si:dkey-9i23.6


Basic Information

Item Value
gene id si:dkey-9i23.6
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 17565497 ~ 17573330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573549.2
GGAGAGAACTGGTTTTGGCAGTTTCGATGAAGAAAttattacacactcacacacacacacatgcacgagcACACAGAGCCAGAGGGAAACGTCAGGAGGGAAGAGTGAGGCCGGACATGTTAGAGTTGTGTTTGTTAGGAACACAcgtgggaaaaagagagagagcgagggactgAATGAAAGCAGCTGAGTTTAAAGGAAAGCTTCTCATGAAAAGAgggctggaggagaagaggatgaagGGAAGAAAACACAGAGGAAGAGAATAGAACAGCGatgtctGAGGCGGACAGTCACTCTGGAAATATGTCTCTGATCCAGTCCATGCTGCGCAGACTGAGCACTGCAGAAGACACGGATCAACCTCCTAACATACACTCGAACACACACcgtaacacacaccaacacctcaGAACCTCAGTGGAAACAGACAGGGGATTCTATGTGACCCCTCAGGACCACAATAATGCAGAGCTCAAATTCAAAGGAAAGCTTGCTGAAGTGattgaggatgatgatgatgatgattgtgttGATGATGACAAGGATCCACAATTGAAAGTTCCGACTGAAAGGGACAACGATCCGGAATCATCAGACAGAGAttcagaaagagaagaggggaatTCCGGTATTCCATTTTTGGATGCAGGATTGGAAAACCTGGgcaacgaggaggaagaggaaaacaGCGAAACCCCCTCTGTGATTCCCAGATGGGAGGGAAGGCAGTTTCTACCCTGTCCCCCTGGCCTGGATGCCAGACCCCCGCTTCCCCCCGTTCCCCCCAAGAGGAGGGCTAAACCACCGCTACACCCTACAGGGCCACCGCCCCCTCCACCAGCCCTCGACCCTAGCCGGAGTGCTCCTGTGTGGGGGGGAGTGGTAGGCGAGAGCCCAGGCTGTGAGCTGAGGCCTACAGGGCATGGGAGAGGGCCTGGAGGACAGAAGGAGGATATGCTATTGTCCTCAGGGGATATGCTGTCAAAATACTCAGCTGTCATCCTCAAGTCAGAACGCCGATTCTCACAGCCCATTCTGGATTTTACTCTGGGCTCTACAGCACAGAGGGGTGAGGGGGTGCAGCAGTTGGAGACGACTGTGTCCATGGCAACACAGGACCCTTCCAAGCTGAGGGGAAAGGATATAGGGCGCCCCCCTAAATCCTCTGAGCCGGTGGGGATGGGGGTAAGGGGGATACCCCAACCGTTGGAATTGACCCCACCCAAGCCACTTATATCAAAACCTCCACGCAAAAACAGATCTCTGCCCCAGGGACCTGAGGGGAGAGTCCAGGACAGCCCAGATGGAAGTGCCTCTTCTGGGTCTGAAACGAGAGACATCCCCCCTGGCTTCCAGTCTGTAGCTCCAGGGACAGAGGGAGTCAGAGAACCACCAGATCCTAGCGAACACATCGCAGATGGGAGCGAGAGCTCCAGAACCCCTGCAGAGATTCGGAGTAACACGGAGGAGGGAGGTTTGTTAGAGGTGGGGAGGAATTTAGAAGGCACACAAGAAGTTGTAGTTCAGGACACTGCAACATGGGGTGGTGGGGGTGTGCTTGGGTCGAAACACCCGAATATGAAGAAAATGAAGGGAGGAAAGCTGAAGAAATTTACCAAGAAGATGATGAGCAGATGGAAGGAGAGtcgagaggagaagggaggaaatGGAGAGATTCAGGATGACgacggagaaagagaggtggagagcgaAATGCCGTTAGTGCATCTCCATCAAGATCGACATTCAGCCAGGTTGCATGCTAATATGTCTGtcatagaggaagaggaggggaaagaggaggaggagaagaggagtggtGAGGCTACACAGGAGTCGCCAACGATGGAGCGGCCCAGCCAAGCTGAGACGGAGAGGAAGCCTGTGGGACACCATGCACGTTTTCAGAgCTCCTTCAGCTCTTTCAAGTTCAACTTCAGTCCCATCAGCTTGGTGGACGAGATTCTAACAGGAGATGAGTGGTCACCATTCCTGTCTATAAGGGACAGTCCAGCCCCCTCACCGTCCGTTTTCCAATCAGAGGTTGCTAGCCAACACAGTTATGATGAAGGCGACCAATTAAAGACTGGACCAGAGTTGCGTCTTCCCAACGACGTTCAACACAACCATGAGGACATAGGCTTTTCTTTATACGAGGCTGTCAGCTTCAGCCAATCAAGACCGAATGAGATTGTGGACAACCAATCGGACAACAGACAACAGGAAGTAGACAACAACAATGACACAGGAGCTGATGCCATTGCTGTCATCAAACCGAAGATACTATTGGAAAATGATGCAGCGGAGGAGAGTGAGTTGGACCACTCCAGACCCATATCTAAGGACATCCATGACACTGTTGAATTATGCAAGTCCCCCATAAGGACCCAATCAAAGGACCTTCTTGACTTCCTCTGTGTTGAGtcACTTGGAGTTCTGGACAGTTCTGCTCAGAAACATAAAATTCGTCTGAGCAAAAAGAGAAAGCACAGACTTCCGGGGCTAAAGAAGACAAaaACAGAGACCTTCAATGTAAGATGCACTGCAATCAAAGCCCCTGAAATCAAATTCCtcaacccctctcctccttccacacTCTCCCCCACATCACTCCCTTCTTCCTCcattccttcctcctccctctcttcctcctcttcctgctcctctccctcctatgTCTTTCCGTCCTCTTTCTACAACATCCCTACGTCCGCTGAAAAACAGGACCCTGTGACATCACCGACACAGGACAACCTCTCTGTTAAGaccactGAAAGCAGCAGAAAGCCAGGTTCAAGTCCCAAGCCGCCTCTGTCCAAATTCATGACAGTCCTGAAAGACAAAACCAAGAGGAAGCTTAAAAACTAGttacagtcttgtctcatcgcagcaactcccatatggactcgggagaggagaATAtcaagagccgtgcatcctctgaaacacaaccccatcaagtcgcactgcttcttgacacaatgcccacttaacccggtgTGTTTCCTCTGGTTTTgaacttttgcctgtccacgaccattctcttgcaccttaaactccaaccatctgcctcctgtgtctgcatttgggtctcgccttgtgtcatgataatgCAAAGCAAAAAATAAGGAACATTTGCAAACTGTATTCTGAAAAATAACCTTGCCAGAGTGTGGACTAGGTTGCTTCTCCCCTTTtcatactccctctctctcacacatttgGTACTCCCCTCTTTTATAGCAAATGTATTCTCACCTCCTGCCTGTAATTCCCTGTAAAATGTTTTTAATACATCTACAGTAATAGTggaatgatagtgtttcacaatatttatttattgtggCACATAAAATTGCATTTTAATGGTGCACCCTTCTTATTGGTCAATAAAAGACGGACACCTGgtt
>TU1828683
CATGACACTGTTGAATTATGCAAGTCCCCCATAAGGACCCAATCAAAGGACCTTCTTGACTTCCTCTGTGTTGAGaaACAGAGACCTTCAATGTAAGATGCACTGCAATCAAAGCCCCTGAAATCAAATTCCtcaacccctctcctccttccacacTCTCCCCCACATCACT

