 |
XM_036954314.1 | False | 4401 | mRNA | 0.49 | 11 | 12526763 | 12566942 |
XM_036954312.1 | False | 4121 | mRNA | 0.49 | 11 | 12526763 | 12616019 |
XM_036954309.1 | False | 4504 | mRNA | 0.50 | 11 | 12526763 | 12624575 |
XM_036954310.1 | False | 4477 | mRNA | 0.50 | 11 | 12526763 | 12624575 |
XM_036954311.1 | False | 4474 | mRNA | 0.50 | 11 | 12526763 | 12624575 |
TU1822590 | False | 1093 | lncRNA | 0.37 | 2 | 12526843 | 12527955 |
TU1822591 | True | 1089 | lncRNA | 0.37 | 2 | 12526843 | 12527955 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110497381 | gatb | coding | downstream | 162769 | 12344938 ~ 12363994 (-) |
sh3d19 | LOC106610182 | coding | downstream | 225637 | 12277543 ~ 12301126 (-) |
LOC110497375 | LOC106610178 | coding | downstream | 265442 | 11933020 ~ 12261321 (-) |
mra | mra | coding | downstream | 784684 | 11644557 ~ 11742079 (-) |
LOC110497372 | prmt9 | coding | downstream | 963768 | 11548405 ~ 11562995 (-) |
LOC118941457 | NA | coding | upstream | 20745 | 12645320 ~ 12737217 (-) |
tmem154 | LOC106602392 | coding | upstream | 117497 | 12742072 ~ 12767164 (-) |
LOC110497386 | LOC106602389 | coding | upstream | 594492 | 13219067 ~ 13221750 (-) |
LOC110497387 | LOC106602387 | coding | upstream | 601594 | 13226169 ~ 13239221 (-) |
LOC110497388 | LOC106602386 | coding | upstream | 643693 | 13268268 ~ 13270309 (-) |
G1591711 | NA | non-coding | downstream | 4179 | 12521763 ~ 12522584 (-) |
G1591707 | NA | non-coding | downstream | 12159 | 12514390 ~ 12514604 (-) |
G1591701 | NA | non-coding | downstream | 20026 | 12506461 ~ 12506737 (-) |
G1591695 | NA | non-coding | downstream | 26455 | 12500105 ~ 12500308 (-) |
G1591690 | NA | non-coding | downstream | 34588 | 12491968 ~ 12492175 (-) |
G1591763 | NA | non-coding | upstream | 53355 | 12677930 ~ 12680593 (-) |
G1591768 | NA | non-coding | upstream | 73939 | 12698514 ~ 12698801 (-) |
G1591834 | NA | non-coding | upstream | 160394 | 12784969 ~ 12785181 (-) |
G1591847 | NA | non-coding | upstream | 167596 | 12792171 ~ 12792483 (-) |
G1591848 | NA | non-coding | upstream | 168618 | 12793193 ~ 12793472 (-) |
G1591322 | NA | other | downstream | 274235 | 12251791 ~ 12252528 (-) |
G1590583 | NA | other | downstream | 884897 | 11641407 ~ 11641866 (-) |
G1590098 | LOC106577701 | other | downstream | 1255945 | 11270516 ~ 11270818 (-) |
LOC110497368 | LOC106610221 | other | downstream | 1348646 | 11115879 ~ 11212126 (-) |
G1593032 | spcs3 | other | upstream | 1200984 | 13825559 ~ 13829469 (-) |
G1595424 | NA | other | upstream | 1858850 | 14483425 ~ 14483790 (-) |
LOC110498659 | LOC106610072 | other | upstream | 2635317 | 15246799 ~ 15287139 (-) |
G1596136 | LOC106610103 | other | upstream | 3175678 | 15800253 ~ 15901185 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | G4210 | NA | non-coding | CI01000000 | null | 6793427 ~ 6793655 (+) |
tiger barb (Puntius tetrazona) | G3245 | fbxw7,LOC107757568,LOC107745860 | non-coding | NC_056699.1 | CM032068.1 | 14268912 ~ 14273785 (+) |