zbtb24 (zbtb24)


Basic Information

Item Value
gene id zbtb24
gene name zbtb24
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 27141390 ~ 27149328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573779.2
tttattaaatgtgcAAAGACCTTTAGGTTATACATTAATGTGAGTATGATCAAATGAAAATCCATATCAAAACAATAGGTCAGTGTTCCAGACATCCCTATGTTGGCTAAAGGTTAAGGATAAGTGGGTTGGTTAAGATATAAAATATGCTATTTGTAAAACCACAGCCCCTCCACTTGACTCAATTAAGTGCACAACATTCAAATATTAATTTTAAAGCATGTTAATGTACAGATAAAACACTTATTTGCCCATAGTCTTATGATCCATAACATAACTTCTCCAGAAAATTGTTGACCTATCTGCAGGCTGTGCGAGGTTATCAACTCATGTATTACTCTGTATAATGAACACCCGAATCATTGCATAGAATTGCTGCTCTTATACGCCTCTGGTGGGACGCTCTGACAGTGCAGGGGGAAAGTCCTGAAAAGAAACCAGAGATCCTATTTTTagttttgaagcatttattttgttgATCCAAAAAATCTGTTAAATAACGCTAGGATACTGACCAATGATTTATATGTACATCATTGATACTGGAAGAAAGTCTCACAAGCTTTTTCCAGTTGACCTTTGTCAGACAACAGGCATAGAGTCTGGAGATCGATAAAGATTCGCCTCAACAACATGTGTAATAATCATGTGAAAGATTCGACCACGGAGGTATAATAATGACTATTTGACTCCCATTAACAAACGTTTTATTGATCCTGGCCATAGATATAACAACACCGTGGATAGATTAATGCAGTGAAAAATTATACCAACCAAAGCTTATAAAGATCGTGGATTCAAACTGCGAGAAACATGAAACACCCGTGAACAACCTCCACATCTCGCGATAATCTGAGTAACTGCGAAGAAGAGACGGTGGTGAGGTTTGGTTAGAATCATACTTCACAATCCATCCTCAAGAAAATGTCTGAGAAGACCCTAATCACACCCACCTCCCACACAGCCATTCATTCAACAACACACAAGGATACCATCCTCTGCAAATTTGACAAGCTGAGAAAGCGAGAGCTTCTGTGTGACATCACCCTTATCGTAGAAGATGTGCACTTCAAAGCACATAAGGCCCTGTTGGCCGCCAGCAGTGACTACTTCTCCCTCATGTTCACTGCTGAGGAGCAGATCAGCCAGTCGACCTACAGGCTGGACGGCATGGCGGCGGAGACCTTTGGAGCTGTACTAGAGTTCATCTACAGTGCCCAGGTATCTGTGGAGGAGAGTGTTACCGAGCAGCTACTAGACCTGGCCAGACTCCTAGAGGTTAGTGACCTTGTGAAAGCTCACGCGGACCATAACCTGAACATTACCTATCCAGGTGTAGAGGGGAGGGGCCTTAGTAACATCACCTGTCCTGGTTTCGAGGTGAGACCGAAAGTGAACACAGACAGCGGAGAAGGTAAAGGACTGGGAGAAGGGACATCGTCAGCGATGCAGCCGAAACGGAAAAGAGGTCGTCCCAGGAAGAATGAAGTGGACATGTCGGTGAAGCCGTTGGAAGAGTCCAATAAACAGGAAGTAAGAAGTGATATCATCAATATCCAGGATGCAGCCAATGAAAAACAGCAGGTTACAGTCGATGGTGTCACAGTAGACTGTGTAGACCCTGAAGAATGTCTGGTTGAGTCACATGATAAACTGGATTCTCCAATAAGAGACTCTGATGATGCAGActatgatcctagatcagcccgtACTAGGCGGCAGAGTAAGAGGAAGATCAGACCGCCGGTGAAATTTAAGGGCTACAGGGTGGGTGACCGGGACGACACTACGTCTGAATGCAGAGAACCAGGGAAGAGGGGCAGGAAGAGAAAATACCCCAACACAGAGGCACGGTGTGAAGACTGTGGGAAAGTGTTCAAAAACCACCTGTTCTTAAAGATACATCAAAGGACTCATACAGGTGAAAAGCCTTTCAAGTGTTTTgcgtgtgggaagagtttcacacAGAAGCACACCCTCCTGGTTCACCAGCGGatgcacactggagagaaacccttCGTCTGTACCGTCTGCTCGAAAGCCCTGTCCACCAAACACTCACTAGTGGATCACATGAACTTACACACAGAGGAGAAAACATTCAGCTGTGACAAATGTGAAAAGACGTTCAGCCAGAAGAGACAACTAAAGAGCCATCACAGGGTCCATACGGGTAAATCTTTACCAGAATGTGCGCACTGTCAACGTAGGTTCATGGATGCAGCTCAGCTGAAGAAGCACATGAGAACTCACACAGGTGAGAAGCCTTTCACTTGTGAGATCTGTGGAAAGTGTTTTACAGCCAAGAGCACACTGCAGACGCACATCAGAATTCACAGAGGAGAGAAGCCATATGTCTGCAACGTCTGCAACAAGTCATTCTCTGATGCCAGTGCCAGGCGCCGTCACGTCGCCTCCCATACCGGAAAGAAGCCATTCACCTGCTCCTTTTGCAACCTGTCCTTCGCTCGCCTGGACAACTTGAAGACCCACACCAAAACCCACAACAAGGAGAGCGTAGTCACCATCACCACCGAGGAGACCCAGTGCGGGGCTGGGGTGGTGGAAGAGGAGGCTGGGGCAACGGAGGAGGTACGGAGCATCCTACAGCTCCAGCAATACCAGCTACCTGGTCACCCAGAGCAGGAGATACAGCTGGTTGTGACTGGAGATGTGGATAATCTCAACAACCTCAACTTTGTGCCCAGTCACTGTGGGCATGATCAGGGCATCAGCATTATTACCACAACAGAGGGTGGGGTCTCTGAGGCGGCAGACCAGGTCCACTCCAGACTGACCCTCCTCACCCAGCCGTCAGGACACATGCAAAACGTGGCCTTGGTCACGCAGGGCAGCGTGGACCATCACAACCAGCAGATCCAGACTATCAGCGTGCTGCAGGACGGACACATGACCAACGGGGTTGGGGTCGCAGGGCAGCCTGAACAGATGCATGTCATCACGCTATCCAAGGAGGACATGGAGCACCTTCAGGCCCACCATGGGCCGCCCCAGCCCCTGCACATAGCACCCAGGCCTGGCTCCCTCCCTGGCCCTGGCTCTGTACAGCAGCTCCACGTCAtgcaccagcagcagcagcaccagaCCCTCTCTCAGCTGGCTGTGACCCAGGACCAGAGCACCATACTGGGGCAGATGAGCAGAGAGCAGCAGGGTCAGGCCCAGGCTATCCACATCAACAGCCAGAGCAGCCAGCCCATCTCAATCAGTCAGACCAGTGAACAGATCCCAAGCCACCATATCCAGGGCCAGACCTTCCAGATACAGGCTGGTACTGTCTCCTACCTCTACACCACCAGCCTAGCCCCGCCATAGGCCCGGCACAACTGACTGAAGGACTGGAGAATCAATCTGCCCTAACAGAACTGACTGAATGGGCGGGAACTGTCTCCTAGCTCTACACCACCAGTCTAGCCCAGCCATAGCCCTGATACATGGCCGTAGACGCCGCAAAGGAGTCAACAGCCATGTGTCAGGACCAGCCCAGCCATAGACTGTATGTGCACAGCAGAATTGACTGAGGAACCAGTCTGGCCCAACACATTTGACTTTGCCTTAGTTCACACTCAGGTTGGACAATGGATGTAAAAATGCATTTGTCACAATGGTTGTAAATTGAATTTAGTTAGCTATGCCAGGATATTGAAATGACACAGAGGTAGAGAAAATGTGATTCCAACTAGGTTATTCTGTGTGACACTGACATCTTCTGGCTGACGTGATGTAAAAGCTCTGAGCCAATAGCTATTCTTTCAGGCTACAATAAAAGGGTTATTTCGAAGCAGGTAAAAGCCATTATTTGCATGTCAAGTCacaatgtaatttttttttaaaatttttaaatGCATATTTATATTGTGAGGTGGAACAAATGTATTGTTTATATTATGAAGGTAACATACTGCCATTTGTGGTGCTGCAAGAGCAAGGCGAGAGTCGAAAGTATTGATGAGGCGAGGGATATTGTTGGTGTCTGCGTGCTACTGAAGTGCTGTGGCCCTGTGTGCTCTTTCGTTAGTtttgtttttattcatttatttctgGTACCCTCCTACCTGCGAGGAATGAGGCCTGTGTGGTGTTGCACAGTTAAAATTGCAAACCCACATGCTGTAAGTCCTCTGCTCTACCTAAGTGTTTTAATGGGCTGCTTGTGGGTAATActaatacagaaataaccattgtACATGTATTTTTCTCCTCTTTACTGCTTTAAGGCTTTTTATGCCATTGTTTACCACTTCAGTGTCCTTAAATCTGTAGTTTTGAAGCATATAAAACATTTTGTTCCACTATTAAATATCACACAATACTTTA
>XM_021573780.2
tttattaaatgtgcAAAGACCTTTAGGTTATACATTAATGTGAGTATGATCAAATGAAAATCCATATCAAAACAATAGGTCAGTGTTCCAGACATCCCTATGTTGGCTAAAGGTTAAGGATAAGTGGGTTGGTTAAGATATAAAATATGCTATTTGTAAAACCACAGCCCCTCCACTTGACTCAATTAAGTGCACAACATTCAAATATTAATTTTAAAGCATGTTAATGTACAGATAAAACACTTATTTGCCCATAGTCTTATGATCCATAACATAACTTCTCCAGAAAATTGTTGACCTATCTGCAGGCTGTGCGAGGTTATCAACTCATGTATTACTCTGTATAATGAACACCCGAATCATTGCATAGAATTGCTGCTCTTATACGCCTCTGGTGGGACGCTCTGACAGTGCAGGGGGAAAGTCCTGAAAAGAAACCAGAGATCCTATTTTTagttttgaagcatttattttgttgATCCAAAAAATCTGTTAAATAACGCTAGGATACTGACCAATGATTTATATGTACATCATTGATACTGGAAGAAAGTCTCACAAGCTTTTTCCAGTTGACCTTTGTCAGACAACAGGCATAGAGTCTGGAGATCGATAAAGATTCGCCTCAACAACATGTGTAATAATCATGTGAAAGATTCGACCACGGAGGTATAATAATGACTATTTGACTCCCATTAACAAACGTTTTATTGATCCTGGCCATAGATATAACAACACCGTGGATAGATTAATGCAGTGAAAAATTATACCAACCAAAGCTTATAAAGATCGTGGATTCAAACTGCGAGAAACATGAAACACCCGTGAACAACCTCCACATCTCGCGATAATCTGAGTAACTGCGAAGAAGAGACGGTAAGGTCCTGAAAGCTTGATATCTTTTTTAAGGCATTGCAGTGTTTGCAGCAATCCTAGAAATGCTGAGAAAGTTTCTTCGTCTCTTTATTGAACATTGTTCTTTTGTTTAGATTTTGGGTTCCACTTGCAGTGCATTCATTGTGTATAATGTAGAAAGCTTTACATGGCGCCCGCCGGTGTTGTGTCGCTGTTTTGAAACGATGCAAAAATGTATGCGCACACTTCCCTGTGACTTAGTGACCAGTGATCGCTAAATTGCTCTGTCTTATGGCTCTTCAACAGTTCTTACTAAGGTTTCAAACAGCTGTTGATCGACAAAATGTATATGTGTGAAATatcgcaacaacaaaaaagagagAAATATTTTCTATAGTGAGAGCCTGGAGCACTCATTGTTCTGTAGGCTGCAGTAGCAAATTCTGTGTCAAGTCAAGAGCCCTGAAAAGTTCAAATTAAATGGATGGGCTATAGGTGGTGAGGTTTGGTTAGAATCATACTTCACAATCCATCCTCAAGAAAATGTCTGAGAAGACCCTAATCACACCCACCTCCCACACAGCCATTCATTCAACAACACACAAGGATACCATCCTCTGCAAATTTGACAAGCTGAGAAAGCGAGAGCTTCTGTGTGACATCACCCTTATCGTAGAAGATGTGCACTTCAAAGCACATAAGGCCCTGTTGGCCGCCAGCAGTGACTACTTCTCCCTCATGTTCACTGCTGAGGAGCAGATCAGCCAGTCGACCTACAGGCTGGACGGCATGGCGGCGGAGACCTTTGGAGCTGTACTAGAGTTCATCTACAGTGCCCAGGTATCTGTGGAGGAGAGTGTTACCGAGCAGCTACTAGACCTGGCCAGACTCCTAGAGGTTAGTGACCTTGTGAAAGCTCACGCGGACCATAACCTGAACATTACCTATCCAGGTGTAGAGGGGAGGGGCCTTAGTAACATCACCTGTCCTGGTTTCGAGGTGAGACCGAAAGTGAACACAGACAGCGGAGAAGGTAAAGGACTGGGAGAAGGGACATCGTCAGCGATGCAGCCGAAACGGAAAAGAGGTCGTCCCAGGAAGAATGAAGTGGACATGTCGGTGAAGCCGTTGGAAGAGTCCAATAAACAGGAAGTAAGAAGTGATATCATCAATATCCAGGATGCAGCCAATGAAAAACAGCAGGTTACAGTCGATGGTGTCACAGTAGACTGTGTAGACCCTGAAGAATGTCTGGTTGAGTCACATGATAAACTGGATTCTCCAATAAGAGACTCTGATGATGCAGActatgatcctagatcagcccgtACTAGGCGGCAGAGTAAGAGGAAGATCAGACCGCCGGTGAAATTTAAGGGCTACAGGGTGGGTGACCGGGACGACACTACGTCTGAATGCAGAGAACCAGGGAAGAGGGGCAGGAAGAGAAAATACCCCAACACAGAGGCACGGTGTGAAGACTGTGGGAAAGTGTTCAAAAACCACCTGTTCTTAAAGATACATCAAAGGACTCATACAGGTGAAAAGCCTTTCAAGTGTTTTgcgtgtgggaagagtttcacacAGAAGCACACCCTCCTGGTTCACCAGCGGatgcacactggagagaaacccttCGTCTGTACCGTCTGCTCGAAAGCCCTGTCCACCAAACACTCACTAGTGGATCACATGAACTTACACACAGAGGAGAAAACATTCAGCTGTGACAAATGTGAAAAGACGTTCAGCCAGAAGAGACAACTAAAGAGCCATCACAGGGTCCATACGGGTAAATCTTTACCAGAATGTGCGCACTGTCAACGTAGGTTCATGGATGCAGCTCAGCTGAAGAAGCACATGAGAACTCACACAGGTGAGAAGCCTTTCACTTGTGAGATCTGTGGAAAGTGTTTTACAGCCAAGAGCACACTGCAGACGCACATCAGAATTCACAGAGGAGAGAAGCCATATGTCTGCAACGTCTGCAACAAGTCATTCTCTGATGCCAGTGCCAGGCGCCGTCACGTCGCCTCCCATACCGGAAAGAAGCCATTCACCTGCTCCTTTTGCAACCTGTCCTTCGCTCGCCTGGACAACTTGAAGACCCACACCAAAACCCACAACAAGGAGAGCGTAGTCACCATCACCACCGAGGAGACCCAGTGCGGGGCTGGGGTGGTGGAAGAGGAGGCTGGGGCAACGGAGGAGGTACGGAGCATCCTACAGCTCCAGCAATACCAGCTACCTGGTCACCCAGAGCAGGAGATACAGCTGGTTGTGACTGGAGATGTGGATAATCTCAACAACCTCAACTTTGTGCCCAGTCACTGTGGGCATGATCAGGGCATCAGCATTATTACCACAACAGAGGGTGGGGTCTCTGAGGCGGCAGACCAGGTCCACTCCAGACTGACCCTCCTCACCCAGCCGTCAGGACACATGCAAAACGTGGCCTTGGTCACGCAGGGCAGCGTGGACCATCACAACCAGCAGATCCAGACTATCAGCGTGCTGCAGGACGGACACATGACCAACGGGGTTGGGGTCGCAGGGCAGCCTGAACAGATGCATGTCATCACGCTATCCAAGGAGGACATGGAGCACCTTCAGGCCCACCATGGGCCGCCCCAGCCCCTGCACATAGCACCCAGGCCTGGCTCCCTCCCTGGCCCTGGCTCTGTACAGCAGCTCCACGTCAtgcaccagcagcagcagcaccagaCCCTCTCTCAGCTGGCTGTGACCCAGGACCAGAGCACCATACTGGGGCAGATGAGCAGAGAGCAGCAGGGTCAGGCCCAGGCTATCCACATCAACAGCCAGAGCAGCCAGCCCATCTCAATCAGTCAGACCAGTGAACAGATCCCAAGCCACCATATCCAGGGCCAGACCTTCCAGATACAGGCTGGTACTGTCTCCTACCTCTACACCACCAGCCTAGCCCCGCCATAGGCCCGGCACAACTGACTGAAGGACTGGAGAATCAATCTGCCCTAACAGAACTGACTGAATGGGCGGGAACTGTCTCCTAGCTCTACACCACCAGTCTAGCCCAGCCATAGCCCTGATACATGGCCGTAGACGCCGCAAAGGAGTCAACAGCCATGTGTCAGGACCAGCCCAGCCATAGACTGTATGTGCACAGCAGAATTGACTGAGGAACCAGTCTGGCCCAACACATTTGACTTTGCCTTAGTTCACACTCAGGTTGGACAATGGATGTAAAAATGCATTTGTCACAATGGTTGTAAATTGAATTTAGTTAGCTATGCCAGGATATTGAAATGACACAGAGGTAGAGAAAATGTGATTCCAACTAGGTTATTCTGTGTGACACTGACATCTTCTGGCTGACGTGATGTAAAAGCTCTGAGCCAATAGCTATTCTTTCAGGCTACAATAAAAGGGTTATTTCGAAGCAGGTAAAAGCCATTATTTGCATGTCAAGTCacaatgtaatttttttttaaaatttttaaatGCATATTTATATTGTGAGGTGGAACAAATGTATTGTTTATATTATGAAGGTAACATACTGCCATTTGTGGTGCTGCAAGAGCAAGGCGAGAGTCGAAAGTATTGATGAGGCGAGGGATATTGTTGGTGTCTGCGTGCTACTGAAGTGCTGTGGCCCTGTGTGCTCTTTCGTTAGTtttgtttttattcatttatttctgGTACCCTCCTACCTGCGAGGAATGAGGCCTGTGTGGTGTTGCACAGTTAAAATTGCAAACCCACATGCTGTAAGTCCTCTGCTCTACCTAAGTGTTTTAATGGGCTGCTTGTGGGTAATActaatacagaaataaccattgtACATGTATTTTTCTCCTCTTTACTGCTTTAAGGCTTTTTATGCCATTGTTTACCACTTCAGTGTCCTTAAATCTGTAGTTTTGAAGCATATAAAACATTTTGTTCCACTATTAAATATCACACAATACTTTA

