LOC110498334


Basic Information

Item Value
gene id LOC110498334
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 34024150 ~ 34033284 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110498334
ATGGCCGTCATGGAGGTGCGGTCAGTGGGAGCCAGCCTCTTTGTCCTGGTTCAGCGGTATTTTACATTACGTGATGACACTGCCATGACACGCTGTTTGGTCCAGTCTCTGTTGACCAGGGCAGGGTTCGACTGGGCAGGGTTCGACGAGCAAGACATGGCAAGCAGGTTTGCAAAGTAATACAGCCATTCTGCAGGGCAGGGGTATGGGGCAGGTGTAATCCAGGTGTTGAGGAAGCTTGAATCTCCATACTTGAATGATCTTCCAGCCAGGACTGGCTCAGTTCAGCGGTCGTGGCTCATTTGGGAATGGTGGTGCAATGAAGTTAGCGGCTCAATtctccctcgctttctGCTCCCAGTACTCCAGGCTTGATGCGACGCTGACCCACTCTTGTTCTCTGTGTTACAATGGAGCAGTACTCCAGGCCCTCACGGTCCACCTGCACTTACAGGGGCTTTGGAACTGCCACATAAGTTTATTAACAAACTCATTTTATAGAtggaggaggtggaaggagaaGATTCTGCTCACAGTGACGCCAGAGTCCTCAACGAGCCAGAGTTCCCATTCTGTTGAGTCAAGGATGTGATGAAAGGAATAGCGTCAGTATTGAGGAGGTCATATCTGATCTAGATAATTGCATTGCAGCCCTACACTCTGTCCCCACTGCCATGTTCTGTGTGCTGCACTGCCTGGAGCCCCGGGATTGTCTGACCAATCGCTACGTTGGCCTGGAGAGGACAATCTGGCCTTGGGGGGGAGGCACAGACACTATCGCCTGCATGCCAGGGGCCATTGCAGGGTCACGTTATGGAATTTATACTATCCCCAAATCTAGCAGAGGTGCTGTGAAGGGGCAGAGGATGCTGATATGAATACTTAGTACCTACAAACTCTGTACCACTAGGCACCGACTGAAGGAGACTCTGGAACTGACAGTCTGCCAAACACAGCAGCACACAGCCCCCTACTTACACAAAGGGACTTTGACCGAGATAAACATACAGTCATGACTGAAAATATTAGCACCCTAGATAAATTATTAGCAAAAAAGCCCTCTTCAATTGAAACCACAGGTTTTTAATGtggttcaagtctggagactgagatggccattgcaaaatggtcaattaaccatttctttgtggattttgatgtgtacTTGGGGTTATTGTATTTCTGGAAGATCCACTAGTGGCCGAGTTTCAGCTTCCTTGCAGAGGCAACCAGGCTTTTGGCTAAAATTTCCTGGTACcgggttgaccttaacaaggggcccaggaccagtggaagttAAATATCCCTATAAGATCCACCAGCATATTTTAAAGTAGGTATGGGGGTTCTTTTCTGTATATGCATCCTTCGTTCCACACCGAACCTACCACTGGTGTGCCTGGCCAAAGAGctttattttcatgtcatctaaCAAATGTAAATGCTTGGACTTTTCTAAATGGCAATGTCACTTGGATTGAAACCAGTGCCATGGTCAggtgacatgaaaatagagctctttggcctcgcaccagtggtgggtttataATCGAAGGAAGGATGCGTATGCAGAAAAAAAACATACCTAGGAtttcaaggatctggaaagattctatatggaggaatggtctacaGTCCCTCCCAatatgttctccaatctcataaaaaaTCTAGAAGGGCTGTGTCGTTGTCCTCGGAAGGGGAAAACAGGGGTGCTAAAAATTTCGAGCCCTATCTTTTCGAGGgattaaaaaaaaacttgttaaacaaaatctttcTCTGagtaattgtattagtataaagacatatcatttcattttttttgcatgcaatatagctcagtatttgtttCAGGTTCATTTTATActgtcttttttgctcatctttatcaagggtacaTTGATAGTGTCACGTAATACTTCCGCTCCTCCCCTCCGGCATTCGACGTCGCAGGTTTACTAATCACCCATCCAGGGAACCATCATTACGGCACCTGGCtttcatcattacgcgcacctgcgcttCATCATTAAGCACACCTGGCCTCCATTACCTCCCCttatctggcactcccttaggttccttccccaggcagcATTGTTTCTGTTGTTCATGTCTAGATGCTACTCCTGTGTTGTATCGTTATTTGTTATATTAAATTTACCACCTGTTTCTCGACTCCCATCGTCGACGTTACAGATAGCTATTTCATACATCCTCTTATTCCGTGGTCATCCTTTTGCCATCTGTTGAACAAttaacgtaaactcactcactttaGTACATCGTGCTGGTCTGTACAACCTGACCTTATTTTAGTGCCCAAAAAACAcgatacttccagatcaactgtaatatcaataccaatgtaaagcacaatttctcccctttccaacaaaatcaatgACGAGACCTTCATGATGCCCATCTCTGCATGATTCAAGAAGACAATGAGCTCCGTCGGGTCTTTTTTTAAATGACGGGTGGGGGAACagcttttttcactcgatctgtccaatttATCagcttatcgcctctaaaatgtaaataaaacattataaagagtttatataatgtgtcattacatacctatttgaaggtttgtgtcgaatttgaactgggtttttagggcggtgctaaagtgatcttcagaagtaaacagcaGCTTTTGAGAGTCATGAAATCTTGCAGTGATGatgcaaaaaatgactaggtatcccccttaccCTGTacctttcttgtttttaaacggtGAGAgcagtgctacacctggtggagagaggcagTAAGACAGAATTAGTTGATTTATGCGCACTGTACATTACGCCATGACAGGTCACGATGTAACGTACAgcttctccaatactatagagccattactaTGTCAATCAACGCTTAAATAGAAccgtagttcacaccccagattttgatgTCAACAGTGTCGCTACAATCCCATTtgttttctttgcagcctcgtttgaatgtcgcggttgcgcacatttgtacggaatggggttagCGTACCTTAGTCTGTCACGAAAAACCTAATTTCTGAATTTAACATGagtagttcacaccccagattttgatgTCAACAGTGTCGCTACAATCCCATTtgttttctttgcagcctcgtttgaatgtcgcggttgcgcacatttgtacggaatggggttagCGTACCTTAGTCTGTCACGAAAAACCTAATTTCTGAATTTAACATGAGTTACTATATGTCTTCTTTTTGATA
>TU1849566
caatattcAGTGGTGCCATTATCCCTCTGTCACAGTCGTCGTAAATACACTCAGACCAAATCGCAGCGTGGAATCGGTTCGACATATTTTATTGATAGTCAAACGcacaaaaaacaataaagaataaactATACGTGAAGCTCAaacagtgctcacaggcaactacacagaaacaagatcccacaaaaccccgtggggaaatggctgcctaaatatgatccccaatcagagacaacactAAACAGCTgcgtctgattgggaaccataccaggccaacaaagaaatacacactagattacccaccctagccacaccccgacctaaccaaaatggagaataaaaggctctctatggtcagggtgtgacaccctcTAAGATTTTTGTTAACTCTAAAGATAGGCTTCTTTCTGTGTTTGAATTGCATTGCAGCCCTACACTCTGTCCCCACTGCCATGTTCTGTGTGCTGCACTGCCTGGAGCCCCGGGATTGTCTGACCAATCGCTACGTTGGCCTGGAGAGGACAATCTGGCCTTGGGGGGGAGGCACAGACACTATCGCCTGCATGCCAGGGGCCATTGCAGGGTCACGTTATGGAATTTATACTATCCCCAAATCTAGCAGAGGTGCTGTGAAGGGGCAGAGGATGCTGATATGAATACTTAGTACCTACAAACTCTGTACCACTAGGCACCGACTGAAGGAGACTCTGGAACTGACAGTCTGCCAAACACAGCAGCACACAGCCCCCTACTTACACAAAGGGACTTTGACCGAGATAAACATACAGTCATGACTGAAAATATTAGCACCCTAGATAAATTATTAGCAAAAAAGCCCTCTTCAATTGAAACCACAGGTTTTTAATGtggttcaagtctggagactgagatggccattgcaaaatggtcaattaaccatttctttgtggattttgatgtgtacTTGGGGTTATTGTATTTCTGGAAGATCCACTAGTGGCCGAGTTTCAGCTTCCTTGCAGAGGCAACCAGGCTTTTGGCTAAAATTTCCTGGTACcgggttgaccttaacaaggggcccaggaccagtggaagttAAATATCCCTATAAGATCCACCAGCATATTTTAAAGTAGGTATGGGGGTTCTTTTCTGTATATGCATCCTTCGTTCCACACCGAACCTACCACTGGTGTGCCTGGCCAAAGAGctttattttcatgtcatctaaCAAATGTAAATGCTTGGACTTTTCTAAATGGCAATGTCACTTGGATTGAAACCAGTGCCATGGTCAggtgacatgaaaatagagctctttggcctcgcaccagtggtgggtttataATCGAAGGAAGGATGCGTATGCAGAAAAAAAACATACCTAGGAtttcaaggatctggaaagattctatatggaggaatggtctacaGTCCCTCCCAatatgttctccaatctcataaaaaaTCTAGAAGGGCTGTGTCGTTGTCCTCGGAAGGGGAAAACAGGGGTGCTAAAAATTTCGAGCCCTATCTTTTCGAGGgattaaaaaaaaacttgttaaacaaaatctttcTCTGagtaattgtattagtataaagacatatcatttcattttttttgcatgcaatatagctcagtatttgtttCAGGTTCATTTTATActgtcttttttgctcatctttatcaagggtacaTTGATAGTGTCACGTAATACTTCCGCTCCTCCCCTCCGGCATTCGACGTCGCAGGTTTACTAATCACCCATCCAGGGAACCATCATTACGGCACCTGGCtttcatcattacgcgcacctgcgcttCATCATTAAGCACACCTGGCCTCCATTACCTCCCCttatctggcactcccttaggttccttccccaggcagcATTGTTTCTGTTGTTCATGTCTAGATGCTACTCCTGTGTTGTATCGTTATTTGTTATATTAAATTTACCACCTGTTTCTCGACTCCCATCGTCGACGTTACAGATAGCTATTTCATACATCCTCTTATTCCGTGGTCATCCTTTTGCCATCTGTTGAACAAttaacgtaaactcactcactttaGTACATCGTGCTGGTCTGTACAACCTGACCTTATTTTAGTGCCCAAAAAACAcgatacttccagatcaactgtaatatcaataccaatgtaaagcacaatttctcccctttccaacaaaatcaatgACGAGACCTTCATGATGCCCATCTCTGCATGATTCAAGAAGACAATGAGCTCCGTCGGGTCTTTTTTTAAATGACGGGTGGGGGAACagcttttttcactcgatctgtccaatttATCagcttatcgcctctaaaatgtaaataaaacattataaagagtttatataatgtgtcattacatacctatttgaaggtttgtgtcgaatttgaactgggtttttagggcggtgctaaagtgatcttcagaagtaaacagcaGCTTTTGAGAGTCATGAAATCTTGCAGTGATGatgcaaaaaatgactaggtatcccccttaccCTGTacctttcttgtttttaaacggtGAGAgcagtgctacacctggtggagagaggcagTAAGACAGAATTAGTTGATTTATGCGCACTGTACATTACGCCATGACAGGTCACGATGTAACGTACAgcttctccaatactatagagccattactaTGTCAATCAACGCTTAAATAGAAccgtagttcacaccccagattttgatgTCAACAGTGTCGCTACAATCCCATTtgttttctttgcagcctcgtttgaatgtcgcggttgcgcacatttgtacggaatggggttagCGTACCTTAGTCTGTCACGAAAAACCTAATTTCTGAATTTAACATGagtagttcacaccccagattttgatgTCAACAGTGTCGCTACAATCCCATTtgttttctttgcagcctcgtttgaatgtcgcggttgcgcacatttgtacggaatggggttagCGTACCTTAGTCTGTCACGAAAAACCTAATTTCTGAATTTAACATGAGTTACTATATGTCTTCTTTTTGATAGAGAAAAtaattgaataaaaaaaaaagtaaagtaaaaaattgtttgatgtatttgtgtgtttgttaCTGACAATGTAAACCAACATCTGCGAAATACAAGCCGAGTACTTTCTTTGAGTTAAAGTACAGGAGAGATAATTAGATGTTCCTCTTCTGACACTCCTCAGCAGTCGGACTTTCAGAAATTGAATGTGACAGAACAGGAAGAACCTGCGCGGACAGGTGAGGTGAAGGCTTCCGACTCTCGAACGCAATGATCACGAACATGCCAGGGATGATTCTGGCTCAGTGGGAGTAACATTTTGTCCAGTACCCTGTATATTTCCAAGTGtattatttattccttgtgttatttttctattataaaatgtttctctctctctgcattgttgggaagggcccgtaaatCAGAATTGAACTCTTacaggctgaccacaccgcttgtgtcgcgtgcgcgagcgttgcaaaatacatttagaaatcgtgtaacacggaacccaaaccgtctgcgcgcgtgcgccatcgtgcataaatctATTTtgtcccccacaccaaacgcgatcacgacaggcaggttaaaatatcaaaccaactctgaaccaattatattaatttggggacaggtcgaaaagcattatacatttatggaaatttagctagttagcttgcacttgctagctaatttgtcctatttagctagcttgctgttgctagctaatttgtcctgggatataaacattgagttgttattttacctgaaatgcacaaggtcctctactccaccaataaatccacatataaaacggtcaaccgaattgtttctagtcatctctcttccttccaggctttttcttctcttgactttatattgcgattggcaattttcataaattaggtgcattaaaGCCACTGACCTctttcgtctttcagtcacccacgtgggtataactattgaggagatggcacgtaggtacctgcttctataaaccaataaggagatgagagaggcagGACATGCACCGCGATCTGCGCCAGAATAGAACTGATTTCTATTTTACAcacgtgagcagtgtgggtgcaataattgaataacatagatttctacatttattttgacctgagctgtgttcgaatacccatactataTACTGTTAGTTCATTTTAGTAAACAaacggtatcctttcagttgagcgtactagcgCTTCGCCTGTCtgccggaagttgatgctgttgtaatgcaacctcttgctagcttgttagcataacaaattaatATCAAGACTTTGGGTGTGTTGCTAAATTCAAtcgcacactggatgctctggctgaggagtagggttgatccaagcgTTCTGACCTCCCAACTGCAGTCAAGCACctaagctaacttgctagctacttccagtcacaaatgagagaacacctcactctgaccattttactcgccctagcagagctggttaggcagttttcatgttatccagagttttggtgactgtaactgtgctgctgtcaacaatttaattacgcttttctgctgacgtttactgacactggccacaTTCAACGTAGTAAATTCATCCCTTATTCTGCGCTCTGCCTCTGGCACAGTCAGactgctctgaaatcggagtagatagccagagcgaatttacaaaCG

