si:dkey-288a3.2 (LOC106601776)


Basic Information

Item Value
gene id si:dkey-288a3.2
gene name LOC106601776
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 30911393 ~ 30988951 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954637.1
ATGTGACGTTGATGCAGGTGCTCATGctgaggaggagatgaaggaggaTAAAGGagaagagcagcagcagcagcacatcTACATTCAAAAGTATAAACATTTGATAGGTTTAGCAAAGTTAGTAGAGATTGCAGGCAGTGAGAATATCAAAATGAGAAGTCGATCATTCTAAatttgtatgatatatattatatattgtgtAGTTATCAATTATATTGTAACCTATTTTATACAAGTTTAACTGAATTATTATTGTACTTGTTGCTGGCCATTTGATAGTTTTAGAAAATATTGGGTTTCACTTGCATCACATGGCATGGCTCATGAATAAGATATGGGCACATGAGTAGCCCTATCTTGTTTCTAGCCTGAGCATCTCCCTGGAAGTGTTGCACTGGAAACCTAAACTTTGGGAGAGTTTGAATCCTGTTGCCACTAGACGAGGAGTTTATTCAATGCCATCGCTTTTATAACAAAACGTGTAGTTTGATGACCTGTGAGCTACGACTGTATAAAACAAGAATGGCCCTTGAGATGTCCAACGATAAACGGATAAAACTCGGAGCGCTCTGGTGACTCGAATCCAATTGCGCCCCTATCCAAAAAATATCCTCCCCAACTGGGAGATTCATACTGGACGTTTGGAAGCGGAACGAACGATGACTAGACGCAGTGACAGCGATAATGACGGAGAGACTTCATCCCCGTCTCCGTCCTGGCGCCCAAAGAAATGTAAAGGTGAAAAGCATGTGTCTTTCCCTCCGGATGAGGAGATAGTGTCAGGCTTCGCTGAGCGCAAGGACACGATCAATGTTGACAGCCTCACCTTGGCAGAGGTAATTGAGGCCTACAAGAGGAGCTGCGACAGGCACCAGGTGGAACCTAAACCCAAGATTCTGGAACAACTTGAGcAGGTTACCAGTTTAAATGGCAGGGCCCCATGTCTGGATTTGAAAGGTGAGCGATTAGACCACCTTTCCTGCGAGGCTCTGGAAGTCATACTGAAATCACTGAGCTTTGATTTCATCAATCTGCAAGCGGCAGAGCTGGAGGAAAATgGAGCATCATCCTTGCTGGATATGATTTTGTATTATGAATCTACCCCCCATCTTGACATCTCTGACAACACCGGCATGGGGATATCTGGTTGGAAGGCCCTCTCTCATTTGATAAAgcagagtgtgtgtctgttGAGGCTGGATGTGTGTAACGTGGCCCTGCTACAGTATCCAGCCCAGGTCCTGTCAAGAGCCCTCCTAAGCAGCAGACTCACCGTGCTGCACCTCCAAAGCACCTGCCTCAGTGGCAGACCCCTCTTCACGCTTGTGGCTGCTCTGAAGAGCAACAGAGCGCTCCGGGAGCTGTACCTGTCCAACAATAATCTGAACAGCGAACAGGACTCTATGCAGTTAGGAGACCTGCTCAGATACAACAGCTCAATCACTACTCTGGACCTCAGCAACAACACCATAGCAAACTCAGGACTGGAGGAGATCTGTGAAGGTCTGAGAGTTCAGACAGATGGACTGAAGATTCTGATTCTATGGAACAACCAGATCACTAACAATGGACTGGTCCATCTAGCCAAAGTTCTGCCTGTCCTAAAGACTCTGGAGACATTGAACCTGGGGGAGAATAACCTGCAGAACAGAGGTATCCACACACTGAGGGAATCTCTGATGATGAACCACTCACTTTTGCAGCTaggcctggaacacacacacttcacttgTGAAGgtgctgtAGCTTTGGCTGAGTTCCTAGCTGAGAGCCGTCAGATCCAGCGCCTGGACGTGCGTGAGAACGAAGTCAGGGCTGGAGGTCTCATGGCCCTCTCTCTGGCCTTACGAATCAACCACAGCCTCACCTCACTAGACCTGGACCACACACCCAAACAGGAACAGGTACATCAGTCTCAAGCAGAGCTGAGGAGAACAATGCTGCCACAACTTAAATATGAGTACTTTAATCCACAGTCGTTAGTTGGTCATGTTAAAGTTCACAATTGGAAGTCAGATAAAGACAACTAAAAAGTAATCCATGGTGGTATGTCAGTGTTGCCTttttctcctctgtgtgtgtctgtgaaggcCTGAGGAGAACTATTCTGCCACTACCTTAATACAGGCCCCTGCTGGATTCACAAAATAATTACCCACACTTGCCATCTGTTTGTCATGATTTTATCTCAGCTAACTTATTTGCATATTAAAGCATTAATTAAAATCTCCAAGGAACGGAATTCTTACTTTAAAATTAACTCCAATGGCTTCGTGTG
>XM_036954638.1
ATGTGACGTTGATGCAGGTGCTCATGctgaggaggagatgaaggaggaTAAAGGagaagagcagcagcagcagcacatcTACATTCAAAAGTATAAACATTTGATAGGTTTAGCAAAGTTAGTAGAGATTGCAGGCAGTGAGAATATCAAAATGAGAAGTCGATCATTCTAAatttgtatgatatatattatatattgtgtAGTTATCAATTATATTGTAACCTATTTTATACAAGTTTAACTGAATTATTATTGTACTTGTTGCTGGCCATTTGATAGTTTTAGAAAATATTGGGTTTCACTTGCATCACATGGCATGGCTCATGAATAAGATATGGGCACATGAGTAGCCCTATCTTGTTTCTAGCCTGAGCATCTCCCTGGAAGTGTTGCACTGGAAACCTAAACTTTGGGAGAGTTTGAATCCTGTTGCCACTAGACGAGGAGTTTATTCAATGCCATCGCTTTTATAACAAAACGTGTAGTTTGATGACCTGTGAGCTACGACTGTATAAAACAAGAATGGCCCTTGAGATGTCCAACGATAAACGGATAAAACTCGGAGCGCTCTGGTGACTCGAATCCAATTGCGCCCCTATCCAAAAAATATCCTCCCCAACTGGGAGATTCATACTGGACGTTTGGAAGCGGAACGAACGATGACTAGACGCAGTGACAGCGATAATGACGGAGAGACTTCATCCCCGTCTCCGTCCTGGCGCCCAAAGAAATGTAAAGGTGAAAAGCATGTGTCTTTCCCTCCGGATGAGGAGATAGTGTCAGGCTTCGCTGAGCGCAAGGACACGATCAATGTTGACAGCCTCACCTTGGCAGAGGTAATTGAGGCCTACAAGAGGAGCTGCGACAGGCACCAGGTGGAACCTAAACCCAAGATTCTGGAACAACTTGAGGTTACCAGTTTAAATGGCAGGGCCCCATGTCTGGATTTGAAAGGTGAGCGATTAGACCACCTTTCCTGCGAGGCTCTGGAAGTCATACTGAAATCACTGAGCTTTGATTTCATCAATCTGCAAGCGGCAGAGCTGGAGGAAAATgGAGCATCATCCTTGCTGGATATGATTTTGTATTATGAATCTACCCCCCATCTTGACATCTCTGACAACACCGGCATGGGGATATCTGGTTGGAAGGCCCTCTCTCATTTGATAAAgcagagtgtgtgtctgttGAGGCTGGATGTGTGTAACGTGGCCCTGCTACAGTATCCAGCCCAGGTCCTGTCAAGAGCCCTCCTAAGCAGCAGACTCACCGTGCTGCACCTCCAAAGCACCTGCCTCAGTGGCAGACCCCTCTTCACGCTTGTGGCTGCTCTGAAGAGCAACAGAGCGCTCCGGGAGCTGTACCTGTCCAACAATAATCTGAACAGCGAACAGGACTCTATGCAGTTAGGAGACCTGCTCAGATACAACAGCTCAATCACTACTCTGGACCTCAGCAACAACACCATAGCAAACTCAGGACTGGAGGAGATCTGTGAAGGTCTGAGAGTTCAGACAGATGGACTGAAGATTCTGATTCTATGGAACAACCAGATCACTAACAATGGACTGGTCCATCTAGCCAAAGTTCTGCCTGTCCTAAAGACTCTGGAGACATTGAACCTGGGGGAGAATAACCTGCAGAACAGAGGTATCCACACACTGAGGGAATCTCTGATGATGAACCACTCACTTTTGCAGCTaggcctggaacacacacacttcacttgTGAAGgtgctgtAGCTTTGGCTGAGTTCCTAGCTGAGAGCCGTCAGATCCAGCGCCTGGACGTGCGTGAGAACGAAGTCAGGGCTGGAGGTCTCATGGCCCTCTCTCTGGCCTTACGAATCAACCACAGCCTCACCTCACTAGACCTGGACCACACACCCAAACAGGAACAGGTACATCAGTCTCAAGCAGAGCTGAGGAGAACAATGCTGCCACAACTTAAATATGAGTACTTTAATCCACAGTCGTTAGTTGGTCATGTTAAAGTTCACAATTGGAAGTCAGATAAAGACAACTAAAAAGTAATCCATGGTGGTATGTCAGTGTTGCCTttttctcctctgtgtgtgtctgtgaaggcCTGAGGAGAACTATTCTGCCACTACCTTAATACAGGCCCCTGCTGGATTCACAAAATAATTACCCACACTTGCCATCTGTTTGTCATGATTTTATCTCAGCTAACTTATTTGCATATTAAAGCATTAATTAAAATCTCCAAGGAACGGAATTCTTACTTTAAAATTAACTCCAATGGCTTCGTGTG
>XM_036954639.1
ATGTGACGTTGATGCAGGTGCTCATGctgaggaggagatgaaggaggaTAAAGGagaagagcagcagcagcagcacatcTACATTCAAAAGTATAAACATTTGATAGGTTTAGCAAAGTTAGTAGAGATTGCAGGCAGTGAGAATATCAAAATGAGAAGTCGATCATTCTAAatttgtatgatatatattatatattgtgtAGTTATCAATTATATTGTAACCTATTTTATACAAGTTTAACTGAATTATTATTGTACTTGTTGCTGGCCATTTGATAGTTTTAGAAAATATTGGGTTTCACTTGCATCACATGGCATGGCTCATGAATAAGATATGGGCACATGAGTAGCCCTATCTTGTTTCTAGCCTGAGCATCTCCCTGGAAGTGTTGCACTGGAAACCTAAACTTTGGGAGAGTTTGAATCCTGTTGCCACTAGACGAGGAGTTTATTCAATGCCATCGCTTTTATAACAAAACGTGTAGTTTGATGACCTGTGAGCTACGACTGTATAAAACAAGAATGGCCCTTGAGATGTCCAACGATAAACGGATAAAACTCGGAGCGCTCTGGTGACTCGAATCCAATTGCGCCCCTATCCAAAAAATATCCTCCCCAACTGGGAGATTCATACTGGACGTTTGGAAGCGGAACGAACGATGACTAGACGCAGTGACAGCGATAATGACGGAGAGACTTCATCCCCGTCTCCGTCCTGGCGCCCAAAGAAATGTAAAGGTGAAAAGCATGTGTCTTTCCCTCCGGATGAGGAGATAGTGTCAGGCTTCGCTGAGCGCAAGGACACGATCAATGTTGACAGCCTCACCTTGGCAGAGGTAATTGAGGCCTACAAGAGGAGCTGCGACAGGCACCAGGTGGAACCTAAACCCAAGATTCTGGAACAACTTGAGcAGGTTACCAGTTTAAATGGCAGGGCCCCATGTCTGGATTTGAAAGGTGAGCGATTAGACCACCTTTCCTGCGAGGCTCTGGAAGTCATACTGAAATCACTGAGCTTTGATTTCATCAATCTGCAAGCGGCAGAGCTGGAGGAAAATgGAGCATCATCCTTGCTGGATATGATTTTGTATTATGAATCTACCCCCCATCTTGACATCTCTGACAACACCGGCATGGGGATATCTGGTTGGAAGGCCCTCTCTCATTTGATAAAgcagagtgtgtgtctgttGAGGCTGGATGTGTGTAACGTGGCCCTGCTACAGTATCCAGCCCAGGTCCTGTCAAGAGCCCTCCTAAGCAGCAGACTCACCGTGCTGCACCTCCAAAGCACCTGCCTCAGTGGCAGACCCCTCTTCACGCTTGTGGCTGCTCTGAAGAGCAACAGAGCGCTCCGGGAGCTGTACCTGTCCAACAATAATCTGAACAGCGAACAGGACTCTATGCAGTTAGGAGACCTGCTCAGATACAACAGCTCAATCACTACTCTGGACCTCAGCAACAACACCATAGCAAACTCAGGACTGGAGGAGATCTGTGAAGGTCTGAGAGTTCAGACAGATGGACTGAAGATTCTGATTCTATGGAACAACCAGATCACTAACAATGGACTGGTCCATCTAGCCAAAGTTCTGATATGGAAAGCTGTGAAAGCCTGTTCGCAGATGGAGAGCGCTCCCAATGAGCGTGTCCCAAGAGACTAAGAGTATATCCTATATGCCATGGATTATATGTGTAGGCCTACCTATGCTAGCAAATGTTGCATACAAAAATACAGTTAAACATCACACATAATGTATAAACCTAATACATGTCTGCCTACCCAGAAGATCGGGGTCAGTGGAGTAAGATTGTAAGGTGGGTTTTTTGTTCACCCGAAATTATGCTTTAATAATATTAGCATTCTTGTTATTGCTCAATTATCTTTTGTTGTTTCGACTAAGATTTCTGATCTTTACGTATGTGcttatttgtacattttgaagTGATGAAGTGTTGATTCTTTGAAGTGAAGTGTTTAAATTTGTTTTAATTGTTAAACTATTATTCAAAATGAACTAGTGTCAATGTTGGTCTATCGCATATCACAATT
>TU1845773
AATGCTGCCACAACaatacttgaaaataccGAGGGTTTCACtctgtgttgtgttctattggatttgacccaaacctGTAGTTTTTAattcaggccaaaaagtgaaTGTCTTTGCCTtgttgttttgcagtattacttaactGCCTTGTTGCGGTTAAGAATGGATGATTTGGAGGGGATTTTTTTGGaacacaggcttccttcttttcagtaatgtggagtgaatgcaatgttgttgatccctttgtattttcaagtattgtcGTGGCAGCattagggctgtggtggtcatgaagttttgtcagccggtgattgtcatgcaaataactgccggtctcacggtaattgattgttaattaacattaacacatttagcgtctcctggcttccacgcatagcatacaagccactgatgcagacatCTACATTTAAAGAAGTCtgataaatcaatttaatatagcctataccatcacaataaatccattatttattttagacaggtctaaagaaacatgatatgaagaaaatgtagtctatttcagaagaacagaatagcatactctgagttgtccttatgttaggtcctgatctggctatgccaaattgGCTACActaggtcatttagcagacaagatttgctcagaattccgtggcattatttgattgtatgaagaatacaattgatcATAGTtgagaataaaatagaaaggatatttttccaaACAATTTGAGGGAGTGCCTACATGCAGCTATTttgtgttgagtggttaacaaagaaacaggtcctcctatatgcttaatttagttaTTTATGCAACTGTATTCTGAtacaaacattgggctatatgttctgatttttaatacattctacgGCTGCAttatgcgactctaatgatgatttgaaaaaagttgcatgaaaggcatgagctctgctttgtttattgcataggctgcacacacttcatcagtatATCATTTACAATTTGACAAGGACTTGATAATGCCTTAAATTTTCCGGTGGTATCCTCTTTGTGTGGctgtaatgccccctaaaaaaatcTATGCCCTTTGTGGacattgtgcccttgggctgaatataataattataattcccttcttcCGGCTGCATGCTCCGATGcatctctcactcacatggctctctcagttatctcaattcttattagccaatgcccgTCACATGATCGGGtgtttctcacaggctacaagtgaagacaaaCACATCGGGGATGCAACTGCACGTCCTTATTGAATTCCGAGGCACATATTGAAGATGTTGGAAGAACTGTctacatttacttttcgtcagccaacaagaagAGTAGGcttaacgaacagcaaaagcactagcctatgtcaatctgcTATCCCCCATAATACAAAAGT

Function

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954637.1 False 2278 mRNA 0.46 10 30947453 30988951
XM_036954638.1 False 2275 mRNA 0.46 10 30947453 30988951
