LOC100305151 (styx)


Basic Information

Item Value
gene id LOC100305151
gene name styx
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 23319201 ~ 23327595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573132.2
TAGCAAATCATGAACAATTTAGCTAACTTGCGAGCATACTCAAAAACAGCCCATAACATGAACAAATTACTCTAATAACATGTAATCGCACTCGCTAAATTGGACTTTTAGCTAAATGTAATCATGAATGAAGCATTTTTCAAATGTTTGTTTGCTAgtttgctaactagctaaccacaTATCGCCAGTCGAAAGAGTTCAGCTGGCTGTCCCATTGGCAAGTGTAGCTTATGCTCGCTACAATAACACATCCAGGACTGGGCGTATCcaatgagaagagagatgcagGAAATTCTACCAGGCCTGTTTTTAGGTCCATACTCAGCTGCTATGAAAAGCAAGCTTTCTGTCCTTGAAAGACAGGGGATAACGCACATGGTGTGTGTCCGCCAAGATATCGAGGCCAATTTTATAAAGCCCAACTTCCCACATAAATTTAGATACCTCGTTTTAGATATTGCTGACAATCCTGTGGAAAACATAATTAGATATTTCCCTATGATTAAAGAATTTATTGATGACTGTTTAGCCAGTGGAGGAAAGGTACTAGTTCATGGAAACGCAGGGATATCAAGAAGCGCTGCCTTAGTTATTGCATACCTTATGGAGACATTTGGCATAAAGTACAGGGATGCTTTCAGCCACGTTCAGGAGAGGAGATTCTGCATCAACCCTAACGTGGGCTTTGTGCATCAATTACAGGAATATGAAGCGATCTACTCAGCTAAACTAACTATCAAGATGATGTCACCAATACAGCTGGGCAGATCGTTCTCCCTGCATGCTGGAATGCCAGGCAGCCTGAAACGAAGCCTGGAAGAAGACGAGGACTTCGGGGGAATGCAGGTCACTGCTGCACAGAACGGATAGGTTTATTATGCAGATAGCAGTGTCTTTGCATACAGTGCActctttttttaaaaacatttttattgggattaaaaatgtaaatatttcAACTTTTCTAAAGGTGGGGGATTGGGTTCGCTTCCTGACGTCTGAGACCAAAGGGAGGGGGGTACAGTTTCATaagtgattattattttttgctgTATGCACTGTTTTTTGCAGTTTTATACTATTTAAAGCATTTTGCATTTTCAGCGGGACAGTATTGCAATAATGCACTTTTGATACTTGATTTGTTATTTCTCGCCAGAAGGTGGCAGTTGGCGTAAGGGACAGTAATAGAAAGTCAATGCCctatggagagatggaggccCACATTTGGGAGTGTTGGACAGAGATCAGGCTTAAAATGTGATGTTATTTAAAtgaaagggagagaaaaaagcTTGCCAGAGAATTAACGACCCACTGCTCAATAAACAGACGGCTAACATG
>XM_021573131.2
CGCAGCTAGCAAATCATGAACAATTTAGCTAACTTGCGAGCATACTCAAAAACAGCCCATAACATGAACAAATTACTCTAATAACATGTAATCGCACTCGCTAAATTGGACTTTTAGCTAAATGTAATCATGAATGAAGCATTTTTCAAATGTTTGTTTGCTAgtttgctaactagctaaccacaTATCGCCAGTCGAAAGAGTTCAGCTGGCTGTCCCATTGGCAAGTGTAGCTTATGCTCGCTACAATAACACATCCAGGACTGGGCGTATCcaatgagaagagagatgcagGAAATTCTACCAGGCCTGTTTTTAGGTCCATACTCAGCTGCTATGAAAAGCAAGCTTTCTGTCCTTGAAAGACAGGGGATAACGCACATGGTGTGTGTCCGCCAAGATATCGAGGCCAATTTTATAAAGCCCAACTTCCCACATAAATTTAGATACCTCGTTTTAGATATTGCTGACAATCCTGTGGAAAACATAATTAGATATTTCCCTATGaccaccatagtccctgtgcccaagaacactaagATTAAAGAATTTATTGATGACTGTTTAGCCAGTGGAGGAAAGGTACTAGTTCATGGAAACGCAGGGATATCAAGAAGCGCTGCCTTAGTTATTGCATACCTTATGGAGACATTTGGCATAAAGTACAGGGATGCTTTCAGCCACGTTCAGGAGAGGAGATTCTGCATCAACCCTAACGTGGGCTTTGTGCATCAATTACAGGAATATGAAGCGATCTACTCAGCTAAACTAACTATCAAGATGATGTCACCAATACAGCTGGGCAGATCGTTCTCCCTGCATGCTGGAATGCCAGGCAGCCTGAAACGAAGCCTGGAAGAAGACGAGGACTTCGGGGGAATGCAGGTCACTGCTGCACAGAACGGATAGGTTTATTATGCAGATAGCAGTGTCTTTGCATACAGTGCActctttttttaaaaacatttttattgggattaaaaatgtaaatatttcAACTTTTCTAAAGGTGGGGGATTGGGTTCGCTTCCTGACGTCTGAGACCAAAGGGAGGGGGGTACAGTTTCATaagtgattattattttttgctgTATGCACTGTTTTTTGCAGTTTTATACTATTTAAAGCATTTTGCATTTTCAGCGGGACAGTATTGCAATAATGCACTTTTGATACTTGATTTGTTATTTCTCGCCAGAAGGTGGCAGTTGGCGTAAGGGACAGTAATAGAAAGTCAATGCCctatggagagatggaggccCACATTTGGGAGTGTTGGACAGAGATCAGGCTTAAAATGTGATGTTATTTAAAtgaaagggagagaaaaaagcTTGCCAGAGAATTAACGACCCACTGCTCAATAAACAGACGGCTAACATG
>XM_021573129.2
GACATCTACGTAACTTTGGTCACGTGACTCCTCCGAGGGAGCAGCATGGTGGACATGAATACGCAACCTCAAAACAAACTCCTGCAATTATTCACTTAGCAAACCACGAAAACCGTGTGACAGGCCTAGGCCACGTCCGCCTGAGGTCACTGCAACATGGACGAGGATAATAAACTTCACTTCCCGTCCCTTCCTGCGTCAAAGGATGACCTAATGGACTGGGCGTATCcaatgagaagagagatgcagGAAATTCTACCAGGCCTGTTTTTAGGTCCATACTCAGCTGCTATGAAAAGCAAGCTTTCTGTCCTTGAAAGACAGGGGATAACGCACATGGTGTGTGTCCGCCAAGATATCGAGGCCAATTTTATAAAGCCCAACTTCCCACATAAATTTAGATACCTCGTTTTAGATATTGCTGACAATCCTGTGGAAAACATAATTAGATATTTCCCTATGaccaccatagtccctgtgcccaagaacactaagATTAAAGAATTTATTGATGACTGTTTAGCCAGTGGAGGAAAGGTACTAGTTCATGGAAACGCAGGGATATCAAGAAGCGCTGCCTTAGTTATTGCATACCTTATGGAGACATTTGGCATAAAGTACAGGGATGCTTTCAGCCACGTTCAGGAGAGGAGATTCTGCATCAACCCTAACGTGGGCTTTGTGCATCAATTACAGGAATATGAAGCGATCTACTCAGCTAAACTAACTATCAAGATGATGTCACCAATACAGCTGGGCAGATCGTTCTCCCTGCATGCTGGAATGCCAGGCAGCCTGAAACGAAGCCTGGAAGAAGACGAGGACTTCGGGGGAATGCAGGTCACTGCTGCACAGAACGGATAGGTTTATTATGCAGATAGCAGTGTCTTTGCATACAGTGCActctttttttaaaaacatttttattgggattaaaaatgtaaatatttcAACTTTTCTAAAGGTGGGGGATTGGGTTCGCTTCCTGACGTCTGAGACCAAAGGGAGGGGGGTACAGTTTCATaagtgattattattttttgctgTATGCACTGTTTTTTGCAGTTTTATACTATTTAAAGCATTTTGCATTTTCAGCGGGACAGTATTGCAATAATGCACTTTTGATACTTGATTTGTTATTTCTCGCCAGAAGGTGGCAGTTGGCGTAAGGGACAGTAATAGAAAGTCAATGCCctatggagagatggaggccCACATTTGGGAGTGTTGGACAGAGATCAGGCTTAAAATGTGATGTTATTTAAAtgaaagggagagaaaaaagcTTGCCAGAGAATTAACGACCCACTGCTCAATAAACAGACGGCTAACATG
>NM_001165055.1
