Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110497430 |
| gene name | LOC106602587 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 17383975 ~ 17398168 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110497430 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021573533.2 | False | 925 | mRNA | 0.45 | 6 | 17383975 | 17398164 |
| XM_021573532.2 | True | 1070 | mRNA | 0.45 | 7 | 17383975 | 17398168 |
17,374,000
17,376,000
17,378,000
17,380,000
17,382,000
17,384,000
17,386,000
17,388,000
17,390,000
17,392,000
17,394,000
17,396,000
17,398,000
17,400,000
17,402,000
17,404,000
17,406,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497429 | LOC106609892 | coding | downstream | 5181 | 17369814 ~ 17378794 (-) |
| LOC110498555 | LOC106609917 | coding | downstream | 17670 | 17359938 ~ 17366305 (-) |
| LOC110497427 | LOC106602593 | coding | downstream | 57567 | 17309414 ~ 17326408 (-) |
| LOC110497426 | LOC106576595 | coding | downstream | 78951 | 17289080 ~ 17305024 (-) |
| clta | LOC106609887 | coding | downstream | 129211 | 17244420 ~ 17254764 (-) |
| LOC110497432 | LOC106609894 | coding | upstream | 22645 | 17416966 ~ 17436211 (-) |
| LOC110497438 | kdm2a | coding | upstream | 77035 | 17475203 ~ 17494526 (-) |
| LOC110497437 | LOC106602583 | coding | upstream | 96508 | 17494676 ~ 17506413 (-) |
| LOC118941460 | NA | coding | upstream | 108289 | 17506457 ~ 17508463 (-) |
| LOC110497439 | LOC105022884 | coding | upstream | 112045 | 17510213 ~ 17518355 (-) |
| G1596913 | NA | non-coding | downstream | 4609 | 17379102 ~ 17379366 (-) |
| G1596907 | NA | non-coding | downstream | 15963 | 17367745 ~ 17368012 (-) |
| G1596903 | NA | non-coding | downstream | 29481 | 17354290 ~ 17354494 (-) |
| G1596900 | NA | non-coding | downstream | 55209 | 17328561 ~ 17328766 (-) |
| G1596878 | NA | non-coding | downstream | 97837 | 17285897 ~ 17286138 (-) |
| G1596939 | NA | non-coding | upstream | 39091 | 17437259 ~ 17437495 (-) |
| G1596964 | NA | non-coding | upstream | 74996 | 17473164 ~ 17473766 (-) |
| G1596970 | LOC106609899 | non-coding | upstream | 123053 | 17494669 ~ 17530745 (-) |
| G1596879 | NA | other | downstream | 95958 | 17286530 ~ 17288017 (-) |
| G1596856 | LOC106613263 | other | downstream | 140952 | 17242606 ~ 17243023 (-) |
| LOC110498506 | LOC106609878 | other | downstream | 452525 | 16924529 ~ 16931521 (-) |
| LOC110498466 | LOC106606466 | other | downstream | 795808 | 16523595 ~ 16588239 (-) |
| LOC110498461 | LOC106610045 | other | downstream | 943003 | 15669157 ~ 16441067 (-) |
| G1596940 | NA | other | upstream | 39496 | 17437664 ~ 17437878 (-) |
| LOC110497446 | NA | other | upstream | 217794 | 17615897 ~ 17623476 (-) |
| G1598418 | NA | other | upstream | 1365547 | 18763715 ~ 18764422 (-) |
| G1599097 | LOC106609944 | other | upstream | 1811124 | 19209292 ~ 19209964 (-) |