XM_036954639.1 False 2053 mRNA 0.43 9 30968875 30988951
TU1845773 True 1403 lncRNA 0.38 2 30911393 30947794

Neighbor

gene id symbol gene type direction distance location
LOC110498326 LOC106602473 coding downstream 1218200 29717062 ~ 29729253 (-)
LOC110498568 NA coding downstream 1735346 29208824 ~ 29212107 (-)
LOC110497635 LOC106602575 coding downstream 1856964 29008815 ~ 29090489 (-)
LOC110497632 snap23 coding downstream 1989723 28935079 ~ 28957730 (-)
tmem62 tmem62 coding downstream 2181250 28757259 ~ 28766203 (-)
bcl11ba LOC106601761 coding upstream 578402 31567353 ~ 31629055 (-)
setd3 LOC106602337 coding upstream 664711 31653662 ~ 31717607 (-)
ccdc85ca LOC106602325 coding upstream 744061 31730827 ~ 31790808 (-)
haus2 haus2 coding upstream 825515 31814466 ~ 31822631 (-)
jmjd7 jmjd7 coding upstream 998524 31987475 ~ 31994210 (-)
G1612665 NA non-coding downstream 38675 30908427 ~ 30908778 (-)
G1612631 NA non-coding downstream 55361 30845264 ~ 30892092 (-)
G1612367 NA non-coding downstream 190028 30757063 ~ 30757425 (-)
G1612349 NA non-coding downstream 201048 30746204 ~ 30746405 (-)
G1612336 NA non-coding downstream 207786 30739412 ~ 30739667 (-)
G1612802 NA non-coding upstream 121362 31110313 ~ 31110609 (-)
G1612813 NA non-coding upstream 132677 31121628 ~ 31121837 (-)
G1612825 NA non-coding upstream 143663 31132614 ~ 31132954 (-)
G1612833 NA non-coding upstream 147923 31136874 ~ 31137119 (-)
G1612841 NA non-coding upstream 153888 31142839 ~ 31143121 (-)
G1611431 LOC106602420 other downstream 911771 30034918 ~ 30035682 (-)
G1611392 NA other downstream 991667 29947400 ~ 29955786 (-)
G1611350 NA other downstream 1060763 29886345 ~ 29886690 (-)
G1610194 ttbk2 other downstream 2157040 28789421 ~ 28790413 (-)
mideasb elmsan1 other downstream 2215907 28704168 ~ 28735490 (-)
G1613218 NA other upstream 474170 31463121 ~ 31463896 (-)
G1613722 hipl1 other upstream 730971 31719922 ~ 31807247 (-)
fbxo34 fbxo34 other upstream 1027249 32013186 ~ 32062575 (-)
G1615240 NA other upstream 1469579 32458530 ~ 32461579 (-)
G1615357 LOC106602003 other upstream 1661975 32650926 ~ 32657769 (-)

Expression


Co-expression Network