ATGGACGAGGATAATAAACTTCACTTCCCGTCCCTTCCTGCGTCAAAGGATGACCTAATGGACTGGGCGTATCcaatgagaagagagatgcagGAAATTCTACCAGGCCTGTTTTTAGGTCCATACTCAGCTGCTATGAAAAGCAAGCTTTCTGTCCTTGAAAGACAGGGGATAACGCACATGGTGTGTGTCCGCCAAGATATCGAGGCCAATTTTATAAAGCCCAACTTCCCACATAAATTTAGATACCTCGTTTTAGATATTGCTGACAATCCTGTGGAAAACATAATTAGATATTTCCCTATGATTAAAGAATTTATTGATGACTGTTTAGCCAGTGGAGAGGAAAGGTACTAGTTCATGGAAACGCAGGGATATCAAGAAGCGCTGCCTTAGTTATTGCATACCTTATGGAGACATTTGGCATAAAGTACAGGGATGCTTTCAGCCACGTTCAGGAGAGGAGATTCTGCATCAACCCTAACGTGGGCTTTGTGCATCAATTACAGGAATATGAAGCGATCTACTCAGCTAAACTAACTATCAAGATGATGTCACCAATACAGCTGGGCAGATCGTTCTCCCTGCATGCTGGAATGCCAGGCAGCCTGAAACGAAGCCTGGAAGAAGACGAGGACTTCGGGGGAATGCAGGTCACTGCTGCACAGAACGGATAGGTTTATTATGCAGATAGCAGTGTCTTTGCATACAGTGCActctttttttaaaaacatttttattgggattaaaaatgtaaatatttcAACTTTTCTAAAGGTGGGGGATTGGGTTCGCTTCCTGACGTCTGAGACCAAAGGGAGGGGGGTACAGTTTCATaagtgattattattttttgctgTATGCACTGTTTTTTGCAGTTTTATACTATTTAAAGCATTTTGCATTTTCAGCGGGACAGTATTGCAATAATGCACTTTTGATACTTGATTTGTTATTTCTCGCCAGAAGGTGGCAGTTGGCGTAAGGGACAGTAATAGAAAGTCAATGCCctatggagagatggaggccCACATTTGGGAGTGTTGGACAGAGATCAGGCTTAAAATGTGATGTTATTTAAAtgaaagggagagaaaaaagcTTGCCAGAGAATTAACGACCCACTGCTCAATAAACAGACGGCT
>XM_021573130.2
GACATCTACGTAACTTTGGTCACGTGACTCCTCCGAGGGAGCAGCATGGTGGACATGAATACGCAACCTCAAAACAAACTCCTGCAATTATTCACTTAGCAAACCACGAAAACCGTGTGACAGGCCTAGGCCACGTCCGCCTGAGGTCACTGCAACATGGACGAGGATAATAAACTTCACTTCCCGTCCCTTCCTGCGTCAAAGGATGACCTAATGGACTGGGCGTATCcaatgagaagagagatgcagGAAATTCTACCAGGCCTGTTTTTAGGTCCATACTCAGCTGCTATGAAAAGCAAGCTTTCTGTCCTTGAAAGACAGGGGATAACGCACATGGTGTGTGTCCGCCAAGATATCGAGGCCAATTTTATAAAGCCCAACTTCCCACATAAATTTAGATACCTCGTTTTAGATATTGCTGACAATCCTGTGGAAAACATAATTAGATATTTCCCTATGATTAAAGAATTTATTGATGACTGTTTAGCCAGTGGAGGAAAGGTACTAGTTCATGGAAACGCAGGGATATCAAGAAGCGCTGCCTTAGTTATTGCATACCTTATGGAGACATTTGGCATAAAGTACAGGGATGCTTTCAGCCACGTTCAGGAGAGGAGATTCTGCATCAACCCTAACGTGGGCTTTGTGCATCAATTACAGGAATATGAAGCGATCTACTCAGCTAAACTAACTATCAAGATGATGTCACCAATACAGCTGGGCAGATCGTTCTCCCTGCATGCTGGAATGCCAGGCAGCCTGAAACGAAGCCTGGAAGAAGACGAGGACTTCGGGGGAATGCAGGTCACTGCTGCACAGAACGGATAGGTTTATTATGCAGATAGCAGTGTCTTTGCATACAGTGCActctttttttaaaaacatttttattgggattaaaaatgtaaatatttcAACTTTTCTAAAGGTGGGGGATTGGGTTCGCTTCCTGACGTCTGAGACCAAAGGGAGGGGGGTACAGTTTCATaagtgattattattttttgctgTATGCACTGTTTTTTGCAGTTTTATACTATTTAAAGCATTTTGCATTTTCAGCGGGACAGTATTGCAATAATGCACTTTTGATACTTGATTTGTTATTTCTCGCCAGAAGGTGGCAGTTGGCGTAAGGGACAGTAATAGAAAGTCAATGCCctatggagagatggaggccCACATTTGGGAGTGTTGGACAGAGATCAGGCTTAAAATGTGATGTTATTTAAAtgaaagggagagaaaaaagcTTGCCAGAGAATTAACGACCCACTGCT

