LOC110497749 (LOC106601399)


Basic Information

Item Value
gene id LOC110497749
gene name LOC106601399
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 36641587 ~ 36674532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574081.2
AGTGGTGCGACAGGCAGTACACATACATAAACCTCATTACTATCAACCGCTGGGGTGCACCCACCCATGTCAAGCTGAGAAGGATAGGCAACATCTATGGCTTCAGACCCTGTCATTGCTCCAGACACATTTTCGCCTTACTTTTCGGGTATATTTTATCATGCCATTCGAAGCAACAATAATACATATTTGTGACAAGGGCGCTGgcacatttgttttatttttctaCATTTTCTCAAGCGCTATTGAGCAGATCTATGGTCTTTGTGTTTATTGAGAAGAACAATAGCTATGAAATTTCCACTGGAAAACCCTAGAAAACAAGTCAATTTGGACCCGGAACAACAAGTGGCAGTCCAAACCAACTTGGTCCCTCCCAAGAAGGTCCAGTCAGGGATGGTCCAATCCAGCCCTGTCCAGGCCAGTGGGGCAGCCATGCAGAACCCGATGGGCTGTGATCCCAAGGGGGCCAACGGCCACTGCCCCTTACCCCGGctctccgtctcctcccgttCCGCCAGCGTGGTGGCCAGCATGGACACCACCGGTGACCTCTTGGCCCTCCACTCTGTGATGAAGTGGAAGACGGTGGTGGCggtgtttgtggtggtggtggcctaCTTGGTGGGTGGCGGCTTGGCCTTCCGGGCCCTGGAGCAGCCTTTCGAGAGCAACCAGAAGGACAGCATCACCCTGGAGAAAGCTTTGTTCCTGCAGAGGCACCGCTGTGTAATGCCTGCTGAACTGGAGGCACTCATCaagCATTCCATCGACGCTGTCAGTGCAGGAGTCAGTCCGATCGGAGACACGTCTTACAACTCCAGTCACTGGGATCTGGGCAGTGCTTTCTTCTTTGCTGGAACCGTGATCACAACGATAGGTTACGGGAACATAGCACCCAGCACGGAGGGAGGGAAGATCTTCTGCATCCTGTACGCCATATTTGGCATCCCGCTGTTTGGGTTCCTCCTGGCTGGCATCGGAGACCAGCTAGGAACCATATTTGTCAAGAGCGTCTTGAGGGTGGAGAAGATATACAGGCAAAAACACAAACAGATCAGCCAGACCAAAATCAGAGTCACCTCCACCATACTCTTCATCATAGCTGGGTGCATAGTCTTCGTTGGCATCCCGGCAGTCATTTTCAAACACATCGAGGGATGGACGACTCTGGATGCTATCTACTTTGTCATCATCACGCTATCAACCATTGGCATAGGGGACTATGTGGCAGGTGGGGATCGGAAGATCGAGTACATGAAGTGGTACAAGCCTCTGGTCTGGTTCTGGATCCTGGTGGGCCTGGCCTACTTCGCTGCTGTCCTGAGCATGATTGGAGACTGGCTCAGAGTGCTGTCCAAAAAGACCAAAGAGGAGGTGGGGGAGTTCAAGGTCCATGCGGCTGAGTGGAAGGCCAACGTGCGGGCCGAGTTCCGAGAGACGCGGAGGCGGCTGAGTGTGGAGATCCACGACAAGTTGCAGCGGGCCGCCACCATCCGCAGCATGGAGCGCAGGCAGCTGGGCCTGGAGCAGAGGGCCCACTCCCTGGACATGCTCTCCCTAGAGAGGAGGGCTGTGTTTGCCAGCCTGGACCAGGGCCGCTTCAAAACCTCCTCCCAGGAGAGCATTGACACCAAGCTGAATAACTTGAGGGCGAAAGGGGCAGGGGATCTTTGTTATGACCAGCGGAGAGGCAGTGAGCAGACACAGCAGGCCTCGTCAGAGGATAATCTCTTCAACCTCCGCTTCCGCTCCCTCACCAAGCTGGCCAAGAGACACAAGAACCGCGACCTGAAGAGGAACATTCCTGAGGACGTGCGGAGGGCCTGTGAGgcgatggagaggaggaaggaggaggagggagcggagaaggaggaagaggtggaagagatggaggtggaggaggaagggggagagaggaaagagggcaATACCAGCTCAACAAATTTAGAGTATGCAGACGAATGCTgaggacaaagaaagagagaacgataGAATATTGAAAGAAAGAGAGCTTGAGCCCCAGAAAAGTCCCTATTTTGATGTCTCAAATTGTGCCTGGTTGTTTTTTCTTTTCAGAGCACCCTACTTCCTATccaaccccaccccacccccaaccGACAAAAAAGCAGACGCAATGTGGGATAGCTTCTCTTTTTTACCCAAGGCTTATGTGAGCAAGTAACCCAGTGAACTAGTGCAGAGCTTCCTAAACCCGGTCCTGGACCGAATCTACTTTTACTGATGAGGTTTTGATGGCCATTGGACCCAGTTCATTCTGCACATCATAGGAACGATTTGTTAGTgtgacattttgttactttattcTGTCATTTAAGATTGATTATGAATTTCATGTATTTTATTAATTGTATTTTACACAGCATGTCTGTGTACAGTATCTATGTAATATCAATTTCTGCAATTCTTTTTTTTCACAGTAAAAGAGAATACAATTATATTTGTCCACCATACGCTACATATATGTGTTAGTGTTTTTCTCTCACACAATCCGATCAAGTATTGCATTTACCTATACTGAGGCAGGAACTTAACCATATGGGTTGTAGCCACTTTACAGTTGACTAATGTTTTTGGTCCTTTGCTATGTTTTTGTCATTGATGTGCTTCCTAAAGCTTTACCTACTGGGCAAAAACTAGTTGAATTAATGatgtttccatgtaatttcaaccCAAGAAATCTACGTGATGTCATTGAATGAACGagaaaaactgattggatttgcaaaagtCATCAACGAAAGGGAATGACATATTTTTTCACtcaactttgaacctaaatccaatgaaatggtgacacttgttgttgatttcgAAACTaaacgttgaactgacgtctgtgcccagtgggtactcAGTAATCAAAAACACTAATTATGTGAATAGTGGTAACAACCTTTACTCTATCAAATACAATTACATAATGGATTTTGGTGTGAATGAGCTAGCCTCTCCATTATTTAATAAGGGAACACATGATTATTGTATTTTTGGTAGTCTAGTTATGTTCCTCTACGGTGGAACATTGAATTCTGTATTTGGTCCCTCTGGTCTTCTGCATAGTCAAAGAAGGAACAGATGCTGTCGGGACTTAGGCTCACTCATCATATCAACAACAATACATATTAGATAGACTGAAAAGCTTGTAGTCCTGATAATGAATAATGTAAGTACTGGTTATAACCTCTATTTCTTGAATTCTATCATAAAAATGGCTTACCATGATAATGACCTTTCTAAGAACCAGAATGGATTTTCCTTGCTCAGTCTTTTTTGTGCAAACATTATATCAAATGAAGTGAGTGGCTTtctgggaataaatatcactaaGGAAAATTAAGCTGATGTTGTGAAATG
>XM_021574082.2
AGTGATGTTTATCTAGAACCTCAAAATAACAGCGCAAGATTTTATGGCATCTTTTTAAGGGGCACAGTGACAGTATTGCAGAGATTACTGGTCTCGATGTAGGCTATTGATTTTGATACATTATGTATGATTTTTCCAACATCGGAtgatgtaatgtttttttttttgttgtctatgCTTGAATACATTATTTATGACTTTTACTCCCGCGCCATGTGCCTACACGCCGGTACCCAATCGTGATTGGAGTGGAGTGGGAATTAACTGAAAAAGGAGGATAGACGCTACCCCCCCCTGTCACAAAATATGGCAGTCCAAACCAACTTGGTCCCTCCCAAGAAGGTCCAGTCAGGGATGGTCCAATCCAGCCCTGTCCAGGCCAGTGGGGCAGCCATGCAGAACCCGATGGGCTGTGATCCCAAGGGGGCCAACGGCCACTGCCCCTTACCCCGGctctccgtctcctcccgttCCGCCAGCGTGGTGGCCAGCATGGACACCACCGGTGACCTCTTGGCCCTCCACTCTGTGATGAAGTGGAAGACGGTGGTGGCggtgtttgtggtggtggtggcctaCTTGGTGGGTGGCGGCTTGGCCTTCCGGGCCCTGGAGCAGCCTTTCGAGAGCAACCAGAAGGACAGCATCACCCTGGAGAAAGCTTTGTTCCTGCAGAGGCACCGCTGTGTAATGCCTGCTGAACTGGAGGCACTCATCaagCATTCCATCGACGCTGTCAGTGCAGGAGTCAGTCCGATCGGAGACACGTCTTACAACTCCAGTCACTGGGATCTGGGCAGTGCTTTCTTCTTTGCTGGAACCGTGATCACAACGATAGGTTACGGGAACATAGCACCCAGCACGGAGGGAGGGAAGATCTTCTGCATCCTGTACGCCATATTTGGCATCCCGCTGTTTGGGTTCCTCCTGGCTGGCATCGGAGACCAGCTAGGAACCATATTTGTCAAGAGCGTCTTGAGGGTGGAGAAGATATACAGGCAAAAACACAAACAGATCAGCCAGACCAAAATCAGAGTCACCTCCACCATACTCTTCATCATAGCTGGGTGCATAGTCTTCGTTGGCATCCCGGCAGTCATTTTCAAACACATCGAGGGATGGACGACTCTGGATGCTATCTACTTTGTCATCATCACGCTATCAACCATTGGCATAGGGGACTATGTGGCAGGTGGGGATCGGAAGATCGAGTACATGAAGTGGTACAAGCCTCTGGTCTGGTTCTGGATCCTGGTGGGCCTGGCCTACTTCGCTGCTGTCCTGAGCATGATTGGAGACTGGCTCAGAGTGCTGTCCAAAAAGACCAAAGAGGAGGTGGGGGAGTTCAAGGTCCATGCGGCTGAGTGGAAGGCCAACGTGCGGGCCGAGTTCCGAGAGACGCGGAGGCGGCTGAGTGTGGAGATCCACGACAAGTTGCAGCGGGCCGCCACCATCCGCAGCATGGAGCGCAGGCAGCTGGGCCTGGAGCAGAGGGCCCACTCCCTGGACATGCTCTCCCTAGAGAGGAGGGCTGTGTTTGCCAGCCTGGACCAGGGCCGCTTCAAAACCTCCTCCCAGGAGAGCATTGACACCAAGCTGAATAACTTGAGGGCGAAAGGGGCAGGGGATCTTTGTTATGACCAGCGGAGAGGCAGTGAGCAGACACAGCAGGCCTCGTCAGAGGATAATCTCTTCAACCTCCGCTTCCGCTCCCTCACCAAGCTGGCCAAGAGACACAAGAACCGCGACCTGAAGAGGAACATTCCTGAGGACGTGCGGAGGGCCTGTGAGgcgatggagaggaggaaggaggaggagggagcggagaaggaggaagaggtggaagagatggaggtggaggaggaagggggagagaggaaagagggcaATACCAGCTCAACAAATTTAGAGTATGCAGACGAATGCTgaggacaaagaaagagagaacgataGAATATTGAAAGAAAGAGAGCTTGAGCCCCAGAAAAGTCCCTATTTTGATGTCTCAAATTGTGCCTGGTTGTTTTTTCTTTTCAGAGCACCCTACTTCCTATccaaccccaccccacccccaaccGACAAAAAAGCAGACGCAATGTGGGATAGCTTCTCTTTTTTACCCAAGGCTTATGTGAGCAAGTAACCCAGTGAACTAGTGCAGAGCTTCCTAAACCCGGTCCTGGACCGAATCTACTTTTACTGATGAGGTTTTGATGGCCATTGGACCCAGTTCATTCTGCACATCATAGGAACGATTTGTTAGTgtgacattttgttactttattcTGTCATTTAAGATTGATTATGAATTTCATGTATTTTATTAATTGTATTTTACACAGCATGTCTGTGTACAGTATCTATGTAATATCAATTTCTGCAATTCTTTTTTTTCACAGTAAAAGAGAATACAATTATATTTGTCCACCATACGCTACATATATGTGTTAGTGTTTTTCTCTCACACAATCCGATCAAGTATTGCATTTACCTATACTGAGGCAGGAACTTAACCATATGGGTTGTAGCCACTTTACAGTTGACTAATGTTTTTGGTCCTTTGCTATGTTTTTGTCATTGATGTGCTTCCTAAAGCTTTACCTACTGGGCAAAAACTAGTTGAATTAATGatgtttccatgtaatttcaaccCAAGAAATCTACGTGATGTCATTGAATGAACGagaaaaactgattggatttgcaaaagtCATCAACGAAAGGGAATGACATATTTTTTCACtcaactttgaacctaaatccaatgaaatggtgacacttgttgttgatttcgAAACTaaacgttgaactgacgtctgtgcccagtgggtactcAGTAATCAAAAACACTAATTATGTGAATAGTGGTAACAACCTTTACTCTATCAAATACAATTACATAATGGATTTTGGTGTGAATGAGCTAGCCTCTCCATTATTTAATAAGGGAACACATGATTATTGTATTTTTGGTAGTCTAGTTATGTTCCTCTACGGTGGAACATTGAATTCTGTATTTGGTCCCTCTGGTCTTCTGCATAGTCAAAGAAGGAACAGATGCTGTCGGGACTTAGGCTCACTCATCATATCAACAACAATACATATTAGATAGACTGAAAAGCTTGTAGTCCTGATAATGAATAATGTAAGTACTGGTTATAACCTCTATTTCTTGAATTCTATCATAAAAATGGCTTACCATGATAATGACCTTTCTAAGAACCAGAATGGATTTTCCTTGCTCAGTCTTTTTTGTGCAAACATTATATCAAATGAAGTGAGTGGCTTtctgggaataaatatcactaaGGAAAATTAAGCTGATGTTGTGAAATG

