LOC110497474


Basic Information

Item Value
gene id LOC110497474
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19364691 ~ 19368647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573596.2
ctcccactacaaccacagcggctaccactacaaccacagctgctcccactacaatcACAGcgtctcccactacaaccacaccgtctcccactacaaccacagcgtctcccactacaaccactgtggCAACCACAACGATCACAGcgactcccactacaaccacagcggctcacACTACAACCACAAGggttcccacaacaaccacagagactCCCACAATAACCACAGtaactcccacaacaaccacagctgatgttACAACAATGACAgcagctcccactacaaccacagcggctcctaCTACAACTACAGCGACTCATTTAACAACCACTgcgtctcccacaacaaccacagctgatgttacaacaaccacagcggctcccactacaaccactgtggCAACCAAAATGACCACAGTTTCTCCCACTACAACCATAGCGGCGCCCACAACAACTACAGAGGCTCCCACGGCAACCACAGCGGCACCCACAACAagcacagcggctcccacaacaaccacagcatctcccacaacaaccacagctgatgttacaacaaccacagcgtctcccacaacaaccccaGCTGCTCCCACATCAACTACAGCTGCTCCTACAATAACAATAGTTTCTCTCACTaataccaccacaacaacaacagcagctttTGCTACAAGAACAACAACAGTTGCTCTAACTACCAACGCAGCTGGAGCTACCATAACTACATCTAactccacaacaacaacagcctcaCCTACAGCAACCACAGCTGCACCAACAGCAACCACAGCTGTACCAACAGCAACAGTAACAATATCCCCAGCTGCTGCTATGACAACAGCTACccccacaacaactgcagctgCCCCATCAACAACCACAGCAGTACCAACGTtaaccacagtggctcccacaacaaccacagctgctcccacagcAACCACAGCAGCACTGTTGACATCTACAGCTGTTTCTTCAACAACCACAGTCGTCCCCACAACAATTTCAGCTGCTCAcataacaaccacagctgctgccaCAACAATCACAATTTTACCCATAACAACCACAGCCACCAACACAAAAAACACAGCTTATCCCACCttaaccacaacaaccacagcagcagCAACTACAACTACAGCTCCATTTACAAAAACAgtagctcccacaacaacagTTGCTCACTCAAAAGCTACAGCTGCCCCCACAACAACTAAAGCTGCTGCTACAATAACACCAGTTGCTCCCACTACAACtgccaccacaacaacaacagcagctttTGCCACAAGAACAACAGCTGCTGTAACTACCAGCACAGCTGGTGCTACCACAACTACAGCTAactccacaacaaccacagccccACCTACtgcaaccacagctgctcccacaacaaccacagttgcCCCTACAACTACCACTGCTGCAGCCACAGCACCAGGTGCTGCTACAACAACCCTGGCTGCTCCCACAACGACCACAGCttcaccatcaacaacaacaactcttgctacaacaactactgttTCCCCAACCACCGCATCCACTGACCCTCCAAGAGCAAATGAAGGTGTACTTATTCTACAGTTCCGGATGAATCGACAATTTTTGGAAGCCTACAAAAATCCACAGTCCCAGGATTACTTTACTTTGGCTTTAAATGTCACAACTGAGTTGAATCGAGGATACAAAAAGGTATATCCTGGAATCTTCCTCAGATGCATCATCATCAGTTTCTGGTCTGGTTCTGTGGGTGTGACAACCAACTTAATCTTCACAAACCAGTCTGTGGTCCCTAACATTACAAATGTAGAGGACTCCCTCAAGACATCCATCAACACGTCCAACGTCTTCTTAGATGTTATTACTGACAGTATCAAAGCGGaaTTCCAGAATtccacgactactactactgcaaccaCCACAACAGCAGCTACACAAACGACAGTGGCTGCACCTACCTATAGCAGCACTATGGCAAGAAACAGACCTCAAGAAGTGGTCACTTTACTAATTGTTTTAATGCTGATCTATTTCTTCTTAGCAGAATAACTCTAGGACTGAAATAAACCCATTAAGTATGACATATTCTATAATAAAGGCATATATAACTTCAGCTATTAAGATTAAGATATGTTAAGAAACGACTAATAATCAAATAGTAATATCTTAGTTAAAGTAATTGCTTGTCTATATGATTATGTATAAAAACAAAATAATGCTGGTAATGTAATGAAGCTGAAAGTAAATGTGTGATGTTGTTCTATTTATATGTTGTTTTAGTATATTGCAATAGACTAtgaataatataatagaatataaatacatttgtataTTATGAAATTAACTAAGGAAATTATAAAATTCTTGGAAACCTAATTGTCTATTCTGTAATATATAGTTTCTTCCTAATTGTAACGCAACTCTTGGCAAACTCTTTGGAAATTACTTTGAAAACGCTTGAATAAATAATGCCTAAGAAAAACACATAAATAAATACACTTTAGACTGTAGATGTATTGTAATAAAACTTAAATAAACACAAATTGATCTTA

Function

NR:

description
mucin-5AC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573596.2 True 2563 mRNA 0.44 4 19364691 19368647

Neighbor

gene id symbol gene type direction distance location
LOC110497471 LOC106609951 coding downstream 53956 19303531 ~ 19310735 (-)
LOC110497469 LOC106609949 coding downstream 94033 19253372 ~ 19270658 (-)
LOC110497466 LOC106609946 coding downstream 135925 19219134 ~ 19228766 (-)
LOC110497460 LOC106609941 coding downstream 180507 19148402 ~ 19184184 (-)
LOC110497459 LOC106609939 coding downstream 785298 18475396 ~ 18579393 (-)
LOC118941463 NA coding upstream 6158 19374805 ~ 19377156 (-)
LOC118941546 NA coding upstream 29121 19397768 ~ 19420467 (-)
LOC110497535 LOC106602669 coding upstream 148615 19517262 ~ 19524270 (-)
LOC110498562 NA coding upstream 156459 19525106 ~ 19535210 (-)
LOC110497533 LOC106609955 coding upstream 225706 19594353 ~ 19598996 (-)
G1599172 NA non-coding downstream 6262 19355580 ~ 19358429 (-)
G1599167 NA non-coding downstream 16068 19348150 ~ 19348623 (-)
G1599154 NA non-coding downstream 32381 19331769 ~ 19332310 (-)
G1599133 LOC106609985 non-coding downstream 36341 19326326 ~ 19328350 (-)
G1599147 NA non-coding downstream 48059 19316238 ~ 19316632 (-)
G1599206 NA non-coding upstream 23304 19391951 ~ 19392586 (-)
G1599216 NA non-coding upstream 67088 19435735 ~ 19441084 (-)
G1599220 NA non-coding upstream 72824 19441471 ~ 19441676 (-)
G1599703 NA non-coding upstream 169476 19538123 ~ 19538351 (-)
G1599705 NA non-coding upstream 170389 19539036 ~ 19539283 (-)
G1599097 LOC106609944 other downstream 154727 19209292 ~ 19209964 (-)
G1598418 NA other downstream 600269 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1741215 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 1865248 17494669 ~ 17530745 (-)
G1596940 NA other downstream 1926813 17437664 ~ 17437878 (-)
G1599197 NA other upstream 3662 19372309 ~ 19381751 (-)
G1599717 NA other upstream 186950 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 267371 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 270113 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 739268 20107915 ~ 20108791 (-)

Expression


Co-expression Network