Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110498695 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 27131709 ~ 27139457 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: D-aspartate oxidase isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110498695 | True | 676 | mRNA | 0.57 | 4 | 27131709 | 27139457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shprh | shprh | coding | downstream | 219241 | 26887874 ~ 26912468 (-) |
| LOC110497584 | LOC106603407 | coding | downstream | 243969 | 26872950 ~ 26887740 (-) |
| fbxo30a | LOC106603398 | coding | downstream | 258889 | 26864882 ~ 26872820 (-) |
| LOC118941467 | LOC100194722 | coding | downstream | 286721 | 26842012 ~ 26844988 (-) |
| LOC110497578 | scml4 | coding | downstream | 323005 | 26791372 ~ 26808704 (-) |
| trnal-uaa-59 | NA | coding | upstream | 14161 | 27153618 ~ 27153700 (-) |
| LOC110497590 | stx11 | coding | upstream | 15675 | 27155132 ~ 27161015 (-) |
| LOC110497591 | LOC106603863 | coding | upstream | 29450 | 27168907 ~ 27173184 (-) |
| syne1b | LOC106603506 | coding | upstream | 73827 | 27213284 ~ 27350889 (-) |
| ahi1 | ahi1 | coding | upstream | 256393 | 27395850 ~ 27414739 (-) |
| G1608904 | NA | non-coding | downstream | 66232 | 27063727 ~ 27065477 (-) |
| G1608863 | NA | non-coding | downstream | 93934 | 27035302 ~ 27037775 (-) |
| G1608712 | NA | non-coding | downstream | 168410 | 26698692 ~ 26963299 (-) |
| G1608804 | LOC106603381 | non-coding | downstream | 274220 | 26856243 ~ 26857489 (-) |
| G1608763 | NA | non-coding | downstream | 364550 | 26766851 ~ 26767159 (-) |
| G1609001 | NA | non-coding | upstream | 92834 | 27232291 ~ 27291107 (-) |
| G1609062 | NA | non-coding | upstream | 245020 | 27384477 ~ 27387965 (-) |
| G1609081 | NA | non-coding | upstream | 278485 | 27417942 ~ 27418188 (-) |
| G1609082 | NA | non-coding | upstream | 278950 | 27418407 ~ 27418633 (-) |
| G1609103 | NA | non-coding | upstream | 332302 | 27471759 ~ 27472034 (-) |
| G1608844 | LOC106603413 | other | downstream | 190329 | 26937870 ~ 26941380 (-) |
| G1608576 | NA | other | downstream | 520726 | 26584938 ~ 26610983 (-) |
| G1608529 | NA | other | downstream | 704406 | 26424031 ~ 26427303 (-) |
| ston2 | ston2 | other | downstream | 1298332 | 25825790 ~ 25876073 (-) |
| G1608988 | LOC106603498 | other | upstream | 56291 | 27195748 ~ 27201735 (-) |
| G1608992 | NA | other | upstream | 66773 | 27206230 ~ 27207354 (-) |
| nkx2.9 | nkx2-8 | other | upstream | 739004 | 27877963 ~ 27879920 (-) |
| plekhh1 | LOC106602716 | other | upstream | 1097139 | 28205649 ~ 28269202 (-) |
| crip1 | crip1 | other | upstream | 1502831 | 28642288 ~ 28650251 (-) |
