ckba (ckb)


Basic Information

Item Value
gene id ckba
gene name ckb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 39550499 ~ 39561200 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573123.2
CAATGGGAGCCGAGTTCGCCTACTATAAAGAACCATCTCCAAGACCATTTTCTTCTACTGGAGAACCAAATAACGTTGGTGATTTCGCGTCACGGTCGGAAAAATAGGGATCTTTGTGTCTTCccctagtagtagtagtgaccAGCCTCGGCAGCAGGGATCAGCCATGCCTTTCGGAAACACCCACAACGTGCTAAAGCTGAAGTATGCTTCTAGTGAGGAGTACCCAGATCTCAGCCAGCACAACAATCATATGGCCAAGATCTTGACTCCTGCCATCTACGAGCGTCTAAGGAGCAAACAAACGCCCAGTGGATTTACATTGGATGATGTCATTCAAACCGGGATTGATAACCCAGGCCATCCCTTCATCATGACTGTGGGATGTGTGGCTGGAGATGAGGAGACGTACGAGGTCTTCAAGGAGCTGCTGGATCCCATCATTGAGGACAGACATGGAGGATACAAGCCTACAGACAAGCACAagactgacctcaacccagacaaCCTGAAGggtgGAGATGACCTGGACCCCAACTATGTCATTAGCTCCCGTGTCCGAACAGGCAGGAGCATCCGTGGGTTCTGCCTGCCCCCACACTGCAGCCGTGGAGAGCGAAGGGGTGTTGAGAAAATGTCAGTCGAAGCTCTGGACTCCCTGTCTGGTGACCTGAAGGGGAAGTACTATGCCCTGAAGAACATGACAGATGCTGAGCAGCAGCAGCTAATTGATGACCACTTTCTGTTTGACAAGCCTGTGTCTCCTCTGCTGCTGGCCTCTGGCATGGCCCGGGACTGGCCTGATGGCAGGGGTATCTGGCACAATGATACCAAGACCTTTCTGGTCTGGGTCAATGAGGAGGACCACCTGCGTGTCATCTCCATGCAGAAGGGTGGCAACATGAAGGAGGTGTTCAACCGTTTCTGCACTGGCCTCACAAAGATTGAAACCCTGTTTAAAGATAAGGGCACTTCATTCATGTGGAATGAGCACTTGGGCTACGTTCTCACCTGCCCATCCAACCTGGGCACAGGGCTACGTGCTGGAGTCCACGTCAAGATCCCCAACATGAGCAAGCATGCCAAATTTGAGGAAGTGCTCAAGAGGCTAAGGCTCCAGAAACGTGGAACCGGTGGGGTGGACACCGCAGCTGTGGGTGGCACCTTCGACATCTCCAACGCAGACCGCCTGGGCTTCTCTGAGGTGGAGCTGGTGCAAATGGTTGTGGACGGTGTCAAGCTGCTGGTTGAGATGGAGAAGAAGCTGGAGAAGGGACAGTCTATTGATGACCTCATGCCTGCCCAGAAGTGACACTCTTGATTGCCTCCCccttgtcatctgaatgacatccTGGAATGCACTCTGTAATAAACAGCACTTACTCTCTTACAAGACACTCTCATTGAAAGAGGACATCTGAAAATAAAAACTGTTTCTTCCATG
>NM_001124715.2
GACTGCCTCCACCTAAGAACAGCCACAACCATGGAGAAAATCAATGATAAAATGGCTAAACTGACCATCAAGAGGCTGTCACCCGAGGAGGAGTTCCCTGACCTAAGCCAGCACAACAACCACATGGCCAAGGTCTTAACCCAGGACATGTACACCAAACTCCGAGACCGTGCCACCCCCAACGGCTTCACCATAGATGGTGTCATTCAGACGGGGATTGATAATCCTGGCCATCCCTTCATCATGACTGTGGGATGTGTGGCTGGAGATGAGGAGACGTACGAGGTCTTCAAGGAGCTGCTGGATCCCATCATTGAGGACAGACATGGAGGATACAAGCCTACAGACAAGCACAagactgacctcaacccagacaaCCTGAAGggtgGAGATGACCTGGACCCCAACTATGTCATTAGCTCCCGTGTCCGAACAGGCAGGAGCATCCGTGGGTTCTGCCTGCCCCCACACTGCAGCCGTGGAGAGCGAAGGGGTGTTGAGAAAATGTCAGTCGAAGCTCTGGACTCCCTGTCTGGTGACCTGAAGGGGAAGTACTATGCCCTGAAGAACATGACAGATGCTGAGCAGCAGCAGCTAATTGATGACCACTTTCTGTTTGACAAGCCTGTGTCTCCTCTGCTGCTGGCCTCTGGCATGGCCCGGGACTGGCCTGATGGCAGGGGTATCTGGCACAATGATACCAAGACCTTTCTGGTCTGGGTCAATGAGGAGGACCACCTGCGTGTCATCTCCATGCAGAAGGGTGGCAACATGAAGGAGGTGTTCAACCGTTTCTGCACTGGCCTCACAAAGATTGAAACCCTGTTTAAAGATAAGGGCACTTCATTCATGTGGAATGAGCACTTGGGCTACGTTCTCACCTGCCCATCCAACCTGGGCACAGGGCTACGTGCTGGAGTCCACGTCAAGATCCCCAACATGAGCAAGCATGCCAAATTTGAGGAAGTGCTCAAGAGGCTAAGGCTCCAGAAACGTGGAACCGGTGGGGTGGACACCGCAGCTGTGGGTGGCACCTTCGACATCTCCAACGCAGACCGCCTGGGCTTCTCTGAGGTGGAGCTGGTGCAAATGGTTGTGGACGGTGTCAAGCTGCTGGTTGAGATGGAGAAGAAGCTGGAGAAGGGACAGTCTATTGATGACCTCATGCCTGCCCAGAAGTGACACTCTTGATTGCCTCCCccttgtcatctgaatgacatccTGGAATGCACTCTGTAATAAACAGCACTTACTCTCTTACAAGACACTCTCATTGAAAGAGGACATCTGAAAATAAAAACTGTTTCTTCC

