LOC110497852


Basic Information

Item Value
gene id LOC110497852
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 40789591 ~ 40804305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469722.2
tccgaatggcacacacaatccatgggctgcggtccaaacacttaaGACACCCTCGTCCACTTACCCTCGCTTAATGCCCTTATGGTGAAGGGGATTTCCCTCTTGATGGGCGGTCCAAATGATtcgccaagcaagggaagttcgcaacgtaagcccctcagccctcgtttttagtCAGCTTcgcgagtgtacaattatgtacACTCCGGGGCCTGAAACTCCCCACAATTCAATTTGCGACGATTGTACATGCGCTAAGAAGTCTGCGAAAACTTAAACatcaatggagaagtcaacatacaagtaacattggaaagctggtggttccttttaacatgagccttcactattccaaggtgctggagtacagagccaaaacaacaagaaGTGTCACTGTCCCagtacttttggagctcactgtatctcTGTTATCAGATTCAAAATCTGGCAGTTGCTCAATGTAGCATGACCAAGTAACCAACAGTGGTGACACTGACTCGATTAAAGTGTTTGTGCGGGTGAGACCTCTGATCCATGAGACCAGCCTAACCACTGATGGATACCAAGGTCTCTGTCACCTCTCCGAACACCCTCTGCCTGCACATCAAGCCGTTGCGCGGACATTCACCTATGACCATGTTGCTGATGTGGACGTCACTCAGGATTCTGTATTCCCGAGGTCTGTCTGATTGCGACAACTTTCACTGATGACCAACAGGGGGGGAGTACCTGTTGTTCCTCATCAGCAAGGAGGTCGAAAGGTCTGGAAAGGCCAAGAGCTTCCTGTGCAATCGCTCCTTCATTGAGATCTACAACGAGCAGGTTTATGATCTGCTGGACAGCGCTTCAGCCAACCTGTTCCTCAGAGAGAACATCAAGAAGCGGGTGTTTGTGGAAGGGGCTGTAGAACATTTTGTCACTTCAGCTGCTGAAGCTTACCAGGTGCTGTCAATAGGCTGTGGCGTGTAATAGGCGTGTGGCTTCTATCTCCATGAACAGGGAGTCATCGCGGTCCTATGCAGGCTTCACCATGACTCTGCAGTCCAAGGAGGCTGCTGGAGGTGGTGAACATCTGCACATCCCAGCTGAACTTGGTGGACCTGGCTGGgttggagaggcagagagagagacacacacacacacacgcacgcgcacacacacacgcacacacacacacgcacgcacacacacacgcacacgcacacacacacacacacacacacacagagggttcCAGACTCAAGGTGATGCAGGAGTACTGTCCGCTGACTGAACATTCACAGCACACAACAAACCCTTTAGAAGGCTAATTTCCACCGTGAATCTGTTATTGTGTATACTCATTTGTTATATTTTTATCACTCCTCTGAGATCaaccccctcttttctcctctttcaAGAGGCAAGCAGCATCAACCACTCCCTCGTGATCATGGCACTGGTGGATGAGTCCAATGGGAAGAGCAGGCATATCTGCTACAGGGACTTCAAACTCCCCTTCTTGCTTTGGGACTCTCTTGGATATAATGCTAAGACCTAGATTATAGCCAATGTGCACCCAAGTGCTTTGGGGAAACTGAAATCAAAACAAGGCCCTGATCAACGAAGACATGCATGGGAACGTGAGGCAGCTACAGGCTGAGGTGGGAGTGGGAGCAGCCCCTGGAGCAGCAGCGGTCCCTGCAGGATGCCTTTGACCAGATCCATGCCGAGGCCAAGTTTGAGGCAGACCAGTCCAGGCAGCAGCTAGAGGACAACCAGCAGGACATCATAGCTCAGCAGGCCCAAATCAATGTCAGTCAGCTCCTTTTTAAACCAACCAAGCCCGCTTCTCtgttaaggacattcagagcctACCTGTCTCATTTGTATGACATTACAGTTTAACCCCTATGGAGGATTGAGTGTGATTAGTTTTTATTGATGAATATGTTGGTTGAATTGTAGGAATTGACAAAAGCTCTTCAGTCTGAAAGAACACACAAACCAATATGACCCCCCATTtgagagaggctagagagagcACTTTAGAGTGAGTTGTATAAAGGCATATTTTCTATTTGTGCATGATGAGACCTTTTTGAAGtgtattttaaatgttttgttgacatGTTTGATTTGTTTCTCCCTAGAGAGCTTGTTCAGAATATGGAGCAGAATGTAGTGCTAAAGAAGCAAGTGTCTGACTGGACTACACAAAACCAAAAACAAACCTGTCATTCATTCATTGTTATTGTGTACatggtggttaatgtagtgttttatttatatttcttAGAAATTGTTATCTCTAGTATGTGTTTTTAGTTTTGTCAAATACAGGTGAACTATTTGACATAATTGGATCTTAATCGCCAATCAACTGTAATTGGCCCGGCCTTTGTTTGTATTTTTACTTTGAAAGACTTCTAATATGGCAAGCCTTGAACCAAATCTGACAACTGCCAATGGGACCATATCCAGCCTTGAGAAAAACTGATCAACCAGTCCAGGGACCTCTGCAGTAAGCTGGGCCAGAAGGATCAGGGCCTTGCCATGCTGTCTGCAGGTGTCAAGGACCTTACGGATATGTACAATCTccttagccgatgtgagcaagacttttaaacaggtgaACATTCACagaccaggacgtgtactcagagcatgcgcggaccacCTGG