Function

NR:

description
potassium channel subfamily K member 10-like isoform X1

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
K04920 KCNK10, K2P10.1; potassium channel subfamily K member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574081.2 False 3378 mRNA 0.47 7 36641587 36673956
XM_021574082.2 True 3336 mRNA 0.47 7 36641587 36674532

Neighbor

gene id symbol gene type direction distance location
LOC110498571 NA coding downstream 48547 36590933 ~ 36593040 (-)
LOC110497747 LOC106601376 coding downstream 221657 36415726 ~ 36419930 (-)
il17a/f1 LOC106600843 coding downstream 271220 36368786 ~ 36370367 (-)
ccdc88c LOC106601343 coding downstream 318548 36240780 ~ 36323039 (-)
LOC110497741 LOC106601320 coding downstream 404353 36225227 ~ 36237234 (-)
LOC110497751 LOC106601420 coding upstream 45389 36719921 ~ 36739629 (-)
fam98b fam98b coding upstream 74321 36748853 ~ 36757484 (-)
LOC110497753 spred1 coding upstream 90173 36654523 ~ 36840800 (-)
LOC118941471 NA coding upstream 354722 37029254 ~ 37036523 (-)
cdin1 cssa01h15orf41 coding upstream 492238 37166770 ~ 37243458 (-)
G1619518 NA non-coding downstream 111416 36529893 ~ 36530171 (-)
G1619516 NA non-coding downstream 114906 36526355 ~ 36526681 (-)
G1619512 NA non-coding downstream 120240 36521093 ~ 36521347 (-)
G1619155 NA non-coding downstream 202282 36439103 ~ 36439305 (-)
G1619632 NA non-coding upstream 4192 36678724 ~ 36684107 (-)
G1619895 NA non-coding upstream 333010 37007542 ~ 37008012 (-)
G1619905 NA non-coding upstream 342084 37016616 ~ 37016834 (-)
G1619916 NA non-coding upstream 346896 37021428 ~ 37021726 (-)
G1619119 NA other downstream 236251 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 1244804 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 3162151 33478593 ~ 33479436 (-)
G1615793 NA other downstream 3228370 33412219 ~ 33413217 (-)
LOC110497688 npas3 other downstream 3865883 32770921 ~ 33161896 (-)
G1622757 LOC106600509 other upstream 2282492 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 2690725 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 2721536 39396068 ~ 39411784 (-)
G1623175 NA other upstream 3000907 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 3792812 40467344 ~ 40547622 (-)

Expression


Co-expression Network