Function

symbol description
ckb Enables ubiquitin protein ligase binding activity. Involved in substantia nigra development. Located in cytosol.

NR:

description
PREDICTED: creatine kinase B-type isoform X1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004111 creatine kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573123.2 False 1444 mRNA 0.52 8 39550499 39556400
NM_001124715.2 True 1311 mRNA 0.53 8 39550502 39561200
Loading

Neighbor

gene id symbol gene type direction distance location
si:dkey-196h17.9 LOC106586342 coding downstream 47199 39498620 ~ 39503300 (-)
si:dkey-229e3.2 LOC106599591 coding downstream 179868 39365257 ~ 39370631 (-)
LOC110497802 LOC105031663 coding downstream 264732 39278696 ~ 39285767 (-)
LOC110498575 LOC106599699 coding downstream 272065 39276243 ~ 39278434 (-)
cdc5l LOC106599718 coding downstream 286619 39242198 ~ 39263880 (-)
LOC110497819 bag5 coding upstream 29141 39590341 ~ 39605843 (-)
LOC110497823 LOC106599217 coding upstream 128358 39689558 ~ 39692818 (-)
syne2b LOC106599102 coding upstream 393926 39955126 ~ 40097979 (-)
kcnh5b LOC106599078 coding upstream 550516 40111716 ~ 40194268 (-)
LOC110497830 LOC106599033 coding upstream 640556 40201756 ~ 40235731 (-)
G1623106 LOC106610955 non-coding downstream 19215 39530860 ~ 39531284 (-)
G1623038 LOC106586451 non-coding downstream 145848 39400240 ~ 39404651 (-)
G1622987 NA non-coding downstream 223769 39326289 ~ 39326730 (-)
G1622936 NA non-coding downstream 329581 39220683 ~ 39220918 (-)
G1623130 NA non-coding upstream 13481 39574681 ~ 39575099 (-)
G1623129 NA non-coding upstream 90531 39651731 ~ 39652207 (-)
G1623128 NA non-coding upstream 93469 39654669 ~ 39656645 (-)
G1623154 NA non-coding upstream 106355 39667555 ~ 39670662 (-)
G1623175 NA non-coding upstream 114239 39675439 ~ 39681529 (-)
G1623037 LOC106586451 other downstream 138715 39396068 ~ 39411784 (-)
G1622757 LOC106600509 other downstream 591525 38957024 ~ 38958974 (-)
LOC110497753 spred1 other downstream 2781800 36654523 ~ 36840800 (-)
G1619119 NA other downstream 3145163 36401554 ~ 36405336 (-)
LOC110497838 trmt5 other upstream 906144 40467344 ~ 40547622 (-)
G1624738 NA other upstream 1068565 40629765 ~ 40630208 (-)
G1624737 NA other upstream 1069378 40630578 ~ 40631738 (-)
LOC110498350 NA other upstream 1134275 40689096 ~ 40699267 (-)

Expression

ckba(ckb) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 750.
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ckba(ckb) Expression in each Bioproject

Bar chart with 21 bars.
ckba(ckb) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30000.
End of interactive chart.

Co-expression Network