Function

NR:

description
kinesin-like protein KIF15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469722.2 True 2663 mRNA 0.47 12 40789591 40804305

Neighbor

gene id symbol gene type direction distance location
tdrd9 LOC106598466 coding downstream 1190 40757564 ~ 40788401 (-)
LOC110498350 NA coding downstream 90324 40689096 ~ 40699267 (-)
LOC110497845 LOC106598670 coding downstream 114635 40666686 ~ 40674956 (-)
LOC110497844 LOC106598722 coding downstream 146212 40619452 ~ 40643379 (-)
LOC110497843 LOC106598791 coding downstream 201109 40585928 ~ 40588482 (-)
LOC110497850 LOC106598245 coding upstream 7134 40811439 ~ 40857717 (-)
LOC110498351 LOC106598081 coding upstream 54367 40858672 ~ 40920155 (-)
LOC110497855 LOC106597482 coding upstream 146651 40950956 ~ 40959546 (-)
LOC110497858 chmp3 coding upstream 156063 40960368 ~ 40965227 (-)
LOC110497861 LOC106597151 coding upstream 189698 40994003 ~ 41033626 (-)
G1624817 NA non-coding downstream 108180 40681143 ~ 40681411 (-)
G1624781 NA non-coding downstream 194502 40594832 ~ 40595089 (-)
G1624780 NA non-coding downstream 195327 40594043 ~ 40594264 (-)
G1624923 NA non-coding upstream 100333 40904638 ~ 40905362 (-)
G1624954 NA non-coding upstream 165228 40969533 ~ 40969797 (-)
G1624936 NA non-coding upstream 246001 41050306 ~ 41051596 (-)
G1625032 NA non-coding upstream 316546 41120851 ~ 41122447 (-)
G1625067 NA non-coding upstream 392340 41196645 ~ 41196974 (-)
G1624737 NA other downstream 157853 40630578 ~ 40631738 (-)
G1624738 NA other downstream 159383 40629765 ~ 40630208 (-)
LOC110497838 trmt5 other downstream 241969 40467344 ~ 40547622 (-)
G1623175 NA other downstream 1108062 39675439 ~ 39681529 (-)
LOC110497863 LOC106596965 other upstream 265458 41052866 ~ 41080347 (-)
LOC110497865 LOC106611002 other upstream 339802 41144107 ~ 41162883 (-)
G1625066 NA other upstream 390128 41194433 ~ 41194759 (-)
G1625428 arf6 other upstream 1041950 41846255 ~ 41850433 (-)
G1626105 NA other upstream 1450930 42255235 ~ 42255797 (-)

Expression


Co-expression Network