LOC110497493 (LOC100194655)


Basic Information

Item Value
gene id LOC110497493
gene name LOC100194655
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22683830 ~ 22686430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573622.2
CGGGATGGGGGCGCTTCCTCCACTTGGAGGGGCGTTGGGTTTCTTTGAGGGTGTCTTGGTGAGGACTGTCTGGAACATTTAGGGTCTGACCTCTACTCCACGAGGAGGAACTTGAAAACATGTCGGACGCGGTGGTTAGCTTCATTAAGGACTTTTTGGCCGGTGGCATTGCTGCTGCCATCTCCAAGACAGCTGTTGCTCCAATTGAGAGAGTAAAGTTGTTGCTCCAGGTCCAACATGCCAGCCAACAAATCACAAAGGAAATGCAGTACAAAGGGATCATGGACTGCGTCAGGAGGATTCCCAAGGAGCAAGGCTTTATCTCCTTCTGGAGAGGCAACCTGGCCAATGTGATCCGTTACTTCCCCACCCAAGCCCTCAACTTTGCTTTCAAGGACAAGTACAAGAAGATCTTCCTTGGAGGAGTGGACCAGAAGACACAGTTCTGGCGTTGGTTCGCCGGTAACCTGGCATCTGGTGGCGCGGCGGGTGCCACCTCTCTTTGCTTCGTTTACCCACTTGACTTCGCCAGAACCAGGCTTGCGGCCGACATCGGAAAAAGCGGAGCCGAGAGAGAGTTCAGCGGTCTTGGCAGCTGTCTCAGCAAAATCTACAAAGCCGACGGTATCAAGGGTCTGTACCAGGGATTCAACGTGTCTGTCCAAGGCATCATCATCTACAGAGCTGCTTACTTCGGAGTCTACGACACAGCCAAGGGTATGCTGCCCGACCCCAAGAACACGCACATCTTCGTCAGCTGGATGATTGCCCAGAGCGTCACCGCAGCCGCCGGTATCATTTCATACCCCTTTGACACCGTCAGACGTCGTATGATGATGCAGTCAGGACGCAAATCAGCGGACATCATGTACACTGGCACAATCGACTGCTGGAAGAAGATCGCCAAGAACGAGGGAGGAAAAGCCTTCTTCAAGGGGGCCTGGTCCAACGTGATCCGAGGCATGGGCGGTGCCTTCGTCTTGGTGCTCTACGACGAGATCAAAAAGTACACATAAGCATTCACAACTCCCTAAGGAAACCCTTCACCACGTCTTAATTGTATCATATAATGATAACAGCTTGGGTGAATTATCGGGGTAGATGTGTATTCTATTGAGCCAGCCCAGGAGTTGGTTGCTAGTTATCCTTCTCGCCAGTGTATTTGGTCAAGTGAGCAACGCACCGACTCTGAAACCTGTATATATCTTACCCATGATGTACAAAAAAAACACCTCCAGGTTTACCAGTTGACTGTCAAACTGGTACAGAAACGTTTTTTTTCAATTGAATTACATGCCTACTGCAAACAGATTGCATCCACTTTTCTCAGTTCTTTCTCTCATAATAAGCAAAAGGAATGTACTCTTCACAGCAACTGCTGTCTACCAAGGACCTTATGTTCCTGTGTTGTGTATCTCATGTGTCCCACAATAAACATTATTTTAATAAGAATAAAGATGAAAAATACC

Function

NR:

description
solute carrier family 25-2

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573622.2 True 1469 mRNA 0.49 4 22683830 22686430

Neighbor

gene id symbol gene type direction distance location
LOC110497494 LOC106610031 coding upstream 68661 22613140 ~ 22615169 (+)
LOC110497497 primpol coding upstream 174564 22497979 ~ 22509266 (+)
LOC110497498 LOC106610000 coding upstream 221721 22423424 ~ 22462109 (+)
LOC110497499 LOC106610000 coding upstream 283015 22394506 ~ 22401330 (+)
LOC110497502 LOC106609999 coding upstream 302093 22365792 ~ 22381737 (+)
trnar-ucu-8 NA coding downstream 18274 22704704 ~ 22704795 (+)
LOC110497490 LOC106610008 coding downstream 72103 22758533 ~ 22773112 (+)
LOC110497489 LOC106610009 coding downstream 93015 22779445 ~ 22830551 (+)
LOC110497488 LOC106602733 coding downstream 152583 22839013 ~ 22841272 (+)
LOC110497483 LOC106610016 coding downstream 417719 23104149 ~ 23116038 (+)
G1602306 NA non-coding upstream 104197 22579392 ~ 22579633 (+)
G1602297 NA non-coding upstream 117763 22563093 ~ 22566067 (+)
G1602277 NA non-coding upstream 156987 22524095 ~ 22526843 (+)
G1602275 NA non-coding upstream 159973 22521999 ~ 22523857 (+)
G1602264 NA non-coding upstream 171659 22504997 ~ 22512171 (+)
G1602934 NA non-coding downstream 88333 22774763 ~ 22787472 (+)
G1603079 LOC106602736 non-coding downstream 253680 22940110 ~ 22944324 (+)
G1603125 NA non-coding downstream 323701 23010131 ~ 23010757 (+)
G1603360 NA non-coding downstream 338335 23024765 ~ 23024980 (+)
G1603385 NA non-coding downstream 375018 23061448 ~ 23066827 (+)
G1602216 NA other upstream 266281 22417202 ~ 22417549 (+)
G1602007 LOC106610024 other upstream 662831 22019067 ~ 22020999 (+)
G1601872 LOC106610027 other upstream 879940 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 907078 21763166 ~ 21784919 (+)
G1605451 sptlc2 other downstream 2164745 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3138054 25824484 ~ 25824826 (+)
LOC118941466 NA other downstream 3286915 25973345 ~ 26002713 (+)
LOC110497557 gcfc2 other downstream 3577859 26261361 ~ 26279307 (+)
G1607702 NA other downstream 4833533 27519963 ~ 27522078 (+)

Expression


Co-expression Network