clec14a


Basic Information

Item Value
gene id clec14a
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 32542666 ~ 32545053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573952.2
CTGTGTATCCCAAGTGAGGGACCCCCTGAATGCCTCACAAAGTGTAGTTGTTATTTAATGACACCATTCTGAGTTTCCTGTTTCAGGGTTGACCAAACCACACGAGGGGTATATTCCCCGAGGGAATGAATCACACAAAGTCCACTTTGTATCATCACATCCTGATACCAGGACCGTTCATCAGCAGGCTGGCATATCCTCTCACAAGTTCTGTTTATCCAGTTGGATGTGTGCACCTCTCTGGTTCTCTTTTCTGTGAAGTAAAACTTCCTGCAGCTCCGACAAAAACAAAAGTGAAGCTGGCCTGGTGATCTCACAGGGAAATATGATCAAAGAATCAAAGGATGTCAGTTACTGGAGTTAGGCTGATAGCACCTGGACTACATTAGTGTATTTTTCTCACAACTCATTCAGGCGTTGGACCTTAGGCTACTGTGTACTTTAATGCATGGGTAATTAGATTCTAAGTTGCTGTTGTTTGGCTGTGCCACCACCTTCTCTGcagaggaagtggatggctgtaTCAAGTCTAAGCACACTTCCTGTGCTTGTTGTCTTGGGAGGACCTATTAGGGGCAGCTAAGAAAGCAGCAGCAAAATGAGCATTGTCAGCCAGTCCATTACAGGAGCGGCTAGCAGGAGGACCATTGTCAGTCTGAATGAGAAACACTACCGTCAGATCGATGGTGCAAGCAGGGAGAATGGAGTACTATTGGATATGCCTGTGGAGTGTCTTGGGGGTAGGTTTGTGCGTTCCTGTTGCTAAACCCTATTACCTTCATCATCATCCTCTCAACTTTGACAAAGCTTCAGAAGCCTGTCAGCCTGGCAGTTTCCTAACTAAAGTGGCCAGTATGGAGGAAGCCTCGAAGATTTTGAAAGAAATCTCGGAAACACTATCCAAAGAACGTACATTTCAGTTCTGGGTTGGCTTGATGAAAGGAAAGGGGTCTTGCGTGAAACATGACGCACCTCTGAATGGTTTCAAGTGGACGGTGGATAACAGCAGCGACACAGAACTGGATCAGTGGAAGTATTTGCCCAAACCAACCTGCACGGGTATATACTGTGTATTTCTCTCTGGTGAGTTTAATGGAACTGAGATTGTGAACTGGGGATTTGTTTCCAGTACCTGTAAGACAGAGTATCCATTCATTTGTAAACAACGTAATGGAGAGGTACCTATCATGAAGCAGTGTCTTACCCCACACATACCAGATGCCCGATTACTCAGGCCAGATCCAAAGGATCACAATAAACTGAATCTGGATTGTGGGTTTGGGAAAATGTTTGAACTGACTTGCTCTGCAACGACTCTAACATGGGAACGTGATGATGGATCGGATATACGTGGCATTTGTGCTTCATGCAAAGCAGGTTATATGACAGATGGGTCTGGAAACTGTGTGGACATTGACGAATGCAGAGATCGGCCCTGTAAAGACCAGTGTGTCAACACTGAGGGTTCTTTCCTCTGTAAATGCtatgataaaaataaaaatcttcaAGATGAGGGCTCAATGGCATGCAACGAACTACCAGCAGCTACCATTGCTCCTGAAGGTAGTGACAACCATTTGGTCCAAGACTATACCCCAACTTCTAAGCCAGCAATTCAGGAGAAGCCTTTTCTCGCCTCTCTGCCGGACCAAcacactacaacttcccctacaGACGACATTGAGATAGCGGACAAGAGTGGAGACCAAGCCTACATTTTCATACCTGTGCTGATAGCAGTGATGGCCTTGGTCGTTCTATTAGTCGTGGTGTTATCTATTGTTAAGTGCTGCCTCAGGAGGCGATCACAGAAACTGGCCATGAAAAATGCAGAGAAAATGGCAATGAAGAGGGCGGAGTCCTCCAAGGAAAAATACTCCCTGGAAAACGCAAATGAGAAGGAGGCAACTTAAGCAGCAGGAGTGTGAACGAAGGCCACAGATAAGACTCAGACAACCTGAAGGTTTTAACTGACAATGTATACGATCTCTCATCACTTCCTTACATCAATAAGCACTGGAATAAAATGTGTTTATTGACAGGATTGTTATCTGCAGTAGGTCACTGTACAGGCTTTGGATATTATTGTTTTATTGTGAGGATTTGTATATGGGCTGAGGGCTCACATTTCTTCATAATATTTGCTAGGCCTTTATGTTGCATTTACTTATTTTATTGccgtactgtatatatgtggttTGTATATATGTCATCGTGTAACATATGAAGATGAATTTGATGCTTCAGTATTTTGGAAGTCTCTAGTCCCGATATAAAGGATGATAACCTCTGCCCGTGGTGTAAAATGCTCAGCCCATAAACCTAGGTCAGTCTCATTTCAAAAGAAAGACACTATCTTGTCAATAAATCAACTGTTTATAAAAGCAA

