LOC118941356 (LOC106610036)


Basic Information

Item Value
gene id LOC118941356
gene name LOC106610036
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 23079365 ~ 23080354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953811.1
ATGTGCTTGTTGAAATCAACTGGAGTATCCCTCATCCTGTCCATACTTCTATTCATCGCAGACTCTTACCCAAGCAGCGACAAGACAAACATGGGTTGTGAGGAATGCACACTGAAACCGAACACAATATTCCCCAACATCATgcagtgtacaggttgctgcttCTCCAGAGCTTATCCAACCCCACTACGGTCAAAGCAAACCATGCTGGTCCCCAAGAACATCACCTCTGAAGCCACATGCTGCGTTGCAAAAGAAGGGGAAAGGGTCACCACTAAGGATGGCTCACCTGTGACGAATCACACAGAGTGTCACTGCAGCACCTGTTATTACCATAAATCATAAACAGTCTGTAAGGGCTGGAAATCTCCTTGTCGTAGAAGCAAAAGGTTGGCAACAGATTATATATTTTGCCCTACTTATTACTGAAGTTCCTTGTGTTTTAAGAGAAATCCCATATTAGGAAATCATTGTGATCCACAAAAGGTAATATTCTGCGGATAATATTTATAGTGCTCTTATGGTTGCAATGATATAAAGCTGTATTCCTGTA

Function

NR:

description
PREDICTED: glycoprotein hormones alpha chain 2-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953811.1 True 553 mRNA 0.43 3 23079365 23080354

Neighbor

gene id symbol gene type direction distance location
LOC110498673 LOC106609991 coding downstream 23217 23029244 ~ 23056148 (-)
LOC110498560 LOC106610034 coding downstream 65549 23010861 ~ 23013816 (-)
LOC110497484 LOC106602736 coding downstream 130251 22937062 ~ 22949114 (-)
LOC110497486 myoz2 coding downstream 157090 22910464 ~ 22922275 (-)
LOC110497487 LOC106610012 coding downstream 172145 22849715 ~ 22907220 (-)
LOC110497482 LOC106610017 coding upstream 41154 23121508 ~ 23168994 (-)
LOC100305151 styx coding upstream 238847 23319201 ~ 23327595 (-)
LOC110497480 LOC106602906 coding upstream 268217 23348571 ~ 23357829 (-)
LOC110498671 bre coding upstream 343885 23424239 ~ 23567099 (-)
LOC110497537 LOC106602955 coding upstream 978018 24058372 ~ 24159732 (-)
G1603934 NA non-coding downstream 12646 23066419 ~ 23066719 (-)
G1603262 NA non-coding downstream 241261 22837715 ~ 22838104 (-)
G1603153 NA non-coding downstream 344534 22691584 ~ 22734831 (-)
G1603177 NA non-coding downstream 348255 22724326 ~ 22731110 (-)
G1602898 NA non-coding downstream 421201 22657936 ~ 22658164 (-)
G1604032 NA non-coding upstream 140854 23221208 ~ 23221477 (-)
G1604034 NA non-coding upstream 142516 23222870 ~ 23302771 (-)
G1604090 NA non-coding upstream 222173 23302527 ~ 23360584 (-)
G1604113 NA non-coding upstream 284866 23365220 ~ 23370434 (-)
G1604134 NA non-coding upstream 305491 23385845 ~ 23386180 (-)
G1602763 NA other downstream 663322 22415418 ~ 22416043 (-)
G1602753 NA other downstream 675528 22403516 ~ 22403837 (-)
G1600030 NA other downstream 2942804 20127211 ~ 20136561 (-)
G1600014 LOC106609977 other downstream 2970574 20107915 ~ 20108791 (-)
G1599758 LOC106609957 other downstream 3437362 19638760 ~ 19642003 (-)
G1604902 NA other upstream 893436 23973790 ~ 23974106 (-)
gpr137c LOC106602981 other upstream 1110344 24176332 ~ 24206622 (-)
LOC118941548 fabpl other upstream 1472184 24552373 ~ 24554024 (-)
LOC110497546 LOC106603015 other upstream 1730366 24792012 ~ 24844151 (-)

Expression


Co-expression Network