Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110497460 |
| gene name | LOC106609941 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 19148402 ~ 19184184 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pericentriolar material 1 protein-like |
| id | description |
|---|---|
| K16537 | PCM1; pericentriolar material 1 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036954392.1 | False | 7716 | mRNA | 0.56 | 40 | 19148402 | 19183458 |
| XM_036954389.1 | False | 7739 | mRNA | 0.56 | 40 | 19148402 | 19183463 |
| XM_036954388.1 | False | 7481 | mRNA | 0.57 | 40 | 19148402 | 19184184 |
| XM_036954390.1 | False | 7478 | mRNA | 0.57 | 40 | 19148402 | 19184184 |
| XM_036954391.1 | False | 7463 | mRNA | 0.57 | 40 | 19148402 | 19184184 |
| XM_036954393.1 | False | 7424 | mRNA | 0.57 | 39 | 19148402 | 19184184 |
| XM_036954394.1 | False | 7328 | mRNA | 0.57 | 39 | 19148402 | 19184184 |
| XM_036954395.1 | True | 7460 | mRNA | 0.57 | 40 | 19148402 | 19184184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497459 | LOC106609939 | coding | downstream | 569009 | 18475396 ~ 18579393 (-) |
| LOC118941355 | NA | coding | downstream | 998683 | 18146158 ~ 18149719 (-) |
| LOC110497456 | LOC106609914 | coding | downstream | 1053873 | 18007657 ~ 18094529 (-) |
| LOC110497455 | pdli3 | coding | downstream | 1142652 | 17980056 ~ 18005750 (-) |
| LOC110498559 | LOC106602637 | coding | downstream | 1171681 | 17971731 ~ 17976721 (-) |
| LOC110497466 | LOC106609946 | coding | upstream | 34950 | 19219134 ~ 19228766 (-) |
| LOC110497469 | LOC106609949 | coding | upstream | 69188 | 19253372 ~ 19270658 (-) |
| LOC110497471 | LOC106609951 | coding | upstream | 119347 | 19303531 ~ 19310735 (-) |
| LOC110497474 | NA | coding | upstream | 180507 | 19364691 ~ 19368647 (-) |
| LOC118941463 | NA | coding | upstream | 190621 | 19374805 ~ 19377156 (-) |
| G1599064 | NA | non-coding | downstream | 5653 | 19142523 ~ 19142749 (-) |
| G1598733 | NA | non-coding | downstream | 137004 | 18973765 ~ 19011398 (-) |
| G1598730 | NA | non-coding | downstream | 188816 | 18958253 ~ 18959586 (-) |
| G1598722 | NA | non-coding | downstream | 199063 | 18946266 ~ 18949339 (-) |
| G1598568 | NA | non-coding | downstream | 282376 | 18865824 ~ 18866026 (-) |
| G1599076 | NA | non-coding | upstream | 4597 | 19188781 ~ 19189019 (-) |
| G1599131 | NA | non-coding | upstream | 95378 | 19279562 ~ 19279871 (-) |
| G1599137 | NA | non-coding | upstream | 107848 | 19292032 ~ 19292237 (-) |
| G1599146 | NA | non-coding | upstream | 130654 | 19314838 ~ 19316046 (-) |
| G1599147 | NA | non-coding | upstream | 132054 | 19316238 ~ 19316632 (-) |
| G1598418 | NA | other | downstream | 383980 | 18763715 ~ 18764422 (-) |
| LOC110497446 | NA | other | downstream | 1524926 | 17615897 ~ 17623476 (-) |
| G1596970 | LOC106609899 | other | downstream | 1648959 | 17494669 ~ 17530745 (-) |
| G1596940 | NA | other | downstream | 1710524 | 17437664 ~ 17437878 (-) |
| G1596879 | NA | other | downstream | 1860385 | 17286530 ~ 17288017 (-) |
| G1599097 | LOC106609944 | other | upstream | 25108 | 19209292 ~ 19209964 (-) |
| G1599197 | NA | other | upstream | 188125 | 19372309 ~ 19381751 (-) |
| G1599717 | NA | other | upstream | 371413 | 19555597 ~ 19557357 (-) |
| G1599760 | LOC106609957 | other | upstream | 451834 | 19636018 ~ 19637027 (-) |
| G1599758 | LOC106609957 | other | upstream | 454576 | 19638760 ~ 19642003 (-) |