Function

NR:

description
poly(ADP-ribose) glycohydrolase ARH3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110498334 False 3250 mRNA 0.44 6 34025811 34033284
TU1849566 True 4689 lncRNA 0.42 1 34024150 34028838

Neighbor

gene id symbol gene type direction distance location
LOC110498333 NA coding downstream 2371 34021006 ~ 34023440 (-)
tecpr2 LOC106600983 coding downstream 16774 33975022 ~ 34009037 (-)
rcor1 LOC106600978 coding downstream 56594 33958280 ~ 33969217 (-)
LOC110497707 LOC106600975 coding downstream 68209 33941556 ~ 33957602 (-)
ehd4 ehd4 coding downstream 90655 33910609 ~ 33935156 (-)
LOC110497713 LOC106601641 coding upstream 43525 34076809 ~ 34081232 (-)
LOC110497721 LOC106601106 coding upstream 831562 34864846 ~ 34919404 (-)
LOC110497722 LOC106601115 coding upstream 1289458 35322742 ~ 35327947 (-)
LOC110497723 LOC106601119 coding upstream 1295509 35328793 ~ 35336408 (-)
LOC110497725 LOC106601170 coding upstream 1327729 35361013 ~ 35377653 (-)
G1616061 NA non-coding downstream 173520 33851707 ~ 33852291 (-)
G1616060 NA non-coding downstream 174290 33851213 ~ 33851521 (-)
G1616059 NA non-coding downstream 174811 33850773 ~ 33851000 (-)
G1616056 NA non-coding downstream 178400 33847201 ~ 33847411 (-)
G1616048 NA non-coding downstream 191183 33834417 ~ 33834628 (-)
G1616125 NA non-coding upstream 5807 34039091 ~ 34039345 (-)
G1616151 LOC106601017 non-coding upstream 20108 34053392 ~ 34054457 (-)
G1616144 NA non-coding upstream 29453 34062737 ~ 34063198 (-)
G1616143 NA non-coding upstream 30311 34063595 ~ 34063743 (-)
G1616155 NA non-coding upstream 36284 34069568 ~ 34069820 (-)
G1615810 hectd1 other downstream 546375 33478593 ~ 33479436 (-)
G1615793 NA other downstream 612594 33412219 ~ 33413217 (-)
LOC110497688 npas3 other downstream 1250107 32770921 ~ 33161896 (-)
G1615357 LOC106602003 other downstream 1368042 32650926 ~ 32657769 (-)
G1615240 NA other downstream 1564232 32458530 ~ 32461579 (-)
LOC110498336 LOC106611177 other upstream 1359576 35392412 ~ 35396783 (-)
G1619119 NA other upstream 2368270 36401554 ~ 36405336 (-)
LOC110497753 spred1 other upstream 2621239 36654523 ~ 36840800 (-)
G1622757 LOC106600509 other upstream 4923740 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 5331973 39365257 ~ 39370631 (-)
G1616116 NA non-coding upstream 1495 34030333 ~ 34030546 (-)

Expression


Co-expression Network