LOC118941463


Basic Information

Item Value
gene id LOC118941463
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19374805 ~ 19377156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954414.1
acatcagctcccactacgaccacagcatctccaactacaaccactgagtctcccactacaaccacagcggctcccactacaaccacagctgctcccactacaaccacagtggctcccactacaaccacaacgACTCCCTCATCAACCACTGCtactcccactacaaccacagctgatgttataacaacgacatcagctcccactacgaccacagaatctcccactacaaccactgcggctcccactacaaccacagcggctccccctacaaccacagctgctcccactacaaccacagcggctcccagtaCAACCACtgaggctcccactacaaccacagcggctcccactacaaccacagctgctcccactacaaccacagtggctcccactacaaccacaacgCCTCCCGCAACAACCACTGcgactcccactacaaccacagcttacCTCACAACACCCAcagaggctcccacaacaaccacagcggctccaaatacaaccacagtgtctcccactacaacagctcccatatcaacaacaaaagctgaggtgacaacatccactgctggcactaccacaacggctcccactacaaccactgcgactcccactacaaccacagtggctcccacaacaaccacagcggctcccactacaaccacagtggctcccacaacaaccactgcggctcccactacaaccacagtggctcccacaacaaccacagcgtctCCCACAACCCCATCTgcttccacaacaaccacagctgatgttATAACAACGACATCAGATCCCACTACGACCACAGcatctcccactacaaccactgcggctcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccacaactgctcccactacaaccacagcggctcccagtaCAACCACtgaggctcccactacaaccacagcggctcccactacaaccacagctgctcccactgcaaccacagtggctcccactacaaccacaacgACTCCCTCAAAAACCACTGtgactcccactacaaccacagcttacctcacagcaaccacagtggctcccacaacaatcacagcgtctcccacaacaaccccatctgcttccacaacaaccacagctgatgttataacaacgacatcagctcccactacgaccacagcatctcccactacaaccactgcggctcccacaacaactacagctgaTGTTACAACAACCACTGCggcaaccacaacaaccacagcggctcccaatacaaccacagcggctctcaTTACAACCACTGCGGCTACCACTACAACCACAGagactcccactacaaccacagcttacCTCACAGCAACCACagaagctcccacaacaaccacagcgactcccacaacaaccactgcgactcccactacaacaacagaggcttccacaacaaccacagagactCCCACAACAAatacagcggctcccacaacaaccacagcggctcccacttcaaccacagcggctcccactacaaccacagcatcTCACAGTACAACCACtgaggctcccactacaaccacagcggctccccctacaaccacagctgctcccactacaaccacagtggctcccactacaaccacaacgactccctcaacaaccactgctactcccactacaaccacagctgatgtAATAACAACGACATCAGCTCCCACTACGACCACAGAATCTCCCACTACAAtcactgcggctcccactacaaccacagcggctcccactacaaccacagctgctcccactacaaccgcAGTGGCTCCCAGTACAACCTCtgaggctcccactacaaccacagcggctcccactacaaccacagctgctcccactacaaccacagtggctcccactacaaccacaacgactccctcaacaaccactgcgactcccactacaaccacagcttacCTCACAACACCCAcagaggctcccacaacaaccacagcggcttcaaatacaaccacagtgtctcccactacaacagctcccatatcaacaacaaaagcTGAGGTGACAACATCAACTGCTGGCActaccacaacggctcccactacaaccacagcggctcccactacaaccactacggctcccactacaaccacagtgtctcccactacaacagctccCAAATCAACAACAAAAGCTGACgtaacaacatccactgctggccctaccacaacggctcccactacaaccacagcggctcccactacaaccactgcgactcccactacaacaacagtggctcccacaacaaccacagcggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954414.1 True 2352 mRNA 0.55 1 19374805 19377156

Neighbor

gene id symbol gene type direction distance location
LOC110497474 NA coding downstream 6158 19364691 ~ 19368647 (-)
LOC110497471 LOC106609951 coding downstream 64070 19303531 ~ 19310735 (-)
LOC110497469 LOC106609949 coding downstream 104147 19253372 ~ 19270658 (-)
LOC110497466 LOC106609946 coding downstream 146039 19219134 ~ 19228766 (-)
LOC110497460 LOC106609941 coding downstream 190621 19148402 ~ 19184184 (-)
LOC118941546 NA coding upstream 20612 19397768 ~ 19420467 (-)
LOC110497535 LOC106602669 coding upstream 140106 19517262 ~ 19524270 (-)
LOC110498562 NA coding upstream 147950 19525106 ~ 19535210 (-)
LOC110497533 LOC106609955 coding upstream 217197 19594353 ~ 19598996 (-)
LOC118941464 NA coding upstream 217197 19594353 ~ 19609921 (-)
G1599172 NA non-coding downstream 16376 19355580 ~ 19358429 (-)
G1599167 NA non-coding downstream 26182 19348150 ~ 19348623 (-)
G1599154 NA non-coding downstream 42495 19331769 ~ 19332310 (-)
G1599133 LOC106609985 non-coding downstream 46455 19326326 ~ 19328350 (-)
G1599147 NA non-coding downstream 58173 19316238 ~ 19316632 (-)
G1599206 NA non-coding upstream 14795 19391951 ~ 19392586 (-)
G1599216 NA non-coding upstream 58579 19435735 ~ 19441084 (-)
G1599220 NA non-coding upstream 64315 19441471 ~ 19441676 (-)
G1599703 NA non-coding upstream 160967 19538123 ~ 19538351 (-)
G1599705 NA non-coding upstream 161880 19539036 ~ 19539283 (-)
G1599097 LOC106609944 other downstream 164841 19209292 ~ 19209964 (-)
G1598418 NA other downstream 610383 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1751329 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 1875362 17494669 ~ 17530745 (-)
G1596940 NA other downstream 1936927 17437664 ~ 17437878 (-)
G1599717 NA other upstream 178441 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 258862 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 261604 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 730759 20107915 ~ 20108791 (-)
G1600030 NA other upstream 750055 20127211 ~ 20136561 (-)

Expression


Co-expression Network