LOC118941546


Basic Information

Item Value
gene id LOC118941546
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19397768 ~ 19420467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955484.1
acagctgctcccacaacaaccactgtggctcccactacaaccacagcggctccctctacaaccacagctgctcccactacaaccactgtggctcccaaaacaaccacagcggctcccacaacaaccacagcttacctcacaacaaccacagaagctcccacaacaaccacagcgactcccaaAACAACCACTGTGACTCCCACTACAACAAcagaggctcccacaacaaccacagagactcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccactgcggctcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccacagcggctccatctacaaccacagctgctcccacaacaaccactgtggctcccactacaaccacagcggctccctctacaaccacagctgctcccactacaaccactgtggctcccaaaacaaccacagcggctcccacaacaaccacagcttacctcacaacaaccacagaagctcccacaacaaccacagcgactcccaaAACAACCACTGTGACTCCCACTACAACAAcagaggctcccacaacaaccacagagactcccacaacaactacagcggctcccacaacaaccacagcggctcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccacagctgatgtTATAACAACGACATCAGCTCCCACTACGACCACAACAtatcccactacaaccactgcggctcccactacaaccacagcggctcccactacaaccgcagctgctcccactacaaccacagcggctcccagtacaaccggctcccactacaaccacaacgACTCCctcaacaaccacagcgactcccacaacaaccacagcggctccaaaTACAACCACGgtgtctcccactacaacagctcccatatcaacaacaaaagcTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955484.1 True 987 mRNA 0.56 2 19397768 19420467

Neighbor

gene id symbol gene type direction distance location
LOC118941463 NA coding downstream 20612 19374805 ~ 19377156 (-)
LOC110497474 NA coding downstream 29121 19364691 ~ 19368647 (-)
LOC110497471 LOC106609951 coding downstream 87033 19303531 ~ 19310735 (-)
LOC110497469 LOC106609949 coding downstream 127110 19253372 ~ 19270658 (-)
LOC110497466 LOC106609946 coding downstream 169002 19219134 ~ 19228766 (-)
LOC110497535 LOC106602669 coding upstream 96795 19517262 ~ 19524270 (-)
LOC110498562 NA coding upstream 104639 19525106 ~ 19535210 (-)
LOC110497533 LOC106609955 coding upstream 173886 19594353 ~ 19598996 (-)
LOC118941464 NA coding upstream 173886 19594353 ~ 19609921 (-)
LOC110498685 LOC106602680 coding upstream 247792 19668259 ~ 19669604 (-)
G1599206 NA non-coding downstream 5182 19391951 ~ 19392586 (-)
G1599172 NA non-coding downstream 39339 19355580 ~ 19358429 (-)
G1599167 NA non-coding downstream 49145 19348150 ~ 19348623 (-)
G1599154 NA non-coding downstream 65458 19331769 ~ 19332310 (-)
G1599133 LOC106609985 non-coding downstream 69418 19326326 ~ 19328350 (-)
G1599216 NA non-coding upstream 15268 19435735 ~ 19441084 (-)
G1599220 NA non-coding upstream 21004 19441471 ~ 19441676 (-)
G1599703 NA non-coding upstream 117656 19538123 ~ 19538351 (-)
G1599705 NA non-coding upstream 118569 19539036 ~ 19539283 (-)
G1599735 NA non-coding upstream 163445 19583912 ~ 19584259 (-)
G1599197 NA other downstream 16017 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 187804 19209292 ~ 19209964 (-)
G1598418 NA other downstream 633346 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1774292 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 1898325 17494669 ~ 17530745 (-)
G1599717 NA other upstream 135130 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 215551 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 218293 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 687448 20107915 ~ 20108791 (-)
G1600030 NA other upstream 706744 20127211 ~ 20136561 (-)

Expression


Co-expression Network