Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941355 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 18146158 ~ 18149719 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037600.1 | True | 634 | mRNA | 0.45 | 3 | 18146158 | 18149719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497456 | LOC106609914 | coding | downstream | 51629 | 18007657 ~ 18094529 (-) |
| LOC110497455 | pdli3 | coding | downstream | 140408 | 17980056 ~ 18005750 (-) |
| LOC110498559 | LOC106602637 | coding | downstream | 169437 | 17971731 ~ 17976721 (-) |
| LOC110497452 | LOC106602564 | coding | downstream | 225450 | 17912923 ~ 17920708 (-) |
| LOC110497451 | LOC106609911 | coding | downstream | 242674 | 17892641 ~ 17903484 (-) |
| LOC110497459 | LOC106609939 | coding | upstream | 325677 | 18475396 ~ 18579393 (-) |
| LOC110497460 | LOC106609941 | coding | upstream | 998683 | 19148402 ~ 19184184 (-) |
| LOC110497466 | LOC106609946 | coding | upstream | 1069415 | 19219134 ~ 19228766 (-) |
| LOC110497469 | LOC106609949 | coding | upstream | 1103653 | 19253372 ~ 19270658 (-) |
| LOC110497471 | LOC106609951 | coding | upstream | 1153812 | 19303531 ~ 19310735 (-) |
| G1597639 | NA | non-coding | downstream | 1194 | 18144647 ~ 18144964 (-) |
| G1597632 | NA | non-coding | downstream | 8241 | 18137699 ~ 18137917 (-) |
| G1597629 | NA | non-coding | downstream | 10270 | 18135654 ~ 18135888 (-) |
| G1597610 | NA | non-coding | downstream | 27976 | 18117845 ~ 18118182 (-) |
| G1597538 | NA | non-coding | downstream | 139150 | 18006804 ~ 18007008 (-) |
| G1597647 | NA | non-coding | upstream | 3054 | 18152773 ~ 18153239 (-) |
| G1597650 | NA | non-coding | upstream | 4772 | 18154491 ~ 18154721 (-) |
| G1597833 | NA | non-coding | upstream | 157801 | 18307520 ~ 18307757 (-) |
| G1597842 | NA | non-coding | upstream | 165279 | 18314998 ~ 18315213 (-) |
| G1598084 | NA | non-coding | upstream | 252498 | 18402217 ~ 18408359 (-) |
| LOC110497446 | NA | other | downstream | 522682 | 17615897 ~ 17623476 (-) |
| G1596970 | LOC106609899 | other | downstream | 646715 | 17494669 ~ 17530745 (-) |
| G1596940 | NA | other | downstream | 708280 | 17437664 ~ 17437878 (-) |
| G1596879 | NA | other | downstream | 858141 | 17286530 ~ 17288017 (-) |
| G1596856 | LOC106613263 | other | downstream | 903135 | 17242606 ~ 17243023 (-) |
| G1598418 | NA | other | upstream | 613996 | 18763715 ~ 18764422 (-) |
| G1599097 | LOC106609944 | other | upstream | 1059573 | 19209292 ~ 19209964 (-) |
| G1599197 | NA | other | upstream | 1222590 | 19372309 ~ 19381751 (-) |
| G1599717 | NA | other | upstream | 1405878 | 19555597 ~ 19557357 (-) |
| G1599760 | LOC106609957 | other | upstream | 1486299 | 19636018 ~ 19637027 (-) |