Function

symbol description
zbtb24 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Used to study immunodeficiency-centromeric instability-facial anomalies syndrome. Human ortholog(s) of this gene implicated in immunodeficiency-centromeric instability-facial anomalies syndrome 2. Orthologous to human ZBTB24 (zinc finger and BTB domain containing 24).

NR:

description
zinc finger and BTB domain-containing protein 24

GO: NA

KEGG:

id description
K10503 ZBTB24, BIF1; zinc finger and BTB domain-containing protein 24

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573779.2 False 4338 mRNA 0.47 9 27141390 27149328
XM_021573780.2 True 4812 mRNA 0.46 9 27141390 27149328
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497587 NA coding upstream 10735 27040261 ~ 27130655 (+)
LOC110497586 LOC106603443 coding upstream 103422 26983440 ~ 27037968 (+)
LOC110498694 LOC106603854 coding upstream 195269 26941566 ~ 26946121 (+)
grm1b LOC106603413 coding upstream 199963 26914045 ~ 26941427 (+)
si:ch73-242m19.1 LOC106603381 coding upstream 275660 26836810 ~ 26865730 (+)
ccdc170 ccdc170 coding downstream 39908 27189236 ~ 27213130 (+)
myct1b myct1 coding downstream 221608 27370936 ~ 27372858 (+)
LOC110497595 LOC107653590 coding downstream 224619 27373947 ~ 27387979 (+)
LOC110497596 LOC106603871 coding downstream 239127 27388455 ~ 27393634 (+)
LOC118941357 NA coding downstream 267304 27416632 ~ 27423405 (+)
G1607401 NA non-coding upstream 43684 27057011 ~ 27097706 (+)
G1607361 NA non-coding upstream 117055 26946138 ~ 27024335 (+)
G1607339 NA non-coding upstream 231879 26908313 ~ 26909511 (+)
G1607319 shprh non-coding upstream 248202 26892603 ~ 26893188 (+)
G1607452 stx11 non-coding downstream 5096 27154424 ~ 27158501 (+)
G1607487 LOC106603506 non-coding downstream 80322 27229650 ~ 27234104 (+)
G1607617 NA non-coding downstream 246884 27396212 ~ 27396490 (+)
G1607639 NA non-coding downstream 268561 27417889 ~ 27418167 (+)
LOC110497557 gcfc2 other upstream 862083 26261361 ~ 26279307 (+)
LOC118941466 NA other upstream 1138852 25973345 ~ 26002713 (+)
G1606716 NA other upstream 1316564 25824484 ~ 25824826 (+)
G1605451 sptlc2 other upstream 2287453 24851175 ~ 24853937 (+)
LOC110497498 LOC106610000 other upstream 4679768 22423424 ~ 22462109 (+)
G1607702 NA other downstream 370635 27519963 ~ 27522078 (+)
G1607901 NA other downstream 714795 27864123 ~ 27864595 (+)
G1609741 NA other downstream 1493005 28642333 ~ 28646521 (+)
cdan1 cdan1 other downstream 1647064 28796261 ~ 28816106 (+)
G1610576 NA other downstream 2210950 29360278 ~ 29360735 (+)

Expression

zbtb24(zbtb24) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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zbtb24(zbtb24) Expression in each Bioproject

Bar chart with 21 bars.
zbtb24(zbtb24) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network