Function

NR:

description
uncharacterized protein LOC110497444

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573549.2 False 3413 mRNA 0.50 8 17565497 17573330
TU1828683 True 172 lncRNA 0.47 2 17570709 17571437
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497434 LOC106609897 coding upstream 91697 17453701 ~ 17473800 (+)
LOC110497435 LOC106602585 coding upstream 111923 17440996 ~ 17453574 (+)
LOC110497433 LOC106609895 coding upstream 145439 17417688 ~ 17420058 (+)
LOC110497431 LOC106609893 coding upstream 150587 17398188 ~ 17414910 (+)
LOC110497428 NA coding upstream 231301 17331309 ~ 17334196 (+)
LOC118941461 NA coding downstream 81 17573411 ~ 17578759 (+)
pold4 pold4 coding downstream 48066 17621396 ~ 17623478 (+)
LOC110497447 LOC106609905 coding downstream 52095 17625425 ~ 17644614 (+)
LOC110498668 LOC106609907 coding downstream 71779 17645109 ~ 17681920 (+)
LOC110497448 LOC106609908 coding downstream 167104 17740434 ~ 17749766 (+)
G1595369 LOC106609902 non-coding upstream 10239 17547801 ~ 17555258 (+)
G1595370 NA non-coding upstream 18140 17546834 ~ 17547357 (+)
G1595363 NA non-coding upstream 27681 17537596 ~ 17537816 (+)
G1595350 NA non-coding upstream 43388 17519383 ~ 17522109 (+)
G1595343 LOC105022884 non-coding upstream 52226 17511603 ~ 17513271 (+)
G1597210 NA non-coding downstream 225193 17798523 ~ 17798801 (+)
G1597213 NA non-coding downstream 227970 17801300 ~ 17801534 (+)
G1597214 NA non-coding downstream 228568 17801898 ~ 17802156 (+)
G1597215 NA non-coding downstream 229235 17802565 ~ 17802787 (+)
G1597241 NA non-coding downstream 270677 17844007 ~ 17844295 (+)
G1594955 NA other upstream 791788 16765543 ~ 16773709 (+)
G1594895 NA other upstream 887375 16675609 ~ 16678122 (+)
G1594737 LOC106610136 other upstream 1129130 16434453 ~ 16436367 (+)
G1594292 LOC106610101 other upstream 1281294 16279290 ~ 16284203 (+)
LOC110498487 zn271 other upstream 1331452 16219935 ~ 16238389 (+)
G1597295 NA other downstream 434393 18007723 ~ 18018250 (+)
G1597342 LOC106609914 other downstream 470081 18043411 ~ 18104592 (+)
G1598786 NA other downstream 1459555 19032885 ~ 19033176 (+)
LOC110497472 LOC106609985 other downstream 1753098 19326377 ~ 19328349 (+)

Expression

si:dkey-9i23.6 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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si:dkey-9i23.6 Expression in each Bioproject

Bar chart with 18 bars.
si:dkey-9i23.6 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network