LOC110497533 (LOC106609955)


Basic Information

Item Value
gene id LOC110497533
gene name LOC106609955
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19594353 ~ 19598996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573675.2
TCGGTGACCCAGAGGTGCTTACGCTTGCATTTGGATTAGCAAATTGTAGCTACAACAACAGAACTACAACAATTCATACATGTATTGAGCAACAAACACCTTCATACGGAGTATAACTATTAGTTAAATCAAACATAAGACGCAGACCGCAATTTGTGACTGGATTAAAGCGAAAGAAGGACGAAGAGACGGAAAAATATAGatactagttagctagctaacgtaaggCTAGCAGCAAGCTGACACATGAATTCTCTCGTTGGCTATGGCGTGTCCTCTGATTCTGACAGCGATGGGGATATTGGAAACGACAAGAAGACTGAGAGCAAGGTGGATGGAGAGACCCAGAAGAAGGGCCGCAATTTCCTCCTAGAGTCCGGGTCAGCCTCCAGTGAGTCAGACTGTGACTTCGACCCAGAGGAAGAGGGGGACACCGTATCTCAACTAAAACCTAAACGCCCTCCTCCTGCCTGTATGGCACCCCCCTCTGAGTCCCggacccctctcctccccgcaCCCCCTAGTTCCCTCTCCCACAaactcccccctccacccctcggGGCCTCGTCCAAGAGTGGCGTATTCGCCAACCCCTTCAAGGCGCAAGCCGACCAGAAGCTCAATGTCTTGCAGAAGCACGTCCCTCTCACTCTGCTGGCCCGGCCCTCCCAGATAGGAGGCAAGAGGATGTGCGTGGCGTACAGGAAGGACGGACGCTGCAGGTTCGGGATCAAATGCAAGTTTGCCCATGACAGCGACCTCCAAAGCTCCATCATTCCCAATGACTATGACCCCCCTGCGGGTGACGATCCTGGATCGGACCAAGCTGACCCCAACGGGGGGGGATTTTCATACACGGGTCGCCAGAACTTTCACCAAAACCAGGGAGGAGACCCTGAAGAGGAGGGTCAGCAGTCTAGGAAGAGGAGAGTAGGGCTGAGTAACACCCTAGTGCCTCCTAAAAGGTCAATGAAGAATTATGCaatgcagaggaagagagaacaggtCAAATTGAACTGAGTGACTTGCAAAGGGATACTGTCAgcagcaatagtgtgtgtgtgtgtgtgtgtgtgtgtgtcctcacatCGTTTTAGTGTGTGACAGATAAAATGGGAATGTGTTCCAATTTCTGTACCCTTATTCTGCACTCATTTACTCCCCCTCATGGATGTAAAAGGAATGGACTGGTGTAAAATAGGGTTTAAACTTCTCCCTACCCATGATTACTTCACTGTAATGGAGTGCGCAAGTGCAACCTTCTGTTAGAAGAGAAGATAATCAGACCACAGCCAGAGAGCATTCATAGGATACCTATAGCACACTTCTAAACTTCTGTTCAGTCCAGTACATATACTTCAGATTGGTAGTTTCTACATGAAACGTTTTTTGTAGTTTCATTGAAAACGTATTCCTTTCTGTAAGAAACTGTCCATTGGAAATATAAGCTACAATTTATCATTGTTAAATAAATGCTTTAAATGTT

Function

NR:

description
uncharacterized protein LOC110497533

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573675.2 True 1486 mRNA 0.48 2 19594353 19598996

Neighbor

gene id symbol gene type direction distance location
LOC110498562 NA coding downstream 59143 19525106 ~ 19535210 (-)
LOC110497535 LOC106602669 coding downstream 70083 19517262 ~ 19524270 (-)
LOC118941546 NA coding downstream 173886 19397768 ~ 19420467 (-)
LOC118941463 NA coding downstream 217197 19374805 ~ 19377156 (-)
LOC110497474 NA coding downstream 225706 19364691 ~ 19368647 (-)
LOC110498685 LOC106602680 coding upstream 69263 19668259 ~ 19669604 (-)
LOC110497529 LOC100136072 coding upstream 132452 19666386 ~ 19751340 (-)
LOC110497528 LOC106609961 coding upstream 138911 19737907 ~ 19741020 (-)
doc2d LOC106609963 coding upstream 152813 19751809 ~ 19804307 (-)
LOC110498680 LOC106609964 coding upstream 242390 19841386 ~ 19866037 (-)
G1599735 NA non-coding downstream 10094 19583912 ~ 19584259 (-)
G1599705 NA non-coding downstream 55070 19539036 ~ 19539283 (-)
G1599703 NA non-coding downstream 56002 19538123 ~ 19538351 (-)
G1599220 NA non-coding downstream 152677 19441471 ~ 19441676 (-)
G1599216 NA non-coding downstream 153269 19435735 ~ 19441084 (-)
G1599749 NA non-coding upstream 17222 19616218 ~ 19616426 (-)
G1599750 NA non-coding upstream 20395 19619391 ~ 19622039 (-)
G1599752 NA non-coding upstream 27881 19626877 ~ 19627573 (-)
G1599753 NA non-coding upstream 29730 19628726 ~ 19629011 (-)
G1599755 NA non-coding upstream 33806 19632802 ~ 19633536 (-)
G1599717 NA other downstream 36996 19555597 ~ 19557357 (-)
G1599197 NA other downstream 212602 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 384389 19209292 ~ 19209964 (-)
G1598418 NA other downstream 829931 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1970877 17615897 ~ 17623476 (-)
G1599760 LOC106609957 other upstream 37022 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 39764 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 508919 20107915 ~ 20108791 (-)
G1600030 NA other upstream 528215 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2804520 22403516 ~ 22403837 (-)

Expression


Co-expression Network