LOC110498558 (LOC106609924)


Basic Information

Item Value
gene id LOC110498558
gene name LOC106609924
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 17956507 ~ 17962121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575221.2
GTGCGATACAATTAAATGTGTTGATATCTAGGACATGTGGTGATTTTAAAAAAATGCTGCAACTTGAATATAGGGAATTATTTCATGTTAATTTGAAAATATTAATAAGCTGATGAGAACCTTTCAAAAGAATGTTTTGACAAAAAAGGGTACCATCTGAAGTATAACGAATGCGTCTGTTGCGGATCAAGAATTTTTGAGGCCCGGAGGGGAACGATACCAATGGATGCTGAAAGTCAAGTAAACATAACTCCAATGGAGGATTGGGCGAATTCTTCTAGACTTGCTTGTGAATTCTCAAACTGCCGCAACAACTTTCCAGACCTGGAGGACAGCACCAAGCTGGTGGGAGTGCAAGTGATCCTCATCTTGGCTTACAGCACCATCATACTGTTCGGAGTCATCGGAAACTCCCTGGTGATATACGTGGTGTACAAGTTCAAAACTCTGCACACCGTCACCAATTTTTTCATCGTGAACCTGGCTGTGGCGGATCTGCTAGTGAATACTCTATGTCTGCCCTTTACTTTGATCAATACTCTCCATGGGGAGTGGAGGTTTGGCCAGGCATTGTGCTTCATGCTGCCCTTCTCCCAAGGCATGGCCGTGCACGTTTCCACCATCACGCTCAACATCATCGCCCTGGACCGCCACCGGAGCATCGTCTACCACCTGGAGACCAAGATGTCCAAGGAAATGTGCGCCGCTGTCATCATCATGACGTGGGCCATAAGCGCAGTCCTGGCCAGCCCGCTCGCCATCTTCCGGGAGTACGGGACGTTTGACCTTTCGCCCGAGCAGTCCATTCAGGTTTGCACGGAAAAGTGGCCAGGGAGCGGCATGGACGGCACCATCTATAGTATCTCCATGCTCCTGCTCCAGTACTGCCTGCCGCTGGCCATCAACTCCTTCGCCTACATCCGCATCTGGAGTAAGCTGAAGAACCACGTGAGTCCGGCAGGGAGGAACAACCGCCACCAGCGCAAGAGGAAGACCACTAAGATGCTGGTGATCGTGGTGGTGGTGTTTGCAGTGAGCTGGCTGCCTCTCCACGCCTTCCAGCTGGCCATTGACATTGACAACAGTGTCTTGGAAATGAAAGACTTCAAGCTGCTTTTCACCATGTTCCACATCGTGGCCATGTGCTCGACCTTCGTCAACCCCATCCTCTATGGGTGGATGAACAACAACTACCGGACTgcgtttctgtctgtgtgtaagtgCAGCCAACCTGTCAATTCTGGGTCGAGGAACATCATGAGCAGAAAGACACTGAGGGAAAAAGACATGAGCGATACAGATTTCAAAGCGACTAAAGTCTGAATTCATATTATCAACTCTAATGTCTGTTCTGTGCAACCTACTGTAAGAGTGAATTATGGATAAAACATTTTGCTTTTTTACATTAGTTTATTGTCAAAAGGTTCAGTGAAGAACCAAGTGTGTTCAAAATGTGTAAATGATCAATTTCATGCAAGTGCCAAATGCATTGCTGACTTGTGCCATTGACATTTAAGAACTATTTTGGCCACATGCAAGTGTTGATATTTAAATGCTGATCGTGGGACGAAAATGTTACATTGCCTTTGTGAATGCTACCATAGT

Function

NR:

description
neuropeptide Y receptor type 2-like

GO: NA

KEGG:

id description
K04205 NPY2R; neuropeptide Y receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575221.2 True 1605 mRNA 0.47 2 17956507 17962121
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497454 LOC106609867 coding upstream 14962 17937002 ~ 17941545 (+)
LOC110497453 lrat coding upstream 20173 17934316 ~ 17936334 (+)
LOC110497449 LOC106609909 coding upstream 112747 17806915 ~ 17843760 (+)
LOC110497448 LOC106609908 coding upstream 206741 17740434 ~ 17749766 (+)
LOC110498668 LOC106609907 coding upstream 274587 17645109 ~ 17681920 (+)
LOC110497458 LOC100135888 coding downstream 198976 18161097 ~ 18218659 (+)
LOC118941462 NA coding downstream 840606 18802727 ~ 18815594 (+)
LOC118941552 NA coding downstream 876431 18838552 ~ 18838607 (+)
LOC110497463 LOC106609940 coding downstream 1161588 19123709 ~ 19141362 (+)
LOC110497461 LOC106609942 coding downstream 1181049 19143170 ~ 19147993 (+)
G1597277 NA non-coding upstream 48576 17907417 ~ 17907931 (+)
G1597263 LOC106609911 non-coding upstream 57580 17893485 ~ 17898927 (+)
G1597251 NA non-coding upstream 94556 17861678 ~ 17861951 (+)
G1597246 NA non-coding upstream 104357 17851942 ~ 17852150 (+)
G1597245 LOC106592462 non-coding upstream 104748 17848349 ~ 17851759 (+)
G1597307 NA non-coding downstream 2809 17964930 ~ 17966176 (+)
G1597334 NA non-coding downstream 44131 18006252 ~ 18006457 (+)
G1597295 NA non-coding downstream 45602 18007723 ~ 18018250 (+)
G1597336 NA non-coding downstream 63409 18025530 ~ 18032904 (+)
G1597341 LOC106572245 non-coding downstream 76231 18038352 ~ 18043336 (+)
pold4 pold4 other upstream 333034 17621396 ~ 17623478 (+)
G1594955 NA other upstream 1182798 16765543 ~ 16773709 (+)
G1594895 NA other upstream 1278385 16675609 ~ 16678122 (+)
G1594737 LOC106610136 other upstream 1520140 16434453 ~ 16436367 (+)
G1594292 LOC106610101 other upstream 1672304 16279290 ~ 16284203 (+)
G1597342 LOC106609914 other downstream 81290 18043411 ~ 18104592 (+)
G1598786 NA other downstream 1070764 19032885 ~ 19033176 (+)
LOC110497472 LOC106609985 other downstream 1364307 19326377 ~ 19328349 (+)
G1598960 NA other downstream 1369620 19331741 ~ 19332220 (+)

Expression

LOC110498558(LOC106609924) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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LOC110498558(LOC106609924) Expression in each Bioproject

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LOC110498558(LOC106609924) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4.
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Co-expression Network