Item | Value |
---|---|
gene id | LOC110497429 |
gene name | LOC106609892 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 17369814 ~ 17378794 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
vacuolar protein sorting-associated protein 37C-like |
id | description |
---|---|
K12185 | VPS37; ESCRT-I complex subunit VPS37 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036954354.1 | False | 3695 | mRNA | 0.47 | 5 | 17369814 | 17378585 |
XM_036954353.1 | False | 3723 | mRNA | 0.47 | 5 | 17369814 | 17378590 |
XM_036954355.1 | True | 3614 | mRNA | 0.47 | 5 | 17369814 | 17378794 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110498555 | LOC106609917 | coding | downstream | 3509 | 17359938 ~ 17366305 (-) |
LOC110497427 | LOC106602593 | coding | downstream | 43406 | 17309414 ~ 17326408 (-) |
LOC110497426 | LOC106576595 | coding | downstream | 64790 | 17289080 ~ 17305024 (-) |
clta | LOC106609887 | coding | downstream | 115050 | 17244420 ~ 17254764 (-) |
LOC110497421 | cplx1 | coding | downstream | 182675 | 17175808 ~ 17187139 (-) |
LOC110497430 | LOC106602587 | coding | upstream | 5181 | 17383975 ~ 17398168 (-) |
LOC110497432 | LOC106609894 | coding | upstream | 42019 | 17416966 ~ 17436211 (-) |
LOC110497438 | kdm2a | coding | upstream | 96409 | 17475203 ~ 17494526 (-) |
LOC110497437 | LOC106602583 | coding | upstream | 115882 | 17494676 ~ 17506413 (-) |
LOC118941460 | NA | coding | upstream | 127663 | 17506457 ~ 17508463 (-) |
G1596907 | NA | non-coding | downstream | 1802 | 17367745 ~ 17368012 (-) |
G1596903 | NA | non-coding | downstream | 15320 | 17354290 ~ 17354494 (-) |
G1596900 | NA | non-coding | downstream | 41048 | 17328561 ~ 17328766 (-) |
G1596878 | NA | non-coding | downstream | 83676 | 17285897 ~ 17286138 (-) |
G1596877 | NA | non-coding | downstream | 86066 | 17283442 ~ 17283748 (-) |
G1596913 | NA | non-coding | upstream | 308 | 17379102 ~ 17379366 (-) |
G1596939 | NA | non-coding | upstream | 58465 | 17437259 ~ 17437495 (-) |
G1596964 | NA | non-coding | upstream | 94370 | 17473164 ~ 17473766 (-) |
G1596879 | NA | other | downstream | 81797 | 17286530 ~ 17288017 (-) |
G1596856 | LOC106613263 | other | downstream | 126791 | 17242606 ~ 17243023 (-) |
LOC110498506 | LOC106609878 | other | downstream | 438364 | 16924529 ~ 16931521 (-) |
LOC110498466 | LOC106606466 | other | downstream | 781647 | 16523595 ~ 16588239 (-) |
LOC110498461 | LOC106610045 | other | downstream | 928842 | 15669157 ~ 16441067 (-) |
G1596940 | NA | other | upstream | 58870 | 17437664 ~ 17437878 (-) |
G1596970 | LOC106609899 | other | upstream | 115875 | 17494669 ~ 17530745 (-) |
LOC110497446 | NA | other | upstream | 237168 | 17615897 ~ 17623476 (-) |
G1598418 | NA | other | upstream | 1384921 | 18763715 ~ 18764422 (-) |
G1599097 | LOC106609944 | other | upstream | 1830498 | 19209292 ~ 19209964 (-) |