LOC110497783 (LOC106600563)


Basic Information

Item Value
gene id LOC110497783
gene name LOC106600563
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 38654186 ~ 38674247 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954749.1
TAAGGGGAACATTCACTGTGTTGTTACATACTACTACATATATAGTTATGGAGTTGAGCCTTTAGTTATTACACAATACACATACAGAAAAATTAATTGTGTTACATAACAGTAATTATTACTGTGTTAATGAAAATGTTCTTAGTTACCAGAGAAATTACAGCATTACGACAGCTTTATTGATTTTATGATGCTAGCATTCAAATTGAAGGTCTCAAAACGTCTTGAACACAAACTTCATATCCTACAGTGTGCTGTGTTAATCAGCACCAAAGCACCATGAATTGCATACTGGGACTTTCTGTAACAGTAGGATCAAAGGTGAAGTAGCAATTTACATGATACAGCCTACAGTTCTGTATAACCATTAGCATAGCAAACATGAACACCTTTCTCACAGAGCCTAAAGCTGAGGACCGGTGGTCCTGGATCTGATGTTGATTATTGTAGATTCAGTTGTCTGTGTTACTGTATGTGGGATTAGGGAGCACCATACATACAGCACAGATAATCTATGGGGTTACTCATTTATCCATTCCTTTGTGCTGTCCAGAGTTTCACAGACCATCTAGGAAGTCATAAAAGTTCAACTTTGAGTTGTTTATGATGTGATGGATTGTGGAAGGGTGGCTCTTTTGGTCTCTTAAGGCAGCGAGGTGTAGTGTTAGTGATCAAGGTGTTAAACTCTCCCCTGCAAAGTAGATAGATTTTCTTTATCTAAACCTCACCCTGGAGATTCTGCATCCTGGATCAGGATAGACAACGACAGTAAAACAGAATAGGCGTGTGTATCAAGAGGCAGAGCTCGGTCGATCGTGAGTGGCTGGGAATACTGGAGAGATACAAAGGTTGGCTTGGATTTAAGTTTACCAGTAAGTAAACCCTCTGGATTTGAACTGGTGGAGTTTTTCACTGGTCTTAGGTATCATGTACAGCTTGGTGTGGCAAGTCCAAGGACAAAGTTCCAATCCGAATGACCAActggggaggaagagaaggacgGTGGTGTCCTCCCTCACAGAGGATGAAGAGCTGACGGAAGTCCCCAAGTCATACAGCAGCAACAAGGTGAACACCACCAAGTACTCCTTCCTCTCATTTGTCCCCAAGAATCTGTTTGAACAACTCCATCGCTTCGCAAATGTCTGTTTCCTCTTCCTGGCAGCTCTGAACTTTATCCCAGTGGTCAATGCCTTTCATCGCATTATTCCCATTCTCCTGGTGCTGTCAGTGACAGCCGTGAAGGATCTCTGGGAAGACTATAGAAGAGACAAATCAGACAAGATCGCCAACGGACGCATCTGTGAGATTTACAGCAaGAAACAGCAGACTTATGTGGACCAGCGTTGGCAGGACGTCCGCGTGGGGGACTTTGTCCGTCTGTCCTGTAACGAGATCATCCCTGCAGACATGCTGCTGCTGTACTCCTCTGACCTCCACGGCGTCTGCTACATCGAGACGGCCAACCTGGACGGGGAGACCAACCTCAAACAGAGacaggtggtcagagacctgccaCAAGGTTCCGAGTTGACTCCAGAGAACTTCCACAGTCGCATTGAATGCGAGAACCCCAACAACGACCTCAGCCGGTTTCGAGGTTACATGGAGCACCCCAGTAATGCTCGTGTGGGCTTACACAACGACAACCTCCTCCTGAGAAGCTGCACCATCCGCAACACAGAGACCATCATAGGCATCGTGGTCTATGCAGGTCACGAGACCAAAGCCATGAAGAACAACAGTGGGCCGCGGTATAAACGCAGTAAACTGGAGCGCAGGATGAACATGGACATACTGTGGAGTGTTGTCCTGCTGGTCATCATGTGTCTGACCGCAGCTATAGGCCATGGTCTCTGGCTCAGGAACCTGGAAGAAGCTTCCTTTCTGATCCCTGACACCACATCTCCTGCCCTGGCTGGCTTTTACCTGTTCTGGACCATGATCATAGTACTACAGGTGCtcatccctgtctccctgtacgtGTCCATCGAGATTGTCAAACTGGGTCAAATCTTCTTCATCCAGAACGACGTGGACTTCTACAATGAGTACCTGGACTCCAGGATCCAGTGTCGAGCCCTGAACATCACAGAGGACCTGGGTCAGATCCAGTATGTGTTCTCAGACAAGACTGGCACACTGACGGAGAACAAGATGGTGTTCCGGCGTTGCACCATTGCTGGGGTGGAGTACCCCCACGAGGAAAATGCGCGGAGGCTTGAAGTGTACAAGCAGGAGGACGACGAGGCGATGGGCCGCTCCCACACGCTCAAGTCACGTGCCAGCGCCAAGTCCCTGAGCTGCAAGTCGCTCAGCTGCAACCGCAGCTCCGTGTCcctgcacacactgacaggcCACtcagaaggggagggggaggagacccCCAGCCCCACCCTGCCCCGACATAGTGCCTTCAGTAGCCCTATGGAGAAGGATGTAGTCCCGGACCCTTTCCTGGTACAGAAGCTGAACTGTCTGTCCTCCCCGCTCTTCCTTTTGGCGGACGCCAGTATGGAGCTAACCTACATCGTGGACTTCTTCATGGCTCTGGCCATCTGCAACACGGTGGTGGTGTCCTCACCCAACCAACCCCGCCATGTGGTCCAGGTGCCTGAGGTCTCCCGTACCCCCCTTAAATCCCTGGAGGACATCAAGATGCTGTTCCAGCGTTTCAGCCTCCCCCGCTTCTCCACACTCTCTCCTCcacacactacagagagtacTCGCAGCTTCACCGGCAGGCTCTTCGCCAGGGGCAAGCCAGCCTCCTTCACCCCCACCCCTTCCCCTATCCCCACCAAGAGGGGTACAGATCCAGACGGGGAGCCTAACTTTGAGGCCTCCATCCTGATTATCAAACCAGGGTTGGCTGGACCCCCTGGAGAGGATGGGGACCaaggggatgaggagggagaacaTGGCTCTTGGAAAGGTGAAGAGGACAATATTGTACAACTCAACCCAGGGGCCTGGAGCGGGCTGGAGAACTCTAACGGAGCCCAAGACCTTCCCTGTGAACTTGGGGCAGACGAACTGATCTATGAGGCGGAGAGCCCAGACGAGGCGGCTCTGGTCCACGCGGCAAGGGCCTACCACTGCACCCTGCGGGGACACTCGCTGGAGCGCCTTCTGGTGGAGCTGCCGGGGATGGGCAACCTGGCCGTGCGCCTGCTCCACATCTTGCCATTCGACTCCACCCGCAAGAGGATGTCTGTGGTGGTCCGCCACCCACTCACCAAGCAGGTGGTGGTCTACACCAAGGGCGCCGACTCCGTCATCATGGACCTGGCAGAGTCACCTAAAGGTGCTGAGCAGTCAGAGAGCAGGCAGGGTCACATCAGAGAACAAACCCAGAAACACCTAGACAACTACGCCAGGGAAGGCCTTCGCACCCTCTGCATCGCTAAAAGGgttttggaggaggaggagtatgaGGTTTGGTTGAAGCGTCATGCGTTTGCGGAGACCAgtatagagaacagagaggagcttCTACTGGAGTCTGCACAAAGACTGGAGACCAACCTGACTCTACTGGGGGCAACAGGGATAGTGGATAGACTCCAGGAAGAGGTTCCAGAGACCATCGAGGCACTACAGAGAGCAGGGGTCAAAGTATGGGTCCTCACTGGGGACAAACAAGAGACTGCCATAAACATTGCCTGTGCCTGCAAACTACTCAGGTCCACAGACCACCTGCTGACTGCTAATTGTGGTAGCAAGGAGGCGTGCAAGGCCTTGTTGTTGGAGCTGCGGGCGGAGATGGAGTGCGGAGAGGCAGCTGAGGGTACGTCGGGCTTCACCCTGGTTGTAGACGGGCGCACGCTGGAGTTTGCCCTGCAGGAGGACCTGAAAGGGGACTTCCTGGAGCTGAGCCGGTGCTGCAGGGCCGTGATCTGCTGCCGCTCCACCCCCCTGCAGAAGAGCCAGGTGGTACGGCTGGTACAGGACCAGCTCCAAGTCATGACCCTCGCCATAGGTGATGGAGCCAATGATGTCAGTATGATCCAGGTAGCAGATGTTGGCATTGGGATATCTGGCCAGGAGGGCATGCAGGCTGTGATGTCCAGTGACTTTGCCATCTCCAGGTTTAAACACCTCCGCAAGCTGCTGTTGGTCCATGGTCACTGGTGCTACACACGCCTGGCAAACATGATTCTCTACTTCTTCTACAAGAATGTGatgtatgTTAACCTGCTGTTCTGGTACCAGTTCTTCTGTGGATTCTCGGGGAGTGTTATGACCAACTCCTGGGTGCTCATCTTCTTCAACCTCCTCTTCACCTCTGTCCCTCCCCTTCTCTACGGGATCCTGGACAAAGACGTGTCTGCAGACACCCTCATTAAGTTACCGGAGCTCTACAAATCTGGACAGAATTCCAAGGCCTACCTCACTTCTACCTTCTGGCTGACAATGCTGGACGCTATTTACCAAAGCCTTGTCTGTTTCTTTGTTCCTTACTTTGCATACGCAGGGTCGGATGCAGACATGCTCTCCTTTGGTTCTCCCATCAATGCCTCGTCCCTCCTCATTATCCTACTGCACCAGGTCATCGAGAGCCGCACACTGACATGGCTACATGCATTATTGCTGATGGGTAGTGCTCTCTTCTACTTCTCTTTCACCCTGGTcttcagtgtggtgtgtgtgacgtGTAGCCCCCCCAACAATCCCCTTGGTGTGGACAAGCTACAGATGTCCCAACCACTCTTCTACGGAGTGTGTGCCCTCACCACCATGCTGGCACTGCTACCAAGGTTCCTGTTCCAGGCCCTGCACAACAGCATTTGCCCCTCTGACACAGTGAAGGCTGCTCTGATGGACCAGCTCAATCCAGATGACTACTGTAGAAGGATGCAGCGCTGGAACCAGACCCAGGCCCAGAGTAAAACCAGAAGTCTCGTCATCAACGTGGAAGATTCAGACATCAAGGTCCCTGACCCTGACTTCAGACTCCCTTCAGAGCTGAAGGAAGGCAGTGCTACCACTGGCTCTTTGCTCTCCTGACCTCACAGAGGCTACAGGGGGTGgctaccacaggaggctgctgaggggaggatggctcataataatgtctggaatggagtgaatggaatgggatcaaccacatggaaaacatgtttgatatgttccatacCATGCATTAATTAGGTTCCAGCCATTACTTTGAGCCTGTCTTacccaattaaggtaccaccacCTGTGGTGGCTACAGGGGGAGGCTGCAGGGTTCAACCCTAACACCCTTCAAAACTAGCTGTCTTGCATGGGTTGCTCACTGATGATGATGGTTAAGAACACCATGCTGTCTATCCATGGGAAAGAGATGGATATGTTTCTCACATGTGCCTAGAGTTGCATTAACATGGAGTCATGGATGTATAGCCTCTCCTGGTACTTGAGAAAAGATTGGTGATGTGGactttttgtattttttcttatgtaacctttaattaaccaggcaagtcagttaagaacaaatttttatttacaatgacggcctacaggtGAATATACCGAATCCACACAAGTGCGTCGAGGGTAAAGACACATTAGACATTCATAAATGTGTCTCTGCAGTACGCTAGTACTTTGACACAATCAGGTGTGAGGCATAGTGCACTACACCCAAACATTCCGCAAGGCGTGGTCCATTCTGGTCCTCTTCAGAGTGCTCTGAGCATGTAGGGAACAGAATGCTAGTAGTTATCATAGGCTTAGTCCCCAGTAGCGAGCTACTCTCATAAGAATGCATATAGGTTGATTTAGCGACTGTTTAACTCCTCATCCTGTCACCAAGTTATGAATGGGAGCTGTGAAACAATTGTTATGTGACGTGAAGGGTGACAAGTTTCTTTTATTTTCATTCTCTTTTTTCATGAAAACATATGTACTGTACTACACTGGTTACATTCCTCTACTGAATCATGTTATGCAATCCCAGGTAACGTGAAGGAATATTTGAATGTTCTTTTTTCTGTCATTTACACTGCTTGGTTGAGAATTGGTGAAACGATATGCTGGAGTGTGTGCAATGTTTGGAATGTGTTTACAATCCTTGAGCTGCGTACACTTCTTTGTAAAGTTAGCATCAAGCTATGACTCGTTTTGTGTTTACGCACATCTCTTTGTTGTTGGTGTTTCTTAAACAAACACACCAAAATGAAATTGTGAACAACACATATTATTGCATATGAACCGGGGAGACGGGGAGGTCACATAGAGTACCaaagtcataatacccataaaatggttccaatcgtttttccgcCCTTCATTTTTCTCATAGGAGATTTtacaaacacttaaaataagagCTGTGTTTCACGTCACCCTggtgtgatgttttgataactgtgtaaatctctctaggacaacaAGTGActttttatcaatatattcacatgTATTTACTTcccaaaaatgaaatgctaattagttgctaatgtggctatcataaagagcTACAAATGCCATGGTGATCTGGATTAACTATCTGTCAGCTAAATTTAGTATTGAATAAATTGGttacatttatttatatttacaattctgtgaactgCCGTGTGCAAGTTTTAATTAGCATTTTGGAATGTGAGAGTAAATAGAgatgaatatattgataaaagtcaccttgtcggagagatttacatggttatcaaaccgtcacaccagggtaagcttAAACAAAACACAATCCTTATTTTAAGCGTTTCTAAAATTCCCCATGGGAAAAATAAATGGTGGAAAAACTTTtcaccgctaggttttatgggtattatgacaccccAATGCAGAGCTCTATAGTTGGGCAAAATCCAAATGCTGTACAGTGGCCTTACCCTCCTAACTACTGATCTCTGTGGCGTGTGTAGGTGATAACAGTATATAAATGTATGAATCACACTTGAATCTATTTTGACAGGAGTTTACTTGGATTTGGCATGGACCTGACATTTCCCACCACTATTACCTACCAACCCGCACTTAGCTGTAGTCATGTTCGGTAAAGGAGCCTTGAAGTCCATTTAAACATGGGCTgtattgatttatttaacctttattttctTATTGAGGTacaatctctttttcaagagagacctggcCAAAGGGCAGCATACGTTTAGTTAGAAGACAAGGACCAAATGCAATGTAAATTTACACACTGGAAATTGAAAATGTAATGTGGGAAGATGATAGAGATCCTGGGGCTTCTAAAGCAAGACAACCAAAAGTGCAACTTAATAGGCTTAAGTACAGGAAGAGGGTTCAGATATGGCCCTCCTGTATGTGAAGTAGGCTTTACAAATGTTCTCTTGAGTTTGCCTGGACAATGCCATTGCCATTTATATCTGCTTCTGAGAAGTGACCTCAATGCAACTGCCTCTACCACATGCAAATCTTCTTTAGATCAATTAATCCTCAGTATTTTATGTGGTTAAATTAGACTCTTTTTTAAAAATCGTTTTTTACAGTAAAATCCTGCTTGTCAAATCCTACGCAACATGGAAAAGGCAGCTGATTTGACCTATAGTGAAATTGTAAAAGCGATGATTATAAATTAGTTGTGAACTTGTTTATAATAAAATCATTATTTTATATCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K01530 E7.6.2.1; phospholipid-translocating ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954749.1 True 7608 mRNA 0.48 20 38654186 38674247

Neighbor

gene id symbol gene type direction distance location
dapp1 dapp1 coding downstream 153 38645382 ~ 38654033 (-)
LOC118941360 LOC106600306 coding downstream 9226 38640193 ~ 38644960 (-)
LOC110497781 NA coding downstream 39349 38610397 ~ 38614837 (-)
LOC110498572 NA coding downstream 121355 38531785 ~ 38532831 (-)
c19h2orf50 cssa01h2orf50 coding downstream 132712 38517334 ~ 38521474 (-)
LOC110497787 LOC106600539 coding upstream 34971 38709218 ~ 38762160 (-)
LOC110497790 gnpi coding upstream 218142 38892389 ~ 38898821 (-)
LOC110497791 LOC106600514 coding upstream 237034 38911281 ~ 38926911 (-)
lrit3b LOC106600744 coding upstream 261168 38935354 ~ 38939611 (-)
ampm1 ampm1 coding upstream 311550 38985797 ~ 38988755 (-)
G1622592 odc1 non-coding downstream 26258 38626013 ~ 38627928 (-)
G1621664 NA non-coding downstream 110875 38542967 ~ 38543311 (-)
G1621655 NA non-coding downstream 120737 38533203 ~ 38533449 (-)
G1622712 LOC106600528 non-coding upstream 153648 38827895 ~ 38830390 (-)
G1622673 LOC106600519 non-coding upstream 172505 38846752 ~ 38850340 (-)
G1622763 NA non-coding upstream 236035 38910282 ~ 38910570 (-)
G1622764 NA non-coding upstream 236698 38910945 ~ 38911226 (-)
G1622771 NA non-coding upstream 253160 38927407 ~ 38927623 (-)
LOC110497753 spred1 other downstream 1885487 36654523 ~ 36840800 (-)
G1619119 NA other downstream 2248850 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 3257403 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 5174750 33478593 ~ 33479436 (-)
G1615793 NA other downstream 5240969 33412219 ~ 33413217 (-)
G1622757 LOC106600509 other upstream 282777 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 691010 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 721821 39396068 ~ 39411784 (-)
G1623175 NA other upstream 1001192 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 1793097 40467344 ~ 40547622 (-)

Expression


Co-expression Network