Function

symbol description
styx Predicted to enable F-box domain binding activity. Predicted to be involved in negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process; negative regulation of protein binding activity; and regulation of ERK1 and ERK2 cascade. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human STYX (serine/threonine/tyrosine interacting protein).

NR:

description
serine/threonine/tyrosine-interacting protein isoform X2

GO:

id name namespace
GO:0007283 spermatogenesis biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K18042 STYX; serine/threonine/tyrosine-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573132.2 False 1344 mRNA 0.41 11 23319201 23327350
XM_021573131.2 False 1383 mRNA 0.41 12 23319201 23327356
XM_021573129.2 False 1338 mRNA 0.43 12 23319201 23327595
NM_001165055.1 False 1145 mRNA 0.42 11 23319207 23327439
XM_021573130.2 True 1283 mRNA 0.43 11 23319223 23327595

Neighbor

gene id symbol gene type direction distance location
LOC110497482 LOC106610017 coding downstream 150207 23121508 ~ 23168994 (-)
LOC118941356 LOC106610036 coding downstream 238847 23079365 ~ 23080354 (-)
LOC110498673 LOC106609991 coding downstream 263053 23029244 ~ 23056148 (-)
LOC110498560 LOC106610034 coding downstream 305385 23010861 ~ 23013816 (-)
LOC110497484 LOC106602736 coding downstream 370087 22937062 ~ 22949114 (-)
LOC110497480 LOC106602906 coding upstream 20976 23348571 ~ 23357829 (-)
LOC110498671 bre coding upstream 96644 23424239 ~ 23567099 (-)
LOC110497537 LOC106602955 coding upstream 730777 24058372 ~ 24159732 (-)
gpr137c LOC106602981 coding upstream 848737 24176332 ~ 24206622 (-)
LOC110497541 LOC106602991 coding upstream 989738 24317333 ~ 24345566 (-)
G1604034 NA non-coding downstream 16430 23222870 ~ 23302771 (-)
G1604032 NA non-coding downstream 97724 23221208 ~ 23221477 (-)
G1603934 NA non-coding downstream 252482 23066419 ~ 23066719 (-)
G1603262 NA non-coding downstream 481097 22837715 ~ 22838104 (-)
G1603153 NA non-coding downstream 584370 22691584 ~ 22734831 (-)
G1604113 NA non-coding upstream 37625 23365220 ~ 23370434 (-)
G1604134 NA non-coding upstream 58250 23385845 ~ 23386180 (-)
G1604135 NA non-coding upstream 59154 23386749 ~ 23387094 (-)
G1604136 NA non-coding upstream 60193 23387788 ~ 23403277 (-)
G1604394 NA non-coding upstream 431975 23759570 ~ 23804571 (-)
G1602763 NA other downstream 903158 22415418 ~ 22416043 (-)
G1602753 NA other downstream 915364 22403516 ~ 22403837 (-)
G1600030 NA other downstream 3182640 20127211 ~ 20136561 (-)
G1600014 LOC106609977 other downstream 3210410 20107915 ~ 20108791 (-)
G1604902 NA other upstream 646195 23973790 ~ 23974106 (-)
LOC118941548 fabpl other upstream 1224943 24552373 ~ 24554024 (-)
LOC110497546 LOC106603015 other upstream 1483125 24792012 ~ 24844151 (-)
sptlc2a sptlc2 other upstream 1524874 24847088 ~ 24908731 (-)

Expression


Co-expression Network