LOC110498559 (LOC106602637)


Basic Information

Item Value
gene id LOC110498559
gene name LOC106602637
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 17971731 ~ 17976721 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575222.2
ATCAGGGCCATTTCGGTTCAGGGTCCAAACGTGCTGCAAACCGGCTTTCACCCCAGAGATCAGCATGAGAAGACGAAGCTCCTGCACACCTGAGGCCCCTCTGTCTCCAAGAGAAGGCAACGAGGTTGAGTGGACCACACCAGTTTCACAGCACGTGAAGAGAACGCAGCCTCTTCTTCATAACTGTAACAGCAAATCAGGGATACCTTCAGAAAAGTTGGACAATGTTTCATTGATGAAAGAAACAAATAAATCAGAGATGCATGGAGCATCCTACAGGCATTCACCGAGGGCTTTTGACTCTGACTGCTCCCCGAGACGTAGTGGCTCAGGAGACCGAGCACTCGGAGCAGACTACAAATCTGAGATGATATTCGATTTGGAGAATACGGTGGACAGACTGAAAAACGCTCTGGTATCACTGGAGGAGGACAACCTCAGCCTCAACAAGAAGATAAGAGAAAACATGGCAGAAGACCGCCCATTTTCAACCAATCACAATGTCTCAGGCTCAACAAGTGGCAGCAATTCACAGAAAATGCCTGGTGGTCACACTCACAGTCCCACCTCCAAACTCATTACACACCCTGTCACTTTCAACATGGCCAAAACATACCCAGAAAGTCAGAGGCAAGATACACCATCCAAGATCGAGGAGACTAGGACTAGAGAGATGCTCAAAATGGAGAGCCTGTCCTTGGAAGACAGGTGTGTTTACTTGGAGAAAGAGAAACGGGACTTGCAGAGGAAGCTGCAGAAGACAGAGGACTACTGCAAAGATTGCGTCCGCGAGCTCAAGAGGATCCTCCCAAAGTATGAGGACCTCAAAGCCTCGAATAAAACCCTGGATAAGCTCAACAAGCAACAGGCTGCAGAGAACCACAGACTCGTCGACGCCCTTGAGGCCGGGAGCCAGGCAGGGGAGAGATCCAGGGATCACCACCTGGCTCAGGAGCCTAAAGAAGGGGGTAGTGACAACAAGGTGCGGGTTCAACTAGAGAGGGCCAACGATCTCTGCACCCAGCTTACCCAGGAGAAGGGGCAGCTGGAGGACCGGATGGCCTCGCTGGCAAGGGAGGTCAGCCACCTCACGAATGAGCTGGATATGAGCTGGCCCGAGCTCCATCGGCTGGGGTCCAGGAGGAGAAGCTCCCTTGAGGGGAGCACAACTAGGGACGGCAGCACTCTGGCCTCGTTGGCCAACAAACACCCGGCCGAACGCATCCTGGACAGCGTAGGGAAAGAGTGCAAGGCCACGTCGGGCGCCATGGCCCATCTCAAAGAGGAGAACAAGACACTACGAGAGAACCTCAAACAGAGCGTCAAGAGGGGCGAGGAGGCAGAGGGCGGAGCCAAGCAGCTGAGGGAAGAGCAGGCCATATTAGAAAGCTGCCTGCTCACGGTGCAGAAGGAGAAAGACCTGCTTCAGCTGGAGGTGCGGCAGCTCCACCAGGAGTACATCGAGCTCAGCAGTAGCATCTCGCTGCAGCTGAGAGAGAGGAGCCCCGTCGCCAGTACCAGGATATTAGCAGGGTCACATGTGGTGACTGATGGTAGTGATAGTGGAGCCAGGCAGCAAGAGAGTCCAAGGCAGCCTCTGAACAGCAGCCCTATTACCAGAGAAATGCTGGATGGCCCTGTAGGCAGAGAGGCAATTGTTCATATAAGGAAGCGTTtcgaggaggaggagcagagagccCAGAGGTACAAAAACATCATCAATCAGAATGAATGAGGCTGAAGCTGGAATAGCGGGCCAGGCAGACTGGATGTTGACCTCTACCTCCCGTACCACGAGGGGTCAGGAGAGGTGAAGCATACTGTAGCCTACCGTAGAGCTTGTTGCATCACTTTACCAACAATATGCCCTTCACAAGGTCATGTACCGTATGCACTGTACAGATTTTAATTCCCTGATTATATTATGCTTTTCAAAATATTTTGTCAGTGTTATTTATCATTTATAATAGTTTTTAGATAAATGACATGTCAAGGCAGTTTGTGGCTAGG

Function

NR:

description
coiled-coil domain-containing protein 110-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575222.2 True 2010 mRNA 0.52 3 17971731 17976721

Neighbor

gene id symbol gene type direction distance location
LOC110497452 LOC106602564 coding downstream 51023 17912923 ~ 17920708 (-)
LOC110497451 LOC106609911 coding downstream 68247 17892641 ~ 17903484 (-)
LOC110498557 LOC106609922 coding downstream 96338 17873635 ~ 17875393 (-)
LOC110497450 LOC106592462 coding downstream 119913 17848842 ~ 17851818 (-)
zdhhc5a LOC106609866 coding downstream 180166 17750224 ~ 17791565 (-)
LOC110497455 pdli3 coding upstream 3335 17980056 ~ 18005750 (-)
LOC110497456 LOC106609914 coding upstream 30936 18007657 ~ 18094529 (-)
LOC118941355 NA coding upstream 169437 18146158 ~ 18149719 (-)
LOC110497459 LOC106609939 coding upstream 498675 18475396 ~ 18579393 (-)
LOC110497460 LOC106609941 coding upstream 1171681 19148402 ~ 19184184 (-)
G1597450 NA non-coding downstream 102264 17858275 ~ 17869467 (-)
G1597426 LOC106609909 non-coding downstream 144658 17824231 ~ 17827073 (-)
G1597408 NA non-coding downstream 172529 17798971 ~ 17799202 (-)
G1597538 NA non-coding upstream 30083 18006804 ~ 18007008 (-)
G1597610 NA non-coding upstream 141124 18117845 ~ 18118182 (-)
G1597629 NA non-coding upstream 158933 18135654 ~ 18135888 (-)
G1597632 NA non-coding upstream 160978 18137699 ~ 18137917 (-)
G1597639 NA non-coding upstream 167926 18144647 ~ 18144964 (-)
LOC110497446 NA other downstream 348255 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 472288 17494669 ~ 17530745 (-)
G1596940 NA other downstream 533853 17437664 ~ 17437878 (-)
G1596879 NA other downstream 683714 17286530 ~ 17288017 (-)
G1596856 LOC106613263 other downstream 728708 17242606 ~ 17243023 (-)
G1598418 NA other upstream 786994 18763715 ~ 18764422 (-)
G1599097 LOC106609944 other upstream 1232571 19209292 ~ 19209964 (-)
G1599197 NA other upstream 1395588 19372309 ~ 19381751 (-)
G1599717 NA other upstream 1578876 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 1659297 19636018 ~ 19637027 (-)

Expression


Co-expression Network