Function

NR:

description
C-type lectin domain family 14 member A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573952.2 True 2388 mRNA 0.44 1 32542666 32545053

Neighbor

gene id symbol gene type direction distance location
LOC110497675 foxa1 coding downstream 36655 32502939 ~ 32506011 (-)
LOC110497673 psma3 coding downstream 128072 32400915 ~ 32414594 (-)
arid4a arid4a coding downstream 143933 32376266 ~ 32398733 (-)
kiaa0586 kiaa0586 coding downstream 173484 32222497 ~ 32369182 (-)
irf2bpl LOC106602196 coding downstream 193622 32345908 ~ 32349044 (-)
sec23a sec23a coding upstream 46419 32591472 ~ 32618035 (-)
srp54 LOC106602043 coding upstream 73806 32618859 ~ 32628054 (-)
LOC110497688 npas3 coding upstream 225868 32770921 ~ 33161896 (-)
akap6 akap6 coding upstream 622690 33167743 ~ 33361399 (-)
LOC110497690 arhgap5 coding upstream 819410 33364463 ~ 33401640 (-)
G1615293 NA non-coding downstream 13065 32529298 ~ 32529601 (-)
G1615291 NA non-coding downstream 16325 32526112 ~ 32526341 (-)
G1615290 NA non-coding downstream 16589 32525869 ~ 32526077 (-)
G1615289 NA non-coding downstream 16831 32525609 ~ 32525835 (-)
G1615287 LOC100194703 non-coding downstream 17711 32524730 ~ 32524955 (-)
G1615303 NA non-coding upstream 3863 32548916 ~ 32549182 (-)
G1615349 NA non-coding upstream 104534 32649587 ~ 32650492 (-)
G1615352 LOC106602024 non-coding upstream 161551 32706604 ~ 32714044 (-)
G1615401 NA non-coding upstream 204686 32749739 ~ 32814084 (-)
G1615414 NA non-coding upstream 213801 32758854 ~ 32760174 (-)
G1615240 NA other downstream 81087 32458530 ~ 32461579 (-)
fbxo34 fbxo34 other downstream 480172 32013186 ~ 32062575 (-)
G1613722 hipl1 other downstream 735419 31719922 ~ 31807247 (-)
G1613218 NA other downstream 1078770 31463121 ~ 31463896 (-)
G1611431 LOC106602420 other downstream 2506984 30034918 ~ 30035682 (-)
G1615357 LOC106602003 other upstream 105873 32650926 ~ 32657769 (-)
G1615793 NA other upstream 867166 33412219 ~ 33413217 (-)
G1615810 hectd1 other upstream 933540 33478593 ~ 33479436 (-)
LOC110498336 LOC106611177 other upstream 2847807 35392412 ~ 35396783 (-)

Expression


Co-expression Network