Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110497443 |
| gene name | LOC106609902 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 17547793 ~ 17554950 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021573547.2 | False | 1818 | mRNA | 0.48 | 7 | 17547793 | 17554950 |
| TU1828676 | True | 1505 | lncRNA | 0.47 | 6 | 17547880 | 17554897 |
17,546,000
17,547,000
17,548,000
17,549,000
17,550,000
17,551,000
17,552,000
17,553,000
17,554,000
17,555,000
17,556,000
17,557,000
17,558,000
17,559,000
17,560,000
17,561,000
17,562,000
17,563,000
17,564,000
17,565,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497442 | LOC106609865 | coding | downstream | 10632 | 17533072 ~ 17537161 (-) |
| LOC110497441 | NA | coding | downstream | 16128 | 17522938 ~ 17531665 (-) |
| LOC110497439 | LOC105022884 | coding | downstream | 29438 | 17510213 ~ 17518355 (-) |
| LOC118941460 | NA | coding | downstream | 39330 | 17506457 ~ 17508463 (-) |
| LOC110497437 | LOC106602583 | coding | downstream | 41380 | 17494676 ~ 17506413 (-) |
| LOC110498667 | LOC106609920 | coding | upstream | 24491 | 17579441 ~ 17600354 (-) |
| LOC110497445 | LOC106602577 | coding | upstream | 50122 | 17605072 ~ 17613102 (-) |
| LOC110497446 | NA | coding | upstream | 60947 | 17615897 ~ 17623476 (-) |
| LOC118941549 | NA | coding | upstream | 141406 | 17696356 ~ 17696542 (-) |
| zdhhc5a | LOC106609866 | coding | upstream | 195274 | 17750224 ~ 17791565 (-) |
| G1596992 | NA | non-coding | downstream | 3497 | 17544054 ~ 17544296 (-) |
| G1596990 | NA | non-coding | downstream | 9274 | 17537994 ~ 17538519 (-) |
| G1596970 | LOC106609899 | non-coding | downstream | 17048 | 17494669 ~ 17530745 (-) |
| LOC110497438 | kdm2a | non-coding | downstream | 69770 | 17475203 ~ 17494526 (-) |
| G1596964 | NA | non-coding | downstream | 74027 | 17473164 ~ 17473766 (-) |
| G1597068 | NA | non-coding | upstream | 3232 | 17558182 ~ 17558424 (-) |
| G1597077 | NA | non-coding | upstream | 17421 | 17572371 ~ 17572669 (-) |
| G1597080 | NA | non-coding | upstream | 17839 | 17572789 ~ 17573316 (-) |
| G1597137 | NA | non-coding | upstream | 131600 | 17686550 ~ 17686840 (-) |
| G1596940 | NA | other | downstream | 109915 | 17437664 ~ 17437878 (-) |
| G1596879 | NA | other | downstream | 259776 | 17286530 ~ 17288017 (-) |
| G1596856 | LOC106613263 | other | downstream | 304770 | 17242606 ~ 17243023 (-) |
| LOC110498506 | LOC106609878 | other | downstream | 616343 | 16924529 ~ 16931521 (-) |
| G1598418 | NA | other | upstream | 1208765 | 18763715 ~ 18764422 (-) |
| G1599097 | LOC106609944 | other | upstream | 1654342 | 19209292 ~ 19209964 (-) |
| G1599197 | NA | other | upstream | 1817359 | 19372309 ~ 19381751 (-) |
| G1599717 | NA | other | upstream | 2000647 | 19555597 ~ 19557357 (-) |
